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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:985294..989698+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11398.4.p1 ID=MSTRG.11398.4.p1|Name=MSTRG.11398.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4405bp|location=Sequence derived from alignment at sc0000082_pilon:985294..989698+ (Clytia hemisphaerica_ch_hm2_pilon)
GGATTTCTGTAGTTTCCAAACAAAAGCAGGGTTGGTTGGCTTGTATCCTT
CTGGTGCGTTAACATAAATCTCCTCCTCAATAGGTGCATGAAGAAAAGCG
GTTTTGACGTCCATCTGCTGGAGATCAAGATCACGATGGGCAGCAACTTG
GATAAGGGTACGAACGGTTTCCATTCTGGCTGTAGGTGAAAAAGTCTCAT
GGTAATCGATACCTTCAACTTGAGAGTATCCTTTTGCAACAAAACGAGCT
TTGAAAGTCGGGTTTTCAGGGTCACCTTTCAAATTAAAAACCCATTTTCC
CCCAACTAACGATTTATTGGAAGGAAGCTCTTTTTCGATAAATGTGTGAT
TCGATTTCAAGCTCTCAAATTCATTGTCCATAGCTTGTTTCCATTGCTTG
GCTTCTGGACAGGACAGGGCTTCTTTGAAGGATGCAGGTGTGTTAACGTG
GTAACAATAATGCACGAATTTGGCAGCGTCAATTTCATCAGGTTCATTCT
TTGGTTCATCTGGGATTGACGGTTGTTGACGTGATCTGAGAGGATACGAT
TTCCATGGTTCAGATTTAGCGGTTACGGTCATAGGCTTATCGTCAGATGG
ATCTGGTTTGACGGTCGGTTCATCAGCAACTGGTAAGGTATCGTCAGCAA
CTGGTATTTGGTTGACTGTGGGTAGAAATTTTACGAGACGATGTTTTGAG
ACTGCTTTGGTTTCAAGGTCATAGACTAGGTAGCTGGGACTATCTCGATC
GTATCCGACAAAGACTCCTTTAGATGTCCTGGGATctagtttctttggtt
tgatgGTGATAGGATAACAAATCGATCCGAAAACTTGAAGTCGAGCAACG
TCTGGTTTGGAACCGGTAATAAGTCCATACGGAGTGTTCTTAGTCCGCTG
ACTGTAGCATCGGTTACGGATGTGAGTTGCAGTCATGACGGCATACGTCC
ACAGATTCTTGGGTAAACCTGCCTCTAACAATAATGATCTAGCCATTTCA
AACAACGTGCGCCAACTTCTTTCAGCGGTACCATTTTGATGAGGTGAATA
TGGGGCACTCTTCTCATGTTTGATTTTATGCTTAATCAAAAGATCACTGA
ACTCATGAGAAATGAACTCCCCACCATTATCTGATCGAACACGTTTTGGC
TCTCCTGATGGAAAAATGTCCTCATGAAAACTTTAACCTTTCCCATACGG
GGCAACATCAGCTAAGAATTTTTCTGTGGCACGAGTGGTGTCTGATTTCT
CCTTGAGAAAATAGGTAAACATATTTCCTGAATAATCGTCAGTAAACACA
ATGGCATATTTGAAGCCATCCTTAGCAATTGGATCTATAGGTCCAGAGAG
GTCGGTGTGAATCAGTTCAAATGGCTCAGTTGCTCTTACGTCTGGGTTAC
GGTTGCGAGTATTCGGTTGTTTGGCCATGATGCAGGTTTCACAGTCAAAT
TTGGTTTGGCTGTCACTGATTTTCATTCCCTGGACTACGCTCTCCATCTT
CAGGATGTCAGCCGTGTTGCAGTGACCAAGAATACGATGCCACGTTTGAA
GGCTCTCTGAACGATTAGAGTTGACGACTGACTTGCAAAGGTAATACAAA
cgtttttcttggaaaattggaaaaatagttCCATTTGGTGCGATAAGTTC
ATTCCTATCCTCCGAAAATATTACTCTACAACCGTGACTTGTGGCTGATT
TAACAGAAAAAATGCATTGTGGAAAGTCTGGAATAAGCAAAACATCTCTC
AACTTTACTTCAACAAATTCATTTTCGTTGGTTCGAAATTTGGTAATAAC
AGTTCCCTTCTGTTTAGCCACACCATTCACTGTTGTACCATCAGCTAATT
CGATATAGTGGTCACTTGATTTGAATGTCGAATCAACGTCTAGGAAACAC
GACTTGTCATTCACTATGTGAGTAGTAGCACCACAATCAACGAGAAACGT
ATTCGAGCTAGCTTCAATGTTTGACTTTGTATCACTAGCTTTGAAAGCAA
AAGAGTGATCTTCTCCTTTGGTGGACGTTTTGTTTGCACTGTCCTTTTTC
TTCCTACACTTGTTAGTGTTGTGACTTTTGTTTTTACAGATACTACACCA
CCGACCTTTACTCTTTTTGTCACAGCTGGTTGATTTGTGTCCTGGAGTTC
CACAGGAGTAACATACGATTGGTTTCCTTCCTTCCTGGGCATAGAGTTTC
ATTATGGCGGAGGATTGATCAGTAGGGTTAGATTGGGTTCTCAAATTTTC
GGTTTCTTCAAAATGTCTAAGAgaagttttaaattttgcaaaGTCAGTAA
CATTTTCTGCTTGAGTTGTAACTGCCACAAAAGCCTTGTACTCGTCTGGT
AAGCCTTTTAAAACCATTGCAATCAATAACGAGTCACTCCCATTCATCAA
TCAACCTACAGGCCCATTATAAATTACCTTTCTGGACATTTTGCTTAGCT
TAAaaggaaaagtttttcttttgtattttctaagTATCTTTATCTTTTAA
ACAGGGACAAATGGACCTGGATGTATGGAACGAGCCATTATCACCACTCC
AGGTATGTGATTTTGCAGCATAGACAATAGATAACCTGAATTATTCCAAT
TATGTCTTCCAAATTGATGTCTGCGGTTACTGTTTTGTTGCTTTTCTTGA
CCCATGTCAATAGGGAAAAGGATAATAACCAAAATGTCTTTCATTCTTAG
CCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCGAAGAAG
AAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGACTACAAATT
TAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACCATGTGG
AGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGaatggtaattttt
ttcttcttctttgaatGGGTTAGATGCTTTCAAAGCTATCATTATCAAAG
ATGTCTTTGTGCCTTGGATCTTTTCTTACTAAATTCCCCTTATAAGCATA
AGCAGATTTGCTGATTACTTAGGCATAGCAAGCATACAGgcctgaaaata
attttgtaaaGTTTACAAAGTTTGCTCGAATATATTCCCCTTAAACAGGA
GACATAGCCTTTACTTTGCACTTATTTTCCATGTATTAAACCGATAAGCA
TACTACACGCATGATATTCAGCCTGGATTCGAGCCTGACCTAGCCTGACC
AAAGGGCATACACTATAAATACGTATATGTTTGGAACTCTTTCTCCCCTG
GACGTTTATTTTAGCCCAGCTTTTCCTATATACGTTTATTCAAGTTCCAT
GTACGTCTATTTATTCAAGTTCTGATTTCACGTCTGTACGTTGTTTATTA
AGTCCAGTTTGATATTATCTTTTGTATGTTTACTAGAGACTCGAGAAGTT
TTACCATTCATACAGGATTTAGTATAAAAGTTTGAGATTTCCATTCAAGA
ACTcccaaatttcaaattcaggtAATCCACGAAGCATTTCAAGTAATCGA
ACACgaacgaaaaatcaaaaagctaACGAATTGCAACACCGACCGACTAG
AGGTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTTCAGATG
ATGCCTAAAGACAATAAGCCAGGTAATTAAAAACTCTTGTCACCTTTAAG
GTAGAAATTTTGGCGCTCAGAGATAAAAAATTCCTTAAACCTCAAAACCT
GGCAAAActtctaccttaagggaactaatttttgcggattTGGGCccaaa
ccgcaaaatttagttcctGAAAATTTATCACATGCGAAAAACTGGTCAAA
TAAATCACAAAATAGCTCTAATTTTCTTCCAAGTGAGAATCCCGCTAAGT
taatttcccgcaaaaaatctcaaaattgcgaaccgctaaaattagttccc
tcaaAAAAGGTAATTTCAAGATTGTTTGATTcatcttttataaaataaca
tTTCCTTTCcacaatccttcaagaaatatttgaaacaaagGGGaattccc
ggtgtaattttgaacaccacaattgatttttaagcgccttaaactacagt
tggaaagtagagttttaactctgagttttaacatgagacttaagacttag
gagcttaggatctcaggatttaaaagctcaaatttgctcgaatgaggctt
ggaatatagcctagaagccaccaaacccttctaaaatcgaaatattcaat
ggaagaaagtggaagtgctaaaatagcaattctcgcccgaactttaaatt
ctgaaaaacgttaaaatacactaaaatctcaatatatttcaagggAGATT
GCAGCCACAAGACTAACGTTTTTACTCAACAACCTACCATGCATCATTGG
GAATAAgcaaaaactttcgaaaaaactTGTACACGATGTTGCTTATTCTG
ACAAA Coding sequence (CDS) from alignment at sc0000082_pilon:985294..989698+ >MSTRG.11398.4.p1 ID=MSTRG.11398.4.p1|Name=MSTRG.11398.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2415bp|location=Sequence derived from alignment at sc0000082_pilon:985294..989698+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAAAGCGGTTTTGACGTCCATCTGCTGGAGATCAAGATCACGAT
GGGCAGCAACTTGGATAAGGGGACAAATGGACCTGGATGTATGGAACGAG
CCATTATCACCACTCCAGCCATGCATGAAAAGATTGTGCAAAAGATTGGA
GCTGAATATGCGAAGAAGAAATTCGACCTACAAACTTTGATATCGTACAT
AGACCAAGACTACAAATTTAGACGCTCGTTTATTGCCGGACTTGCCAAGA
ATAAAGATCACCATGTGGAGGTGCTAAAGAAATATCCATGCTTTCAAGAT
CACAGaatggtAATCCACGAAGCATTTCAAGTAATCGAACACgaacgaaa
aatcaaaaagctaACGAATTGCAACACCGACCGACTAGAGGTTGAAATCG
ACCATTTAATAACATGGGCAACTCTAAAACTTCAGATGATGCCTAAAGAC
AATAAGCCAGggAGATTGCAGCCACAAGACTAAATGAAGAAAAGCGGTTT
TGACGTCCATCTGCTGGAGATCAAGATCACGATGGGCAGCAACTTGGATA
AGGGGACAAATGGACCTGGATGTATGGAACGAGCCATTATCACCACTCCA
GCCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCGAAGAA
GAAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGACTACAAAT
TTAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACCATGTG
GAGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGaatggtAATCCA
CGAAGCATTTCAAGTAATCGAACACgaacgaaaaatcaaaaagctaACGA
ATTGCAACACCGACCGACTAGAGGTTGAAATCGACCATTTAATAACATGG
GCAACTCTAAAACTTCAGATGATGCCTAAAGACAATAAGCCAGggAGATT
GCAGCCACAAGACTAAATGAAGAAAAGCGGTTTTGACGTCCATCTGCTGG
AGATCAAGATCACGATGGGCAGCAACTTGGATAAGGGGACAAATGGACCT
GGATGTATGGAACGAGCCATTATCACCACTCCAGCCATGCATGAAAAGAT
TGTGCAAAAGATTGGAGCTGAATATGCGAAGAAGAAATTCGACCTACAAA
CTTTGATATCGTACATAGACCAAGACTACAAATTTAGACGCTCGTTTATT
GCCGGACTTGCCAAGAATAAAGATCACCATGTGGAGGTGCTAAAGAAATA
TCCATGCTTTCAAGATCACAGaatggtAATCCACGAAGCATTTCAAGTAA
TCGAACACgaacgaaaaatcaaaaagctaACGAATTGCAACACCGACCGA
CTAGAGGTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTTCA
GATGATGCCTAAAGACAATAAGCCAGggAGATTGCAGCCACAAGACTAAA
TGAAGAAAAGCGGTTTTGACGTCCATCTGCTGGAGATCAAGATCACGATG
GGCAGCAACTTGGATAAGGGGACAAATGGACCTGGATGTATGGAACGAGC
CATTATCACCACTCCAGCCATGCATGAAAAGATTGTGCAAAAGATTGGAG
CTGAATATGCGAAGAAGAAATTCGACCTACAAACTTTGATATCGTACATA
GACCAAGACTACAAATTTAGACGCTCGTTTATTGCCGGACTTGCCAAGAA
TAAAGATCACCATGTGGAGGTGCTAAAGAAATATCCATGCTTTCAAGATC
ACAGaatggtAATCCACGAAGCATTTCAAGTAATCGAACACgaacgaaaa
atcaaaaagctaACGAATTGCAACACCGACCGACTAGAGGTTGAAATCGA
CCATTTAATAACATGGGCAACTCTAAAACTTCAGATGATGCCTAAAGACA
ATAAGCCAGggAGATTGCAGCCACAAGACTAAATGAAGAAAAGCGGTTTT
GACGTCCATCTGCTGGAGATCAAGATCACGATGGGCAGCAACTTGGATAA
GGGGACAAATGGACCTGGATGTATGGAACGAGCCATTATCACCACTCCAG
CCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCGAAGAAG
AAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGACTACAAATT
TAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACCATGTGG
AGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGaatggtAATCCAC
GAAGCATTTCAAGTAATCGAACACgaacgaaaaatcaaaaagctaACGAA
TTGCAACACCGACCGACTAGAGGTTGAAATCGACCATTTAATAACATGGG
CAACTCTAAAACTTCAGATGATGCCTAAAGACAATAAGCCAGggAGATTG
CAGCCACAAGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:985294..989698 + |
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