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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1006349..1010180+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11402.2.p1 ID=MSTRG.11402.2.p1|Name=MSTRG.11402.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3832bp|location=Sequence derived from alignment at sc0000082_pilon:1006349..1010180+ (Clytia hemisphaerica_ch_hm2_pilon)
CGCCATTATCAGTGCTACAAGCTCTAACCGCAAACACAAGCAAGCACAAC
AATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAG
GAGCCATAAACCGACTAAATGGTAAGTCTTGTGTTATTTTTACAAAGTCC
ACTGGTTACTGGATTGGAGAGATATGGTTGGAGGTTTTTTGTCAGCTTGT
CTTTTTTGCACGTGTGCACCACTGTAATTATAGACAGATTCTTGATGACa
tcatttgtttacattttgtttcaaattgCCTGCTCagattacacattttt
ttctttattagcagCTCTAATTTTGGCTATTGTTTGCATTGGTTAGGCAG
GCCCATATCAGcatattgattgttgttgttTGGTTCGTGTCAAATCCCAA
TGTTAAGGGCCCATTCACAACTTTAAAATGTCCATTCACAGAATTGTTTT
ACTTTCTAACAAAGTTAAACATAAGAGAAAAGTTTTCACcgagaaaaaga
aatcattcaccgtccattttatttttaaaatgccGTATTATGTTAATTTT
GAGAAACTCGCCGTATACGTTTGGTATCCCTAACTGAATAAACTAGGCCA
ATTTGATGGTAAAATCCAGGCGTAATCTACCGAACAAAATCAAATTCTAT
TTTTAATCGAATTTATCTTATCGAAACTAATCGAAATTAATACTTCGATT
AGGCTTCGATTAATCGAAACTATCGAGCtgtaatcgaattaatcgaattt
tCCAAGGTTTTTCTCAATTAGTTTGATTACCTTTGATTAATTCGATAATG
TTCGATAACTTGGATAAATGTTTGATAAGTTTCGATTTAGATTCGATAAG
CTTTGATAAGTCTTCAATACCTTCGATTAATGACAAGAATAATTCTATTG
CATATTCCAGAAAATAGATTTTGAAAACCAAGAAAGaattacaattttga
aaattttctaagaaTTACAATATTGAAAAAGAGATAGATTTTGAGTGAGA
TTTTTTCGTTCAATTGACATAGTCTGGCCATAAGTCCAAAGGACAAGAGT
GCAAATTACAGTTTTATGACATAGTAATTATCTTTATATACTATGAATAG
ATAATTgctttgtcataaaaatctactcTCCTACAACAAAGTTTGCACCC
CTCTTGTCTTAGAATTTGGAATTGAAGATGACTCTAATTATAGCCGCTAA
TTACTGAAGACCCTTGACTGTAAAATAATCTTTGTAGATTGCGCAATGCG
TTAATAAATTTTGCATTCTGATATGAAATTTGGCCTGGAGAGTTAGTTCA
ctaaaaattcaatgtttaataATTTGTAATTCTTTTCTGCTTTTAGAACC
GCCCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATC
AGAATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGT
GAACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGG
TGAAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGA
AAGAATTGGGCATTGAGTAAGTTGTAATATTTTCTCGTTTGATTTTTGAA
GCAACTTCAGCCTTGTATGGTCTACGCTCGTTAATTGGATGCcccgtttt
caaaaaaattcgaatgcCCCGTAAGATTTGTGGTCCCTTGAGGAGAAATA
AGCTCCTTGACCCAAACCCTGAAGGGTTTAGAGAGTGTTACGGTACAATG
TACTCAAAAACTTTACGAACAATTTGATACTGGCTACTTGGTTCGTATGA
ATCGCTCTTTTCTTGTCAATGAAAGTTTATGAGcagaagaagtaaaaaaa
aatactgaaaTCAAATGAGATTTTGCAGCTATGGTTATCACAATCACAAT
CACTTCTTCTTATCACCAGCATGTTCTAATATTTCTTGTGTCAAAGTTTG
AGACATTCgcagaatatttttgtttacctTTACAACCAtttttttGTTCT
TAGTAAATTTGGACCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCA
AAGAGCGAAAGGCTGCTCATGACCCTAATGTAAGTCTATATGCATAATTC
agtttacaaattttgtttttaccaaaatgcTGTGCTACATAAAATTTAAT
AAccaaatcttcattttctgtGAACATAAGACTTATCTTAACCCTTTGAA
CACGCTTGAAAATGGTGaaagattttcatgattttttttttgaaacataa
acataGATTCTACCCCCTATCCTTAGGGGGTCtgagactttcaaaaattt
ttgtaaggggggtcttttttctttcaatttcctaAGGGCGTTATGGGagt
ttttttaggaaatttgCGCCGTACCAGTAAATTCGTTGTAGTTTTCCCGG
GGGACAGGTCGTAACCAAATGGGTTGGCGGGAATTGACCTTCCTTAAGAC
TCATACATTGGGgaaattttttgcagaaagttGTGAGACAAGGCTTCTGA
AAAGGACATCCCCTTCTGGAGCTTTAGTCCGTACAGTCAAGCTACTGAAT
CACCACGgcaaattttattactttttgaagTACCACCGCAGTTATAATtt
taatattcctttctttttagaaaaattgcaaagcaTTGATGGAGACATCA
GAAGAGCTCCAGGAACACCTAATCGGCTGTCATGCGAAGCCAATTTTTGT
GTGTTCCTGGAGCGAGTGTAAAAGTACTTTCGAAACGAAAGCTAAGTTTC
TGGTGCACCTGAAACGCCACTCTGGTTAGTTGcagtttcaaaataaatct
ttttcctCCAATTTTGTATCAAGGGTATTTTGATATTTGCCCCTCTATTC
GACCTTTTCACAATGGGTTGTTCCAGGTTGTTCCTGGAAAATATTAGGAT
GCTGGTATCCTCTAAGAATCATGCTTCCTATACTTGAGCTTTCTTAGATG
AAAAATTTACGCCTGCGACGCTGAAAtcacaagaaaaattttatccttca
aaaaaggtcgaattttttccaatcttgcccccccccctaaacgAAAATTC
GTGACTACGCCTCTGGGTTTTATtgaggtctgcgaatcagactagtTTAA
ATTGTCCATATTCTTAAAAACGCTAATCTCAAAATTGAAAAGGAACTCCA
GGGGCTCAAACCGGGCAAGCAGGGTATATTGAAAATAGCCAAGTTGATGA
AGTTGAAGACGTTTATGTTTGAGATTACTATTTTTAAAAGTCCCCTTGTC
TTcaaagaaattatgaaattctTTTAAGATGAAGGAGATAAGAAATGATA
TTCGGGATAATTTTGGAGACTAATTTCGTGTTTTATAGATGAATTTACAG
ttacatttctttttcttttaggtgttgaaaaaggaaaatggaGATGCAAA
TTTGCTGGGTGCGGGAAAGAATATGCGAATTCAAGCAATCGGTCGAAACA
TCATCGAGTgcacaataaaagaaaatcatataAGTGCGATGTCTGTGATC
TATCGTACGATTACGCAAATTCGTTAAATAAACACAAGAAGCGCGCccat
taaatatttaaaaaaatcacaagaaaaatcagaaaaatcagaaaatttaa
ctattaaTTTaaatcaaaaaaaaattccccatTTATCGGGGAAagcttcg
tcggggaaaatatttgtcacttactaaaattttagtcatttttccccgac
gaaaattttctctggggtatttttcaaacaagaatttttttccatCTATA
TCGACATATTTAATGCCGTTTCTTGTGTCTGCATAATGAACTTGGCTTGG
TGTGTACGATTTATCAACATTAcacttatgat Coding sequence (CDS) from alignment at sc0000082_pilon:1006349..1010180+ >MSTRG.11402.2.p1 ID=MSTRG.11402.2.p1|Name=MSTRG.11402.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000082_pilon:1006349..1010180+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAGG
AGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATACAAATT
CGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCG
CCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCA
AATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTT
TGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAATTTGGA
CCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGC
TGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACATCAGAAG
AGCTCCAGGAACACCTAATCGGCTGTCATGCGAAGCCAATTTTTGTGTGT
TCCTGGAGCGAGTGTAAAAGTACTTTCGAAACGAAAGCTAAGTTTCTGGT
GCACCTGAAACGCCACTCTGGTTAGATGATGAATTCAATATCGCAAGAAC
TTTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCG
CCCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCA
GAATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTG
AACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGT
GAAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAA
AGAATTGGGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAA
TACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgc
aaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTG
TCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGTAAAAGTACTT
TCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCACTCTGGTTAG
ATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAGG
AGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATACAAATT
CGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCG
CCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCA
AATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTT
TGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAATTTGGA
CCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGC
TGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACATCAGAAG
AGCTCCAGGAACACCTAATCGGCTGTCATGCGAAGCCAATTTTTGTGTGT
TCCTGGAGCGAGTGTAAAAGTACTTTCGAAACGAAAGCTAAGTTTCTGGT
GCACCTGAAACGCCACTCTGGTTAGATGATGAATTCAATATCGCAAGAAC
TTTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCG
CCCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCA
GAATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTG
AACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGT
GAAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAA
AGAATTGGGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAA
TACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgc
aaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTG
TCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGTAAAAGTACTT
TCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCACTCTGGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:1006349..1010180 + |
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