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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1100554..1103236+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11407.1.p1 ID=MSTRG.11407.1.p1|Name=MSTRG.11407.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2683bp|location=Sequence derived from alignment at sc0000082_pilon:1100554..1103236+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCAATTTTGGAATAATTATTATCGTTACAGATACCCAGAATAGGTGTAA
CTAGATGTAAGGATTTAAATTCGTTGAATATTTGTGATCAAATCATTGAA
ACTCGATGCTGAAAATGATGGAGAAGTCCTTAATTCGAATTGGAGTAGTT
ATATTTTTGAGTTTAGGTAAGatttccttcttatgtttctcttttatatt
tatttactattttgaattttttatatttcatttggatttGTCTTCATACG
TATCCTCCTCGGATGAGGGcgagaaatttgttttgaacgGATATTACTtc
tcaaatatttcatttttagcatTGACGAAGATCAGCGAGGAAGCTTTAAT
AAAAGAAGCAAATGATGAATTTTGTACCATATCTCCTGTTGGTGTTATCA
ACGGAAAAGTGTCACCTCCAAAACAAATTGTTAGATATGATTCAGGCTGT
ATTTTTTCATTGGATGGAGGTTTTAAGAGAAAAGTAGTGCCAGTGGAAAA
AAGTggagacaaaaatattttggatgccCATCTCAAGAGTTTTACATTTG
TGAGAACAATATTAAATAACACTTCATTCACTGGTCGAGCTGAAATGGAT
TTTTGCTTCACAACACCAACTTCTAAACGGATTTCGAAATTTAACAGATT
TCAATTAGCTTATTTGATTCACACCAAGCGAACAGCTAATTATTGTGAGA
ATGCTGTACGCGTGACATCTAAAAGCACTCGAGGTAAATATGGCGGTTGG
ATTATGATACCCAGAGACTCGGGAACTAAGACCGTCATATCGATAATCAT
GCAATGGCACGGTCGTCCAGATCGACTCGTTTACAAAGATCAGACAGGAA
TTCATGAGCTTAATGACAGCTTACCTTCAATAACAAATTATGTGAGTTTG
ACACGAGCAATAAATACTTACAATAATGTTTTAAGAGATGGTGGAAAATT
TGATCAAGGAGGATACCCACCACTTTCAGTGTGGATATATAAGTACAATC
TTGTAGTGTTGGCGCGATACGATAATCGAAAATACGATGATAAGTCTATT
CGATGTGAGGCTGACTATGCAACAATCCCACTCAATAAACCTAAAAAATG
CTTGGATAAGTTGACTGAGAagttatttttgacagtaaTTCATCGAGAAC
CATTACATAATTGGATTGATAAATGGAACCATCTGAAATTGACAATCGAT
TGGCGCCCGATCGGCGTAAATAGTTCTGTATCAATCTTTAAAAATGGTAG
GAAAGTTAAATCATGGGAAGGATTGCTTGGAAGACATGATAAAAATGGAC
CGTATATGAAATATGGCATTTACGCAAAtaaatattccaaaaatttcaaa
ttgaaagtAGCTTATGCTTTTTCAGATATTGATAATTAAACTCCGGTAAT
TGAATTTGTTGATAcagttgcttttttaaaaagctgataataaCATAAAC
TCTAACCCGACTGGCGTGGCTTGGACAGTTCTTGACAAAAAGGTTTTAGT
TCTGGACATTGACAAAGTGTCGTATTATGAGGAATATCACGACAAACCGA
AGACTAATGAGCGCGTTTTATATTTTACAAGGAATTCATATATTTTCAAG
aactaaaaaaacaatataaaaacgaaaagaattgtagtaacaatttaata
aacaaaattaaaagtgactattcgtataaaaataactgaaaaatcaataa
aaaaattaaatttttgggaatataCTACCTATGCTTTTTTAAATGTATGT
GgataaaatataaagaaaactAACTTACGTAAATTACAGAGTGattaatt
cttgatatgcgtaagtcaaaatgacgtcatattttttaacggaagcaccc
aaaaaagccggtttaTGACCttcgtgtttctatttttagtaggAAAGAGG
GGttaaatcccggcttttttaggcTGTTTCCGCTAGAataatgacttacg
catatcaagaataaatgATGCGCTAACAATCATTGAGTTGAAAGCCTCGA
AGGGGCTAGACTGTAGTCTTTCTGATTATTTGTGCcgtttttaactttcg
ttttcaaaaatcatacaGAAACATCCGGCCCATGaaatatattctaaaac
ccCATCAAAGTTTCTGAAACTatgataaaaacataaaaatacctcctaaa
ttaaaaaaaaggtcaattgataatggttttctgtttgtttttcttcaaaa
agcgACTGTATCTAGTGGTATGGATTTCCTACGTGCTCTAGCAAAGTCGA
AAGAAATAGAGTCTGCCAAAATACACCGGGCAACTTCTCAGCGCAAACAA
GTCTCAAAAAATCTATAAGTAGCCCTCGGGCTAGAGAAGAATCGTTAACC
TTTCTccagcaagaaaaagtgaagcccaTTTTCCATTATCAAGGTCAATG
GAATAACTGACAACTACAGTAATTCAATgattcattttatcattggtATA
TTATCAAATTATTATCAAATGGCATACGAAATAAGCAACAGGTAAGTCGA
AAACCAGGCTAAATGATCATCAGTAATAATATATCGTATtcatggctccg
aatggggttctaggtccccccaacaaatttaggtcccccccTAAGTTTTA
GGTGCCCCCACTTTTCAGTAAGCTTCAGGTCCCAGTTGAAATCTGTGTAC
CACCCCCTCTCGCACGCAGATAAAAATAAAACG Coding sequence (CDS) from alignment at sc0000082_pilon:1100554..1103236+ >MSTRG.11407.1.p1 ID=MSTRG.11407.1.p1|Name=MSTRG.11407.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000082_pilon:1100554..1103236+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGAAAATGATGGAGAAGTCCTTAATTCGAATTGGAGTAGTTATATT
TTTGAGTTTAGcatTGACGAAGATCAGCGAGGAAGCTTTAATAAAAGAAG
CAAATGATGAATTTTGTACCATATCTCCTGTTGGTGTTATCAACGGAAAA
GTGTCACCTCCAAAACAAATTGTTAGATATGATTCAGGCTGTATTTTTTC
ATTGGATGGAGGTTTTAAGAGAAAAGTAGTGCCAGTGGAAAAAAGTggag
acaaaaatattttggatgccCATCTCAAGAGTTTTACATTTGTGAGAACA
ATATTAAATAACACTTCATTCACTGGTCGAGCTGAAATGGATTTTTGCTT
CACAACACCAACTTCTAAACGGATTTCGAAATTTAACAGATTTCAATTAG
CTTATTTGATTCACACCAAGCGAACAGCTAATTATTGTGAGAATGCTGTA
CGCGTGACATCTAAAAGCACTCGAGGTAAATATGGCGGTTGGATTATGAT
ACCCAGAGACTCGGGAACTAAGACCGTCATATCGATAATCATGCAATGGC
ACGGTCGTCCAGATCGACTCGTTTACAAAGATCAGACAGGAATTCATGAG
CTTAATGACAGCTTACCTTCAATAACAAATTATGTGAGTTTGACACGAGC
AATAAATACTTACAATAATGTTTTAAGAGATGGTGGAAAATTTGATCAAG
GAGGATACCCACCACTTTCAGTGTGGATATATAAGTACAATCTTGTAGTG
TTGGCGCGATACGATAATCGAAAATACGATGATAAGTCTATTCGATGTGA
GGCTGACTATGCAACAATCCCACTCAATAAACCTAAAAAATGCTTGGATA
AGTTGACTGAGAagttatttttgacagtaaTTCATCGAGAACCATTACAT
AATTGGATTGATAAATGGAACCATCTGAAATTGACAATCGATTGGCGCCC
GATCGGCGTAAATAGTTCTGTATCAATCTTTAAAAATGGTAGGAAAGTTA
AATCATGGGAAGGATTGCTTGGAAGACATGATAAAAATGGACCGTATATG
AAATATGGCATTTACGCAAAtaaatattccaaaaatttcaaattgaaagt
AGCTTATGCTTTTTCAGATATTGATAATTAAATGCTGAAAATGATGGAGA
AGTCCTTAATTCGAATTGGAGTAGTTATATTTTTGAGTTTAGcatTGACG
AAGATCAGCGAGGAAGCTTTAATAAAAGAAGCAAATGATGAATTTTGTAC
CATATCTCCTGTTGGTGTTATCAACGGAAAAGTGTCACCTCCAAAACAAA
TTGTTAGATATGATTCAGGCTGTATTTTTTCATTGGATGGAGGTTTTAAG
AGAAAAGTAGTGCCAGTGGAAAAAAGTggagacaaaaatattttggatgc
cCATCTCAAGAGTTTTACATTTGTGAGAACAATATTAAATAACACTTCAT
TCACTGGTCGAGCTGAAATGGATTTTTGCTTCACAACACCAACTTCTAAA
CGGATTTCGAAATTTAACAGATTTCAATTAGCTTATTTGATTCACACCAA
GCGAACAGCTAATTATTGTGAGAATGCTGTACGCGTGACATCTAAAAGCA
CTCGAGGTAAATATGGCGGTTGGATTATGATACCCAGAGACTCGGGAACT
AAGACCGTCATATCGATAATCATGCAATGGCACGGTCGTCCAGATCGACT
CGTTTACAAAGATCAGACAGGAATTCATGAGCTTAATGACAGCTTACCTT
CAATAACAAATTATGTGAGTTTGACACGAGCAATAAATACTTACAATAAT
GTTTTAAGAGATGGTGGAAAATTTGATCAAGGAGGATACCCACCACTTTC
AGTGTGGATATATAAGTACAATCTTGTAGTGTTGGCGCGATACGATAATC
GAAAATACGATGATAAGTCTATTCGATGTGAGGCTGACTATGCAACAATC
CCACTCAATAAACCTAAAAAATGCTTGGATAAGTTGACTGAGAagttatt
tttgacagtaaTTCATCGAGAACCATTACATAATTGGATTGATAAATGGA
ACCATCTGAAATTGACAATCGATTGGCGCCCGATCGGCGTAAATAGTTCT
GTATCAATCTTTAAAAATGGTAGGAAAGTTAAATCATGGGAAGGATTGCT
TGGAAGACATGATAAAAATGGACCGTATATGAAATATGGCATTTACGCAA
AtaaatattccaaaaatttcaaattgaaagtAGCTTATGCTTTTTCAGAT
ATTGATAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:1100554..1103236 + |
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