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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:1003551..1005608- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11401.1.p1 ID=MSTRG.11401.1.p1|Name=MSTRG.11401.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2058bp|location=Sequence derived from alignment at sc0000082_pilon:1003551..1005608- (Clytia hemisphaerica_ch_hm2_pilon)
GTACAAGTGCTTTAGCGATCATTGTAAAAAACTCGAAATGCAAAATGACA
AAATGGTAGTCAGCAGTCAGTATAGTTGATTCACTTTTCGCTTGAACGAA
CTGCTGAGTTGCAAAATTTTGCAAAAGTTTCTCCCAAAATATGTGATGGA
AGGATTTGCTTGCGACAACTGCAATTTTGAATCACAAACATTGAAACTTT
TGTTGCGTCATATTTACTGTTCACACAGCCAAAGTTTGAATTTCAGAACT
AAGTGTACTCTCTGTGAGCTTTACTTTACGAAACATAACTCACTATATAA
GCATACATTGAGACATCACAGAGAACTGTTTAATGCTGGGATTTGTGCAG
ATGCAGATCAAAATTTACAGGAAAATGAACGTTATGTTGAGCAGGAAAAT
CATGAAGATGATTTTATTAATCAAGACTACCATGATGATCATAATGATGA
CAGTGAAAAAGATGATGACAGTAGCTTAAACGAGACACTCTCCTCAACAG
AACTTTCAGATCATGAAGATACAGAAAATTCAGGATTTTCTGATGACAGT
AGTGATGAAGCAAGTGATTTTGATGAGGATGATATGGATATACCTCCTGA
AAACATACACGAAGAGGAAGATCAGGTAGCTTTAGGGTGGGCTCAATATC
AAAATATAATCTAGCTGTATTAATTATCCATACTGTAGTCCTTTTGAATA
GTTTTGCTTAATACTTGAGTCCAACTGCTGTAATGAGTCCCGGACAAGGA
ATAATTATTGAAATTATAACACTCACTTATTGCTGACATAAGCATGGGTG
CGCATCAAGAGGAAAAAACTTTTTATTACCGAATAATACCTTTAGGGTAG
AATTTTCAGATTTTCATCTCCGTTCAATGTATTTCTTAGACAAAATCTTG
TCACTCAGGAATTATTCAGCTTAACGACAGATGTATTTCCAAATGTAAGC
CACAAAATGCTCTCACTCTATGAGCAAATTTGTGGCTGACTGTAAAAATG
TCACAAAACAGGGGTTAATTTTTGATTAGCATCCATTGTGTTTTCTATTT
TCAAGGACGACCCAGATTTGAAAGAAGCCTGTTGTTCCTTTATATTAAAA
GTCAAAGATAAGCACAATCTTTCGCAGGTAAGACTGTATGTTTTATGGTA
ACTTAGAGAGGTTCCACTAATTTCATGTTATAAACCATTCATAATAACAC
AATAAATTTTCGCAATTTTCGTGTATTTTGGCCATTTTCGCGAAATTTTG
TTCACGCAAAATTTTTAACATTGCAATTTTTGCCAAAACCCCTCCGGAAA
ATGAAACAAGTACATACGGTGAAAAACAGGCTGATTCGCAAAATTTTGTC
CACTTGAAAATTTAATCCACTTAAGGTCAAAGGTGTTTTTAATATTTTAG
GTGTCATTGGAGTCGATCATGGAGAGTACAAAATATCTATCAACCATTTC
AAACCATTTATTGAAGGAGAAAATCAAAGGCGTACTTGAGAGGCACAATT
TTCCACACATACAAGAGACTGAAAATGTATTCGATGAAAACCCTGGGCTT
TTTGAGGGCCTTGAGACATTACCGTTACAAAATCGCTACATCGCCGAACA
TTACGATTTGTTATCTTTCAAAGAAATCTTTCTGGGAAACAAGATGAAGT
ATAAAAAGAAAGGTTCTAAACAGGTGATTGCCGAAGATCAAGATACGTTC
ATTTACATTCCAATCATTGAAAGTCTACATCAGTTATTAAAGGATTCAAT
GATGAGAAAAGAACTGTTGCGGGAACCGCAAGCTAGTGCAAAAGATGTTT
TATTTGATTTTCAAGATGGTGAACTGTTCCAAAATGACAAATACTTCCAA
GATCACAAAGATGCTATCGCTTTGATTATTTTTCATGACGAAATTGAAGT
GTGCAATCCATTAGGAAGCAAAGCCGGAAAGCATAAATTAGATCTATACT
ACTATAGGGGGGGGGGGGCGTACGAGGTTTTGAATTACCGTCATCCCGGC
CATTTTTTTGAAAATCACCGTTATCCCGTCCAAATATTTCGAAAATACCG
GTCCCGCT Coding sequence (CDS) from alignment at sc0000082_pilon:1003551..1005608- >MSTRG.11401.1.p1 ID=MSTRG.11401.1.p1|Name=MSTRG.11401.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3627bp|location=Sequence derived from alignment at sc0000082_pilon:1003551..1005608- (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCATTGGAGTCGATCATGGAGAGTACAAAATATCTATCAACCATTTC
AAACCATTTATTGAAGGAGAAAATCAAAGGCGTACTTGAGAGGCACAATT
TTCCACACATACAAGAGACTGAAAATGTATTCGATGAAAACCCTGGGCTT
TTTGAGGGCCTTGAGACATTACCGTTACAAAATCGCTACATCGCCGAACA
TTACGATTTGTTATCTTTCAAAGAAATCTTTCTGGGAAACAAGATGAAGT
ATAAAAAGAAAGGTTCTAAACAGGTGATTGCCGAAGATCAAGATACGTTC
ATTTACATTCCAATCATTGAAAGTCTACATCAGTTATTAAAGGATTCAAT
GATGAGAAAAGAACTGTTGCGGGAACCGCAAGCTAGTGCAAAAGATGTTT
TATTTGATTTTCAAGATGGTGAACTGTTCCAAAATGACAAATACTTCCAA
GATCACAAAGATGCTATCGCTTTGATTATTTTTCATGACGAAATTGAAGT
GTGCAATCCATTAGGAAGCAAAGCCGGAAAGCATAAATTAGATCTATACT
ACTATAGGGGGGGGGGGGCGTACGAGGTTTTGAATTACCGTCATCCCGGC
CATTTTTTTGAAAATCACCGTTATCCCGTCCAAATATTTCGAAAATACCG
GTCCCGCGACGACCCAGATTTGAAAGAAGCCTGTTGTTCCTTTATATTAA
AAGTCAAAGATAAGCACAATCTTTCGCAGATGGAAGGATTTGCTTGCGAC
AACTGCAATTTTGAATCACAAACATTGAAACTTTTGTTGCGTCATATTTA
CTGTTCACACAGCCAAAGTTTGAATTTCAGAACTAAGTGTACTCTCTGTG
AGCTTTACTTTACGAAACATAACTCACTATATAAGCATACATTGAGACAT
CACAGAGAACTGTTTAATGCTGGGATTTGTGCAGATGCAGATCAAAATTT
ACAGGAAAATGAACGTTATGTTGAGCAGGAAAATCATGAAGATGATTTTA
TTAATCAAGACTACCATGATGATCATAATGATGACAGTGAAAAAGATGAT
GACAGTAGCTTAAACGAGACACTCTCCTCAACAGAACTTTCAGATCATGA
AGATACAGAAAATTCAGGATTTTCTGATGACAGTAGTGATGAAGCAAGTG
ATTTTGATGAGGATGATATGGATATACCTCCTGAAAACATACACGAAGAG
GAAGATCAGGTGTCATTGGAGTCGATCATGGAGAGTACAAAATATCTATC
AACCATTTCAAACCATTTATTGAAGGAGAAAATCAAAGGCGTACTTGAGA
GGCACAATTTTCCACACATACAAGAGACTGAAAATGTATTCGATGAAAAC
CCTGGGCTTTTTGAGGGCCTTGAGACATTACCGTTACAAAATCGCTACAT
CGCCGAACATTACGATTTGTTATCTTTCAAAGAAATCTTTCTGGGAAACA
AGATGAAGTATAAAAAGAAAGGTTCTAAACAGGTGATTGCCGAAGATCAA
GATACGTTCATTTACATTCCAATCATTGAAAGTCTACATCAGTTATTAAA
GGATTCAATGATGAGAAAAGAACTGTTGCGGGAACCGCAAGCTAGTGCAA
AAGATGTTTTATTTGATTTTCAAGATGGTGAACTGTTCCAAAATGACAAA
TACTTCCAAGATCACAAAGATGCTATCGCTTTGATTATTTTTCATGACGA
AATTGAAGTGTGCAATCCATTAGGAAGCAAAGCCGGAAAGCATAAATTAG
ATCTATACTACTATAGGGGGGGGGGGGCGTACGAGGTTTTGAATTACCGT
CATCCCGGCCATTTTTTTGAAAATCACCGTTATCCCGTCCAAATATTTCG
AAAATACCGGTCCCGCGACGACCCAGATTTGAAAGAAGCCTGTTGTTCCT
TTATATTAAAAGTCAAAGATAAGCACAATCTTTCGCAGATGGAAGGATTT
GCTTGCGACAACTGCAATTTTGAATCACAAACATTGAAACTTTTGTTGCG
TCATATTTACTGTTCACACAGCCAAAGTTTGAATTTCAGAACTAAGTGTA
CTCTCTGTGAGCTTTACTTTACGAAACATAACTCACTATATAAGCATACA
TTGAGACATCACAGAGAACTGTTTAATGCTGGGATTTGTGCAGATGCAGA
TCAAAATTTACAGGAAAATGAACGTTATGTTGAGCAGGAAAATCATGAAG
ATGATTTTATTAATCAAGACTACCATGATGATCATAATGATGACAGTGAA
AAAGATGATGACAGTAGCTTAAACGAGACACTCTCCTCAACAGAACTTTC
AGATCATGAAGATACAGAAAATTCAGGATTTTCTGATGACAGTAGTGATG
AAGCAAGTGATTTTGATGAGGATGATATGGATATACCTCCTGAAAACATA
CACGAAGAGGAAGATCAGGTGTCATTGGAGTCGATCATGGAGAGTACAAA
ATATCTATCAACCATTTCAAACCATTTATTGAAGGAGAAAATCAAAGGCG
TACTTGAGAGGCACAATTTTCCACACATACAAGAGACTGAAAATGTATTC
GATGAAAACCCTGGGCTTTTTGAGGGCCTTGAGACATTACCGTTACAAAA
TCGCTACATCGCCGAACATTACGATTTGTTATCTTTCAAAGAAATCTTTC
TGGGAAACAAGATGAAGTATAAAAAGAAAGGTTCTAAACAGGTGATTGCC
GAAGATCAAGATACGTTCATTTACATTCCAATCATTGAAAGTCTACATCA
GTTATTAAAGGATTCAATGATGAGAAAAGAACTGTTGCGGGAACCGCAAG
CTAGTGCAAAAGATGTTTTATTTGATTTTCAAGATGGTGAACTGTTCCAA
AATGACAAATACTTCCAAGATCACAAAGATGCTATCGCTTTGATTATTTT
TCATGACGAAATTGAAGTGTGCAATCCATTAGGAAGCAAAGCCGGAAAGC
ATAAATTAGATCTATACTACTATAGGGGGGGGGGGGCGTACGAGGTTTTG
AATTACCGTCATCCCGGCCATTTTTTTGAAAATCACCGTTATCCCGTCCA
AATATTTCGAAAATACCGGTCCCGCGACGACCCAGATTTGAAAGAAGCCT
GTTGTTCCTTTATATTAAAAGTCAAAGATAAGCACAATCTTTCGCAGATG
GAAGGATTTGCTTGCGACAACTGCAATTTTGAATCACAAACATTGAAACT
TTTGTTGCGTCATATTTACTGTTCACACAGCCAAAGTTTGAATTTCAGAA
CTAAGTGTACTCTCTGTGAGCTTTACTTTACGAAACATAACTCACTATAT
AAGCATACATTGAGACATCACAGAGAACTGTTTAATGCTGGGATTTGTGC
AGATGCAGATCAAAATTTACAGGAAAATGAACGTTATGTTGAGCAGGAAA
ATCATGAAGATGATTTTATTAATCAAGACTACCATGATGATCATAATGAT
GACAGTGAAAAAGATGATGACAGTAGCTTAAACGAGACACTCTCCTCAAC
AGAACTTTCAGATCATGAAGATACAGAAAATTCAGGATTTTCTGATGACA
GTAGTGATGAAGCAAGTGATTTTGATGAGGATGATATGGATATACCTCCT
GAAAACATACACGAAGAGGAAGATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:1003551..1005608 - |
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