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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1006326..1010800+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11402.1.p1 ID=MSTRG.11402.1.p1|Name=MSTRG.11402.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4475bp|location=Sequence derived from alignment at sc0000082_pilon:1006326..1010800+ (Clytia hemisphaerica_ch_hm2_pilon)
CGGCTTAACTCTCTGGTGTGAACCGCCATTATCAGTGCTACAAGCTCTAA
CCGCAAACACAAGCAAGCACAACAATGATGAATTCAATATCGCAAGAACT
TTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGGTAAGT
CTTGTGTTATTTTTACAAAGTCCACTGGTTACTGGATTGGAGAGATATGG
TTGGAGGTTTTTTGTCAGCTTGTCTTTTTTGCACGTGTGCACCACTGTAA
TTATAGACAGATTCTTGATGACatcatttgtttacattttgtttcaaatt
gCCTGCTCagattacacatttttttctttattagcagCTCTAATTTTGGC
TATTGTTTGCATTGGTTAGGCAGGCCCATATCAGcatattgattgttgtt
gttTGGTTCGTGTCAAATCCCAATGTTAAGGGCCCATTCACAACTTTAAA
ATGTCCATTCACAGAATTGTTTTACTTTCTAACAAAGTTAAACATAAGAG
AAAAGTTTTCACcgagaaaaagaaatcattcaccgtccattttattttta
aaatgccGTATTATGTTAATTTTGAGAAACTCGCCGTATACGTTTGGTAT
CCCTAACTGAATAAACTAGGCCAATTTGATGGTAAAATCCAGGCGTAATC
TACCGAACAAAATCAAATTCTATTTTTAATCGAATTTATCTTATCGAAAC
TAATCGAAATTAATACTTCGATTAGGCTTCGATTAATCGAAACTATCGAG
CtgtaatcgaattaatcgaattttCCAAGGTTTTTCTCAATTAGTTTGAT
TACCTTTGATTAATTCGATAATGTTCGATAACTTGGATAAATGTTTGATA
AGTTTCGATTTAGATTCGATAAGCTTTGATAAGTCTTCAATACCTTCGAT
TAATGACAAGAATAATTCTATTGCATATTCCAGAAAATAGATTTTGAAAA
CCAAGAAAGaattacaattttgaaaattttctaagaaTTACAATATTGAA
AAAGAGATAGATTTTGAGTGAGATTTTTTCGTTCAATTGACATAGTCTGG
CCATAAGTCCAAAGGACAAGAGTGCAAATTACAGTTTTATGACATAGTAA
TTATCTTTATATACTATGAATAGATAATTgctttgtcataaaaatctact
cTCCTACAACAAAGTTTGCACCCCTCTTGTCTTAGAATTTGGAATTGAAG
ATGACTCTAATTATAGCCGCTAATTACTGAAGACCCTTGACTGTAAAATA
ATCTTTGTAGATTGCGCAATGCGTTAATAAATTTTGCATTCTGATATGAA
ATTTGGCCTGGAGAGTTAGTTCActaaaaattcaatgtttaataATTTGT
AATTCTTTTCTGCTTTTAGAACCGCCCAATCAAAAAAGGTATACAAATTC
GTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCGC
CCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCAA
ATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTTT
GGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGAGTAAGTTGTAA
TATTTTCTCGTTTGATTTTTGAAGCAACTTCAGCCTTGTATGGTCTACGC
TCGTTAATTGGATGCcccgttttcaaaaaaattcgaatgcCCCGTAAGAT
TTGTGGTCCCTTGAGGAGAAATAAGCTCCTTGACCCAAACCCTGAAGGGT
TTAGAGAGTGTTACGGTACAATGTACTCAAAAACTTTACGAACAATTTGA
TACTGGCTACTTGGTTCGTATGAATCGCTCTTTTCTTGTCAATGAAAGTT
TATGAGcagaagaagtaaaaaaaaatactgaaaTCAAATGAGATTTTGCA
GCTATGGTTATCACAATCACAATCACTTCTTCTTATCACCAGCATGTTCT
AATATTTCTTGTGTCAAAGTTTGAGACATTCgcagaatatttttgtttac
ctTTACAACCAtttttttGTTCTTAGTAAATTTGGACCACGTAAAAAGAT
GTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTA
ATGTAAGTCTATATGCATAATTCagtttacaaattttgtttttaccaaaa
tgcTGTGCTACATAAAATTTAATAAccaaatcttcattttctgtGAACAT
AAGACTTATCTTAACCCTTTGAACACGCTTGAAAATGGTGaaagattttc
atgattttttttttgaaacataaacataGATTCTACCCCCTATCCTTAGG
GGGTCtgagactttcaaaaatttttgtaaggggggtcttttttctttcaa
tttcctaAGGGCGTTATGGGagtttttttaggaaatttgCGCCGTACCAG
TAAATTCGTTGTAGTTTTCCCGGGGGACAGGTCGTAACCAAATGGGTTGG
CGGGAATTGACCTTCCTTAAGACTCATACATTGGGgaaattttttgcaga
aagttGTGAGACAAGGCTTCTGAAAAGGACATCCCCTTCTGGAGCTTTAG
TCCGTACAGTCAAGCTACTGAATCACCACGgcaaattttattactttttg
aagTACCACCGCAGTTATAATtttaatattcctttctttttagaaaaatt
gcaaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGC
TGTCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGTAAAAGTAC
TTTCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCACTCTGGTT
AGTTGcagtttcaaaataaatctttttcctCCAATTTTGTATCAAGGGTA
TTTTGATATTTGCCCCTCTATTCGACCTTTTCACAATGGGTTGTTCCAGG
TTGTTCCTGGAAAATATTAGGATGCTGGTATCCTCTAAGAATCATGCTTC
CTATACTTGAGCTTTCTTAGATGAAAAATTTACGCCTGCGACGCTGAAAt
cacaagaaaaattttatccttcaaaaaaggtcgaattttttccaatcttg
cccccccccctaaacgAAAATTCGTGACTACGCCTCTGGGTTTTATtgag
gtctgcgaatcagactagtTTAAATTGTCCATATTCTTAAAAACGCTAAT
CTCAAAATTGAAAAGGAACTCCAGGGGCTCAAACCGGGCAAGCAGGGTAT
ATTGAAAATAGCCAAGTTGATGAAGTTGAAGACGTTTATGTTTGAGATTA
CTATTTTTAAAAGTCCCCTTGTCTTcaaagaaattatgaaattctTTTAA
GATGAAGGAGATAAGAAATGATATTCGGGATAATTTTGGAGACTAATTTC
GTGTTTTATAGATGAATTTACAGttacatttctttttcttttaggtgttg
aaaaaggaaaatggaGATGCAAATTTGCTGGGTGCGGGAAAGAATATGCG
AATTCAAGCAATCGGTCGAAACATCATCGAGTgcacaataaaagaaaatc
atataAGTGCGATGTCTGTGATCTATCGTACGATTACGCAAATTCGTTAA
ATAAACACAAGAAGCGCGCccattaaatatttaaaaaaatcacaagaaaa
atcagaaaaatcagaaaatttaactattaaTTTaaatcaaaaaaaaattc
cccatTTATCGGGGAAagcttcgtcggggaaaatatttgtcacttactaa
aattttagtcatttttccccgacgaaaattttctctggggtatttttcaa
acaagaatttttttccatCTATATCGACATATTTAATGCCGTTTCTTGTG
TCTGCATAATGAACTTGGCTTGGTGTGTACGATTTATCAACATTAcactt
atgatttttttttcttattttgaaagcAATAAGCtaagattgaaagaaaa
agacataTTAAAGGATCAAATTCAAAAGGATCAAACAAATATTTGGACCA
ATAATGACCGTGTGTCCGTGTGTCCGTATATGTTTCAGCCGATTGCTTGA
ATCGGCAAATTCTTTGCCGTACCGTATCAGCAACATTACACCATACATAT
TATCTATTATCATTTTCGGGAGAACGCCCTTTTTGGACTGCTTGGTATGA
TCTATACGGGCATGCCTACGGCACAGTTATGTTATCTACTACTTCCATCA
GTCATCTCTTTCTTCTGTTTGATAAttattctttttgattttcgcTGCTT
TTTGTCCTGAATTAACAAGAAGGGTTATATAAGCGTTTTTATTCAACCAC
TCCTTTTATTCCTTTGTAAGTATTCCCATTTGTACATATTGTTTATAACT
ACGCACCACTttttattaaatctttttaacGAAATATCGTAGCCAGAGTG
TCAGGCGTGATGTATAACCTCCGTTCACTAAAGTTTtcactacagtatat
ggcccccaataTGTAGGTTGAATTTGAAAGCTCTCTCAAATCCGCaggaa
aagatattttacaaaaattttttct Coding sequence (CDS) from alignment at sc0000082_pilon:1006326..1010800+ >MSTRG.11402.1.p1 ID=MSTRG.11402.1.p1|Name=MSTRG.11402.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000082_pilon:1006326..1010800+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAGG
AGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATACAAATT
CGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCG
CCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCA
AATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTT
TGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAATTTGGA
CCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGC
TGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACATCAGAAG
AGCTCCAGGAACACCTAATCGGCTGTCATGCGAAGCCAATTTTTGTGTGT
TCCTGGAGCGAGTGTAAAAGTACTTTCGAAACGAAAGCTAAGTTTCTGGT
GCACCTGAAACGCCACTCTGGTTAGATGATGAATTCAATATCGCAAGAAC
TTTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCG
CCCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCA
GAATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTG
AACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGT
GAAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAA
AGAATTGGGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAA
TACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgc
aaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTG
TCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGTAAAAGTACTT
TCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCACTCTGGTTAG
ATGATGAATTCAATATCGCAAGAACTTTCTCAGAAGAAACGTGGAGTAGG
AGCCATAAACCGACTAAATGAACCGCCCAATCAAAAAAGGTATACAAATT
CGTATACTATCGACGCTTTTAATCAGAATCCACCCATCAGCCCCCTTCCG
CCCAAACTACCAGACACGTTGGGTGAACTGCTAGCAGAATACAATCTTCA
AATGTATTTACCGAAGCTGGAAGGTGAAGCGTTGGATGTAGCAACGTTTT
TGGAGTTGTGCGATAACGATTTGAAAGAATTGGGCATTGATAAATTTGGA
CCACGTAAAAAGATGTTGTTAGCAATACGAGAATGCAAAGAGCGAAAGGC
TGCTCATGACCCTAATaaaaattgcaaagcaTTGATGGAGACATCAGAAG
AGCTCCAGGAACACCTAATCGGCTGTCATGCGAAGCCAATTTTTGTGTGT
TCCTGGAGCGAGTGTAAAAGTACTTTCGAAACGAAAGCTAAGTTTCTGGT
GCACCTGAAACGCCACTCTGGTTAGATGATGAATTCAATATCGCAAGAAC
TTTCTCAGAAGAAACGTGGAGTAGGAGCCATAAACCGACTAAATGAACCG
CCCAATCAAAAAAGGTATACAAATTCGTATACTATCGACGCTTTTAATCA
GAATCCACCCATCAGCCCCCTTCCGCCCAAACTACCAGACACGTTGGGTG
AACTGCTAGCAGAATACAATCTTCAAATGTATTTACCGAAGCTGGAAGGT
GAAGCGTTGGATGTAGCAACGTTTTTGGAGTTGTGCGATAACGATTTGAA
AGAATTGGGCATTGATAAATTTGGACCACGTAAAAAGATGTTGTTAGCAA
TACGAGAATGCAAAGAGCGAAAGGCTGCTCATGACCCTAATaaaaattgc
aaagcaTTGATGGAGACATCAGAAGAGCTCCAGGAACACCTAATCGGCTG
TCATGCGAAGCCAATTTTTGTGTGTTCCTGGAGCGAGTGTAAAAGTACTT
TCGAAACGAAAGCTAAGTTTCTGGTGCACCTGAAACGCCACTCTGGTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:1006326..1010800 + |
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