MSTRG.11414.1.p1 (mRNA) -

Overview
NameMSTRG.11414.1.p1
Unique NameMSTRG.11414.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000082_pilon:1188908..1191549-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11414.1.p1 ID=MSTRG.11414.1.p1|Name=MSTRG.11414.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2642bp|location=Sequence derived from alignment at sc0000082_pilon:1188908..1191549- (Clytia hemisphaerica_ch_hm2_pilon)
TAGAATAACAACTGTCGCAAAACATGTGCTTATTTTGATACATCAGTCGG
GTCGACAGTGGGTGGCTGTGGTTTCGCACAATAAAACGATTCAGGAATGG
ATCTACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGCTTCAAATA
ATATTGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTTTCAGTTGG
CTTGACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAAAAGTAATC
GTTACTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTTCAATGTTG
GACGAAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCAGCTACTAT
AGACCCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGTATTCGTTG
TTGCTGATAATACAATATACAGACGATTTGATAACGATTCACAAAAATTA
ACTGACCATATACACGAGATTTTTCATATGGTAGATACAATGTATCGACC
TTTAAATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTCGGATCATG
ATCAAATAGAATTCTCTTTTACGGAGGAACCTTATATGAATCTTATACGT
TTCAATAGTTACGTCCAGAACCGATCAGAAAATTACATGATGGCTGATCA
TGTACATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAACATTGGGT
TATCTCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGGCCTTTACA
GTAAACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTGGCTCACGA
AATTGGTCATGATCTTGGTATTTTGCACGATAGACCAGGATGCCAATGTA
ATGAACCCATAGAAAATAATACTTGTATAATGTCGACAGCTTCGAAAGGT
TTTGAACCATTACCTCGTTTGTTTACTGACTGTAGTTACAATGATATGGT
GCAATACTATCTATCAACATATAAACCAACATGTTTATTCAATGTACCGA
CAGTTACCACTGACGTTACCTCTGCATGTGGTAATAACATCTTAGATGCT
GGAGAAGAATGTGATTGCGGACATCCTTATTTCTGCACCAATCCTTGCTG
TAATCCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTACGAAGGTG
GATGTTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTTGTCGGACA
ATGTTAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGAAGCTCTCA
CGTTTGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGAACAAGGTG
GGATGTGTTATAAAGGACATTGTCAATCACACGCGTCTCAATGTCAAATG
ATTTGGGGAGCCGACACTACTGAAAACGGACACAGTGAATGCTATAATCT
TAACAAGAGAGGTTAGTATGTAAAGATAGAAGGGAAAAGAAGATAGCTAG
GTATTTATATCAGTCAGGCGCAATCAAACAAAATTTTAGTCTACGCAAAT
AAACAACTCTAGGCTTTCTTGCCTTTTCAGAGTTTTATGCTTAGAGCAAA
GGAGATACAGCTTTCAAAATTGATTTTGATGATATAGATGAAAGCCCACT
TTTCAATTAATACCATGATTAGAATTTGAATGTTAAAAAGTTTAAGTGAG
AGAAAAGAAAGCGGTTGAAATCATTTAACATTTCGATACAATATTGCAGG
TGATTGGTATGGACATTGTGGGTCAAGCCCTGGTGATTACAGTGCATGCG
CAGATCAAGATGTTAAATGTGGAAAACCTTATTGTGCAAACACACCTCAA
GATTATCCAGTTGTTGGATGGAGGAAAGGTGTAGATGTGCTGACTGTCAA
ATATAATGACCAACATACACATCGTTGCCATGTACCAAGAATCACTTTTG
GAAGAAACCAGACTAATGAAAGTAAGAAGGATTTTGTTTTCAAAAAGCCT
AAGATGTCTTTTACCAGAGATTTTATAAGGATTTCTTCCCTTCGAGAACA
AATTTTCAACTGAAATGAATGGAATGGAACAAATGGAATCAAATTCAATT
TCGCAGTTTTCTGGCTTTCTTTTTTTATATTTCAAATCACGAAATGGTCT
TCAGTAATGGTCCATCTGCAAAGTCTAAAATATGCTGTAGATGTTGATTA
AGATGGGAATCCACAGGCACATGTCTAGATTTTAGAAAGAGAAAGCCCAC
AAGTGCACTAATTTCACCATATATTTCAATCAATTCTTTTTTCAGCAATG
GTGCTTGACGGTACACCGTGTGGTACAAACAAAATGTGTCAAAATCAGAA
ATGCATTGAACTTTCAACCTTCCAATCAAAATGTTCTGGCTGTCTGGATT
ATATTGGTAGTTGTACAAACGATGGTGTTTGTCGCTGCCATACTGGCGTC
ACTTCTGATAAGTGTGAGCAGATACACAGTGACTGCATGGCAGTTAACAA
TAACAACAACAATAACGACAATAACGGCAACGGCAACGACGGACGACAAC
TACAACCGATGACGGTCTTCTCACTCACAATGTTCTGGATGACTGCCATT
GAATTGTTATATACGATGATTTCATGAGCAAGATGTACCTGATGTGCATT
ATAAATGATAATAGATGTAATAAAGTCAAATTTTGAAACGAA

Coding sequence (CDS) from alignment at sc0000082_pilon:1188908..1191549-

>MSTRG.11414.1.p1 ID=MSTRG.11414.1.p1|Name=MSTRG.11414.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5607bp|location=Sequence derived from alignment at sc0000082_pilon:1188908..1191549- (Clytia hemisphaerica_ch_hm2_pilon)
CAATGGTGCTTGACGGTACACCGTGTGGTACAAACAAAATGTGTCAAAAT
CAGAAATGCATTGAACTTTCAACCTTCCAATCAAAATGTTCTGGCTGTCT
GGATTATATTGGTAGTTGTACAAACGATGGTGTTTGTCGCTGCCATACTG
GCGTCACTTCTGATAAGTGTGAGCAGATACACAGTGACTGCATGGCAGTT
AACAATAACAACAACAATAACGACAATAACGGCAACGGCAACGACGGACG
ACAACTACAACCGATGACGGTCTTCTCACTCACAATGTTCTGGATGACTG
CCATTGAATTGTTATATACGATGATTTCATGAGTGATTGGTATGGACATT
GTGGGTCAAGCCCTGGTGATTACAGTGCATGCGCAGATCAAGATGTTAAA
TGTGGAAAACCTTATTGTGCAAACACACCTCAAGATTATCCAGTTGTTGG
ATGGAGGAAAGGTGTAGATGTGCTGACTGTCAAATATAATGACCAACATA
CACATCGTTGCCATGTACCAAGAATCACTTTTGGAAGAAACCAGACTAAT
GAAAATGGATCTACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGC
TTCAAATAATATTGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTT
TCAGTTGGCTTGACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAA
AAGTAATCGTTACTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTT
CAATGTTGGACGAAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCA
GCTACTATAGACCCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGT
ATTCGTTGTTGCTGATAATACAATATACAGACGATTTGATAACGATTCAC
AAAAATTAACTGACCATATACACGAGATTTTTCATATGGTAGATACAATG
TATCGACCTTTAAATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTC
GGATCATGATCAAATAGAATTCTCTTTTACGGAGGAACCTTATATGAATC
TTATACGTTTCAATAGTTACGTCCAGAACCGATCAGAAAATTACATGATG
GCTGATCATGTACATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAA
CATTGGGTTATCTCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGG
CCTTTACAGTAAACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTG
GCTCACGAAATTGGTCATGATCTTGGTATTTTGCACGATAGACCAGGATG
CCAATGTAATGAACCCATAGAAAATAATACTTGTATAATGTCGACAGCTT
CGAAAGGTTTTGAACCATTACCTCGTTTGTTTACTGACTGTAGTTACAAT
GATATGGTGCAATACTATCTATCAACATATAAACCAACATGTTTATTCAA
TGTACCGACAGTTACCACTGACGTTACCTCTGCATGTGGTAATAACATCT
TAGATGCTGGAGAAGAATGTGATTGCGGACATCCTTATTTCTGCACCAAT
CCTTGCTGTAATCCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTA
CGAAGGTGGATGTTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTT
GTCGGACAATGTTAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGA
AGCTCTCACGTTTGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGA
ACAAGGTGGGATGTGTTATAAAGGACATTGTCAATCACACGCGTCTCAAT
GTCAAATGATTTGGGGAGCCGACACTACTGAAAACGGACACAGTGAATGC
TATAATCTTAACAAGAGAGCAATGGTGCTTGACGGTACACCGTGTGGTAC
AAACAAAATGTGTCAAAATCAGAAATGCATTGAACTTTCAACCTTCCAAT
CAAAATGTTCTGGCTGTCTGGATTATATTGGTAGTTGTACAAACGATGGT
GTTTGTCGCTGCCATACTGGCGTCACTTCTGATAAGTGTGAGCAGATACA
CAGTGACTGCATGGCAGTTAACAATAACAACAACAATAACGACAATAACG
GCAACGGCAACGACGGACGACAACTACAACCGATGACGGTCTTCTCACTC
ACAATGTTCTGGATGACTGCCATTGAATTGTTATATACGATGATTTCATG
AGTGATTGGTATGGACATTGTGGGTCAAGCCCTGGTGATTACAGTGCATG
CGCAGATCAAGATGTTAAATGTGGAAAACCTTATTGTGCAAACACACCTC
AAGATTATCCAGTTGTTGGATGGAGGAAAGGTGTAGATGTGCTGACTGTC
AAATATAATGACCAACATACACATCGTTGCCATGTACCAAGAATCACTTT
TGGAAGAAACCAGACTAATGAAAATGGATCTACACAAAATCTTGATTTTC
TTGGTCATTTCTCTCTCGCTTCAAATAATATTGGCCGAAGATGACGATGA
TTTTGTTAGGAATGGATTTTCAGTTGGCTTGACCGGAGATTCGATGCCTG
AAATCACTACAAATGTTAAAAGTAATCGTTACTCGTTAGAGAAAGGTCCA
GTTGCTCAGTATTTGAGTTCAATGTTGGACGAAAAGCGGAAGAAACAGGC
TAGTCGTAAACGCCGTGCAGCTACTATAGACCCCATAGCATCATCAAAAA
GAATGTATCACTTAGAAGTATTCGTTGTTGCTGATAATACAATATACAGA
CGATTTGATAACGATTCACAAAAATTAACTGACCATATACACGAGATTTT
TCATATGGTAGATACAATGTATCGACCTTTAAATTTCCGTGTTACCGTCG
TTGGAATAGAAATCTGGTCGGATCATGATCAAATAGAATTCTCTTTTACG
GAGGAACCTTATATGAATCTTATACGTTTCAATAGTTACGTCCAGAACCG
ATCAGAAAATTACATGATGGCTGATCATGTACATCTAATAACTGGTAAAG
GTTTATTCAAAGGTGGCAACATTGGGTTATCTCATTTCGCGACAGTTTGT
TCACCCGATCATGCAACGGCCTTTACAGTAAACTTAATTGCTCCAACTAA
CTTCACAGCAACCGTTGTGGCTCACGAAATTGGTCATGATCTTGGTATTT
TGCACGATAGACCAGGATGCCAATGTAATGAACCCATAGAAAATAATACT
TGTATAATGTCGACAGCTTCGAAAGGTTTTGAACCATTACCTCGTTTGTT
TACTGACTGTAGTTACAATGATATGGTGCAATACTATCTATCAACATATA
AACCAACATGTTTATTCAATGTACCGACAGTTACCACTGACGTTACCTCT
GCATGTGGTAATAACATCTTAGATGCTGGAGAAGAATGTGATTGCGGACA
TCCTTATTTCTGCACCAATCCTTGCTGTAATCCAAATACTTGTAAGTTGA
CTGCTGGTTCTCAATGCTACGAAGGTGGATGTTGTCATGAATGTAAAATT
GCATCCAAGGGTACATGTTGTCGGACAATGTTAGATAGCACGTGTGATTT
ACCAGATGTTTGCGATGGAAGCTCTCACGTTTGTAAAGATACATATAAAG
AGGATCGGACCCCCTGCGAACAAGGTGGGATGTGTTATAAAGGACATTGT
CAATCACACGCGTCTCAATGTCAAATGATTTGGGGAGCCGACACTACTGA
AAACGGACACAGTGAATGCTATAATCTTAACAAGAGAGCAATGGTGCTTG
ACGGTACACCGTGTGGTACAAACAAAATGTGTCAAAATCAGAAATGCATT
GAACTTTCAACCTTCCAATCAAAATGTTCTGGCTGTCTGGATTATATTGG
TAGTTGTACAAACGATGGTGTTTGTCGCTGCCATACTGGCGTCACTTCTG
ATAAGTGTGAGCAGATACACAGTGACTGCATGGCAGTTAACAATAACAAC
AACAATAACGACAATAACGGCAACGGCAACGACGGACGACAACTACAACC
GATGACGGTCTTCTCACTCACAATGTTCTGGATGACTGCCATTGAATTGT
TATATACGATGATTTCATGAGTGATTGGTATGGACATTGTGGGTCAAGCC
CTGGTGATTACAGTGCATGCGCAGATCAAGATGTTAAATGTGGAAAACCT
TATTGTGCAAACACACCTCAAGATTATCCAGTTGTTGGATGGAGGAAAGG
TGTAGATGTGCTGACTGTCAAATATAATGACCAACATACACATCGTTGCC
ATGTACCAAGAATCACTTTTGGAAGAAACCAGACTAATGAAAATGGATCT
ACACAAAATCTTGATTTTCTTGGTCATTTCTCTCTCGCTTCAAATAATAT
TGGCCGAAGATGACGATGATTTTGTTAGGAATGGATTTTCAGTTGGCTTG
ACCGGAGATTCGATGCCTGAAATCACTACAAATGTTAAAAGTAATCGTTA
CTCGTTAGAGAAAGGTCCAGTTGCTCAGTATTTGAGTTCAATGTTGGACG
AAAAGCGGAAGAAACAGGCTAGTCGTAAACGCCGTGCAGCTACTATAGAC
CCCATAGCATCATCAAAAAGAATGTATCACTTAGAAGTATTCGTTGTTGC
TGATAATACAATATACAGACGATTTGATAACGATTCACAAAAATTAACTG
ACCATATACACGAGATTTTTCATATGGTAGATACAATGTATCGACCTTTA
AATTTCCGTGTTACCGTCGTTGGAATAGAAATCTGGTCGGATCATGATCA
AATAGAATTCTCTTTTACGGAGGAACCTTATATGAATCTTATACGTTTCA
ATAGTTACGTCCAGAACCGATCAGAAAATTACATGATGGCTGATCATGTA
CATCTAATAACTGGTAAAGGTTTATTCAAAGGTGGCAACATTGGGTTATC
TCATTTCGCGACAGTTTGTTCACCCGATCATGCAACGGCCTTTACAGTAA
ACTTAATTGCTCCAACTAACTTCACAGCAACCGTTGTGGCTCACGAAATT
GGTCATGATCTTGGTATTTTGCACGATAGACCAGGATGCCAATGTAATGA
ACCCATAGAAAATAATACTTGTATAATGTCGACAGCTTCGAAAGGTTTTG
AACCATTACCTCGTTTGTTTACTGACTGTAGTTACAATGATATGGTGCAA
TACTATCTATCAACATATAAACCAACATGTTTATTCAATGTACCGACAGT
TACCACTGACGTTACCTCTGCATGTGGTAATAACATCTTAGATGCTGGAG
AAGAATGTGATTGCGGACATCCTTATTTCTGCACCAATCCTTGCTGTAAT
CCAAATACTTGTAAGTTGACTGCTGGTTCTCAATGCTACGAAGGTGGATG
TTGTCATGAATGTAAAATTGCATCCAAGGGTACATGTTGTCGGACAATGT
TAGATAGCACGTGTGATTTACCAGATGTTTGCGATGGAAGCTCTCACGTT
TGTAAAGATACATATAAAGAGGATCGGACCCCCTGCGAACAAGGTGGGAT
GTGTTATAAAGGACATTGTCAATCACACGCGTCTCAATGTCAAATGATTT
GGGGAGCCGACACTACTGAAAACGGACACAGTGAATGCTATAATCTTAAC
AAGAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11414MSTRG.11414Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11414.1.p1MSTRG.11414.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11414.1.p1.exon3MSTRG.11414.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11414.1.p1.exon2MSTRG.11414.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11414.1.p1.exon1MSTRG.11414.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082_pilongenomesc0000082_pilon:1188908..1191549 -