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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:983451..990526+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11398.3.p1 ID=MSTRG.11398.3.p1|Name=MSTRG.11398.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7076bp|location=Sequence derived from alignment at sc0000082_pilon:983451..990526+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGCGCCAAGTTACACGAGTTCCCTTTTTGCCTAAATCTGCCCCAGGT
TTTATATCTCAGGATTTGAAAgtgctattgacttgaaattttgactagtG
TTAGGTATTGGCAATACAATATACAAGCTTGCTGTCAAAATTTGAGCGAA
ATCGGATAAGTGGTTATGCAGAACGTGAGCATTTTGGGTAAAATactgac
cggtctgtaaaataccaactaCGCAGGGGACagaactgaaattttgcaca
ctgccTTATATGGTTAATATCTATCACTGGTGAAAGTCTCAAGTCAAAaa
ctatattttattttatagaaatgtcgcaggtctattgacctctatgaaac
aagattaaaattttataatgcagtagcgtagacaagaggggcgcaaactt
tgtgtaggagagcatgTTGAGTTCATGGAAGACATGGTAGTGGACAGCAT
TGATGGAAGAAATAAATCTGGAGACAAGTTGATGTACAAGTAAATAAACT
ATCTTCTTCTTACAGCAGTTTAAATCGAAGTTAGAAGCTCGCAACTGTGG
TACCATTTTGGTACGGGAAAAAGAAGACTAGAGCCGAGACATGTGAGACT
AAATGTCCGGTAACGACTAATATAAACAAAAgcagaaaacgaaagtggtc
gtCAAATTATCGACACCCCAACTTGACGACTACTtcgacaaaaatgcaaa
aaatgtatacataacaaaattcctaagcaaaaaatagcctaaaaaataat
caatctagattccaaagataaaatCTGAAGATTTTTCCAATAGAAATTTC
TTGGGCGGTTTTGTGAATATGTCCGCACAATTGTCATTTGATGGAATATA
GTTATAGTTAATCAGGTTAGTGTTCTGACACTCACGTACAAAATGGAAAC
GGATATCAATATGTTTCGCCTTTGAGTGATTGGTAGGATTTTTGGACAAC
GCTAGGGCTCCTTGGTTATCACAATACATAATAGCATATAACTTTTCACT
TAACATCTCATTAAGCAAATTTCGCTTTAAATAAACAATTTCCTGCGAGG
CGATTGACATAGCAACATATTCTGCCTCACATGTGGATAATGCAATACAA
TTTTGGCGTTTCGATTTCCATGGAATGGGAGGACCAGCAGGATTTAATGC
AATACAGTAACCAGAAATACTTTTCCGATCCTTCGAGGCAGCCCAATCAG
AATCGCAGAAGGCAGTGATTTGCAATCCGTCGGTCGATTTCGTATATTTC
AAACAATAATTTGATGTCTTTTGCAAATAACGGAATACATGTTTCAGCAT
CATCAAATCAGCTGCTGTTGGACACGATAACTTTTGTGATAGTTTCGTAA
CTACATAACTCAGGTCGGGTCGCGTGCAGACCATGGCATAGATAAGGCTA
CCAACCATTTGACGGTAGGAGGTTTGGTCGACTGGCTCGTCTCCTTCCTT
TTCGTACACTTCCGGATTCGGTTCACAAGGCGTTGCACGTGGTTTACAGT
TGGACATGCCAAATCTCTTGAGGATCTTCAAAATATACTCCTCCTGACTC
ATGAGGATTTGGCCTTTAATGCGACAGAAATCGATGCCGAGAAAATGCTT
CAACATTCCAAGATCTTTCATTTTGAAGGCTTGGCTCAGGTGCGATTTGG
TGTCGGTCATTAACGTTGGATCATTGGACGCAAGCATGATATCATCAACC
CATACAAGTAAATAACTAACGGAATCATTGATTGATTTTGTGAAAAGGCA
AGGGTCAGCTTTCGATTGAACAAACCCATTGTCCTTAAGATGATCATGAA
AAGTGGAATTCCAATTACGACCACTTTGTTTAAGTCCGTACAAGGATTTC
TGTAGTTTCCAAACAAAAGCAGGGTTGGTTGGCTTGTATCCTTCTGGTGC
GTTAACATAAATCTCCTCCTCAATAGGTGCATGAAGAAAAGCGGTTTTGA
CGTCCATCTGCTGGAGATCAAGATCACGATGGGCAGCAACTTGGATAAGG
GTACGAACGGTTTCCATTCTGGCTGTAGGTGAAAAAGTCTCATGGTAATC
GATACCTTCAACTTGAGAGTATCCTTTTGCAACAAAACGAGCTTTGAAAG
TCGGGTTTTCAGGGTCACCTTTCAAATTAAAAACCCATTTTCCCCCAACT
AACGATTTATTGGAAGGAAGCTCTTTTTCGATAAATGTGTGATTCGATTT
CAAGCTCTCAAATTCATTGTCCATAGCTTGTTTCCATTGCTTGGCTTCTG
GACAGGACAGGGCTTCTTTGAAGGATGCAGGTGTGTTAACGTGGTAACAA
TAATGCACGAATTTGGCAGCGTCAATTTCATCAGGTTCATTCTTTGGTTC
ATCTGGGATTGACGGTTGTTGACGTGATCTGAGAGGATACGATTTCCATG
GTTCAGATTTAGCGGTTACGGTCATAGGCTTATCGTCAGATGGATCTGGT
TTGACGGTCGGTTCATCAGCAACTGGTAAGGTATCGTCAGCAACTGGTAT
TTGGTTGACTGTGGGTAGAAATTTTACGAGACGATGTTTTGAGACTGCTT
TGGTTTCAAGGTCATAGACTAGGTAGCTGGGACTATCTCGATCGTATCCG
ACAAAGACTCCTTTAGATGTCCTGGGATctagtttctttggtttgatgGT
GATAGGATAACAAATCGATCCGAAAACTTGAAGTCGAGCAACGTCTGGTT
TGGAACCGGTAATAAGTCCATACGGAGTGTTCTTAGTCCGCTGACTGTAG
CATCGGTTACGGATGTGAGTTGCAGTCATGACGGCATACGTCCACAGATT
CTTGGGTAAACCTGCCTCTAACAATAATGATCTAGCCATTTCAAACAACG
TGCGCCAACTTCTTTCAGCGGTACCATTTTGATGAGGTGAATATGGGGCA
CTCTTCTCATGTTTGATTTTATGCTTAATCAAAAGATCACTGAACTCATG
AGAAATGAACTCCCCACCATTATCTGATCGAACACGTTTTGGCTCTCCTG
ATGGAAAAATGTCCTCATGAAAACTTTAACCTTTCCCATACGGGGCAACA
TCAGCTAAGAATTTTTCTGTGGCACGAGTGGTGTCTGATTTCTCCTTGAG
AAAATAGGTAAACATATTTCCTGAATAATCGTCAGTAAACACAATGGCAT
ATTTGAAGCCATCCTTAGCAATTGGATCTATAGGTCCAGAGAGGTCGGTG
TGAATCAGTTCAAATGGCTCAGTTGCTCTTACGTCTGGGTTACGGTTGCG
AGTATTCGGTTGTTTGGCCATGATGCAGGTTTCACAGTCAAATTTGGTTT
GGCTGTCACTGATTTTCATTCCCTGGACTACGCTCTCCATCTTCAGGATG
TCAGCCGTGTTGCAGTGACCAAGAATACGATGCCACGTTTGAAGGCTCTC
TGAACGATTAGAGTTGACGACTGACTTGCAAAGGTAATACAAAcgttttt
cttggaaaattggaaaaatagttCCATTTGGTGCGATAAGTTCATTCCTA
TCCTCCGAAAATATTACTCTACAACCGTGACTTGTGGCTGATTTAACAGA
AAAAATGCATTGTGGAAAGTCTGGAATAAGCAAAACATCTCTCAACTTTA
CTTCAACAAATTCATTTTCGTTGGTTCGAAATTTGGTAATAACAGTTCCC
TTCTGTTTAGCCACACCATTCACTGTTGTACCATCAGCTAATTCGATATA
GTGGTCACTTGATTTGAATGTCGAATCAACGTCTAGGAAACACGACTTGT
CATTCACTATGTGAGTAGTAGCACCACAATCAACGAGAAACGTATTCGAG
CTAGCTTCAATGTTTGACTTTGTATCACTAGCTTTGAAAGCAAAAGAGTG
ATCTTCTCCTTTGGTGGACGTTTTGTTTGCACTGTCCTTTTTCTTCCTAC
ACTTGTTAGTGTTGTGACTTTTGTTTTTACAGATACTACACCACCGACCT
TTACTCTTTTTGTCACAGCTGGTTGATTTGTGTCCTGGAGTTCCACAGGA
GTAACATACGATTGGTTTCCTTCCTTCCTGGGCATAGAGTTTCATTATGG
CGGAGGATTGATCAGTAGGGTTAGATTGGGTTCTCAAATTTTCGGTTTCT
TCAAAATGTCTAAGAgaagttttaaattttgcaaaGTCAGTAACATTTTC
TGCTTGAGTTGTAACTGCCACAAAAGCCTTGTACTCGTCTGGTAAGCCTT
TTAAAACCATTGCAATCAATAACGAGTCACTCCCATTCATCAATCAACCT
ACAGGCCCATTATAAATTACCTTTCTGGACATTTTGCTTAGCTTAAaagg
aaaagtttttcttttgtattttctaagTATCTTTATCTTTTAAACAGGGA
CAAATGGACCTGGATGTATGGAACGAGCCATTATCACCACTCCAGGTATG
TGATTTTGCAGCATAGACAATAGATAACCTGAATTATTCCAATTATGTCT
TCCAAATTGATGTCTGCGGTTACTGTTTTGTTGCTTTTCTTGACCCATGT
CAATAGGGAAAAGGATAATAACCAAAATGTCTTTCATTCTTAGCCATGCA
TGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCGAAGAAGAAATTCG
ACCTACAAACTTTGATATCGTACATAGACCAAGACTACAAATTTAGACGC
TCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACCATGTGGAGGTGCT
AAAGAAATATCCATGCTTTCAAGATCACAGaatggtaatttttttcttct
tctttgaatGGGTTAGATGCTTTCAAAGCTATCATTATCAAAGATGTCTT
TGTGCCTTGGATCTTTTCTTACTAAATTCCCCTTATAAGCATAAGCAGAT
TTGCTGATTACTTAGGCATAGCAAGCATACAGgcctgaaaataattttgt
aaaGTTTACAAAGTTTGCTCGAATATATTCCCCTTAAACAGGAGACATAG
CCTTTACTTTGCACTTATTTTCCATGTATTAAACCGATAAGCATACTACA
CGCATGATATTCAGCCTGGATTCGAGCCTGACCTAGCCTGACCAAAGGGC
ATACACTATAAATACGTATATGTTTGGAACTCTTTCTCCCCTGGACGTTT
ATTTTAGCCCAGCTTTTCCTATATACGTTTATTCAAGTTCCATGTACGTC
TATTTATTCAAGTTCTGATTTCACGTCTGTACGTTGTTTATTAAGTCCAG
TTTGATATTATCTTTTGTATGTTTACTAGAGACTCGAGAAGTTTTACCAT
TCATACAGGATTTAGTATAAAAGTTTGAGATTTCCATTCAAGAACTccca
aatttcaaattcaggtAATCCACGAAGCATTTCAAGTAATCGAACACgaa
cgaaaaatcaaaaagctaACGAATTGCAACACCGACCGACTAGAGGTTGA
AATCGACCATTTAATAACATGGGCAACTCTAAAACTTCAGATGATGCCTA
AAGACAATAAGCCAGGTAATTAAAAACTCTTGTCACCTTTAAGGTAGAAA
TTTTGGCGCTCAGAGATAAAAAATTCCTTAAACCTCAAAACCTGGCAAAA
cttctaccttaagggaactaatttttgcggattTGGGCccaaaccgcaaa
atttagttcctGAAAATTTATCACATGCGAAAAACTGGTCAAATAAATCA
CAAAATAGCTCTAATTTTCTTCCAAGTGAGAATCCCGCTAAGTtaatttc
ccgcaaaaaatctcaaaattgcgaaccgctaaaattagttccctcaaAAA
AGGTAATTTCAAGATTGTTTGATTcatcttttataaaataacatTTCCTT
TCcacaatccttcaagaaatatttgaaacaaagGGGaattcccggtgtaa
ttttgaacaccacaattgatttttaagcgccttaaactacagttggaaag
tagagttttaactctgagttttaacatgagacttaagacttaggagctta
ggatctcaggatttaaaagctcaaatttgctcgaatgaggcttggaatat
agcctagaagccaccaaacccttctaaaatcgaaatattcaatggaagaa
agtggaagtgctaaaatagcaattctcgcccgaactttaaattctgaaaa
acgttaaaatacactaaaatctcaatatatttcaagggAGATTGCAGCCA
CAAGACTAACGTTTTTACTCAACAACCTACCATGCATCATTGGGAATAAg
caaaaactttcgaaaaaactTGTACACGATGTTGCTTATTCTGACAAAGT
AAGTGTCaaatttagttttaaaatttcactGCATCATCAAATAAGGGGTT
TTATTTAAGTAACTATTTAATTAACTAACTtttatttaacgttcaaatTC
TAAAATACAGTACTTTTACTTACAATGCCCCCTACAATCAGACACACATG
TACATATCCATATGTACATTCTACCGTGAGATagaaaactttcactttga
aTTGACTAATGTTTcagtttacaatttttttattagaatgcCGAATGTTA
TGTACATCGTTAACTTTTTCCTTTCCATTTTCCAGAACCGTCCAAACGTG
CAAGTTTTATCGAATTTCGATCAAATAGTAATGGtttatgaagaagaaaa
aatgaagctgTTTCTCAGAGGAAAACATCTTACAACAGTCTCCTTAGTAG
ACGCTGTGCCAACCATGTTGGCTTACTACTATCTTTTCGACATGGATTAC
CCGCTTAATTATGATACTGGTTTCCATTTTTTGCAATACGTTATCTTTGG
TGATTCTATCGTCCCAAAGAACTTGGAGAAAACGTTGGACAATTTCAACG
ACGCATATTCTAAATTTAAGATTGAACGGTTGAGACAGTAGTTGGTGATT
CTATCGTCCCAAAGAACTTGGAGAAAACGTTGGACAATTTCGACGACGCA
TATTCTAAATTTAAGATTGAACGGTTGAGACAGTAGTTGCCGAGTTATAT
TTTGATTAGGttttttttGCATAACGTTATATTTCATGTACATACAGATG
CGGTAGTTGCCGAGTtatattttatcttaatttttttgcattACGTTATA
GTTCGTTCACTCTAACTTGGTTAATG Coding sequence (CDS) from alignment at sc0000082_pilon:983451..990526+ >MSTRG.11398.3.p1 ID=MSTRG.11398.3.p1|Name=MSTRG.11398.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3885bp|location=Sequence derived from alignment at sc0000082_pilon:983451..990526+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACGAGCCATTATCACCACTCCAGCCATGCATGAAAAGATTGTGCA
AAAGATTGGAGCTGAATATGCGAAGAAGAAATTCGACCTACAAACTTTGA
TATCGTACATAGACCAAGACTACAAATTTAGACGCTCGTTTATTGCCGGA
CTTGCCAAGAATAAAGATCACCATGTGGAGGTGCTAAAGAAATATCCATG
CTTTCAAGATCACAGaatggtAATCCACGAAGCATTTCAAGTAATCGAAC
ACgaacgaaaaatcaaaaagctaACGAATTGCAACACCGACCGACTAGAG
GTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTTCAGATGAT
GCCTAAAGACAATAAGCCAGCCACAAGACTAACGTTTTTACTCAACAACC
TACCATGCATCATTGGGAATAAgcaaaaactttcgaaaaaactTGTACAC
GATGTTGCTTATTCTGACAAAAACCGTCCAAACGTGCAAGTTTTATCGAA
TTTCGATCAAATAGTAATGGtttatgaagaagaaaaaatgaagctgTTTC
TCAGAGGAAAACATCTTACAACAGTCTCCTTAGTAGACGCTGTGCCAACC
ATGTTGGCTTACTACTATCTTTTCGACATGGATTACCCGCTTAATTATGA
TACTGGTTTCCATTTTTTGCAATACGTTATCTTTGGTGATTCTATCGTCC
CAAAGAACTTGGAGAAAACGTTGGACAATTTCAACGACGCATATTCTAAA
TTTAAGATTGAACGGTTGAGACAGTAGATGGAACGAGCCATTATCACCAC
TCCAGCCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATATGCGA
AGAAGAAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGACTAC
AAATTTAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATCACCA
TGTGGAGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGaatggtAA
TCCACGAAGCATTTCAAGTAATCGAACACgaacgaaaaatcaaaaagcta
ACGAATTGCAACACCGACCGACTAGAGGTTGAAATCGACCATTTAATAAC
ATGGGCAACTCTAAAACTTCAGATGATGCCTAAAGACAATAAGCCAGCCA
CAAGACTAACGTTTTTACTCAACAACCTACCATGCATCATTGGGAATAAg
caaaaactttcgaaaaaactTGTACACGATGTTGCTTATTCTGACAAAAA
CCGTCCAAACGTGCAAGTTTTATCGAATTTCGATCAAATAGTAATGGttt
atgaagaagaaaaaatgaagctgTTTCTCAGAGGAAAACATCTTACAACA
GTCTCCTTAGTAGACGCTGTGCCAACCATGTTGGCTTACTACTATCTTTT
CGACATGGATTACCCGCTTAATTATGATACTGGTTTCCATTTTTTGCAAT
ACGTTATCTTTGGTGATTCTATCGTCCCAAAGAACTTGGAGAAAACGTTG
GACAATTTCAACGACGCATATTCTAAATTTAAGATTGAACGGTTGAGACA
GTAGATGGAACGAGCCATTATCACCACTCCAGCCATGCATGAAAAGATTG
TGCAAAAGATTGGAGCTGAATATGCGAAGAAGAAATTCGACCTACAAACT
TTGATATCGTACATAGACCAAGACTACAAATTTAGACGCTCGTTTATTGC
CGGACTTGCCAAGAATAAAGATCACCATGTGGAGGTGCTAAAGAAATATC
CATGCTTTCAAGATCACAGaatggtAATCCACGAAGCATTTCAAGTAATC
GAACACgaacgaaaaatcaaaaagctaACGAATTGCAACACCGACCGACT
AGAGGTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTTCAGA
TGATGCCTAAAGACAATAAGCCAGCCACAAGACTAACGTTTTTACTCAAC
AACCTACCATGCATCATTGGGAATAAgcaaaaactttcgaaaaaactTGT
ACACGATGTTGCTTATTCTGACAAAAACCGTCCAAACGTGCAAGTTTTAT
CGAATTTCGATCAAATAGTAATGGtttatgaagaagaaaaaatgaagctg
TTTCTCAGAGGAAAACATCTTACAACAGTCTCCTTAGTAGACGCTGTGCC
AACCATGTTGGCTTACTACTATCTTTTCGACATGGATTACCCGCTTAATT
ATGATACTGGTTTCCATTTTTTGCAATACGTTATCTTTGGTGATTCTATC
GTCCCAAAGAACTTGGAGAAAACGTTGGACAATTTCAACGACGCATATTC
TAAATTTAAGATTGAACGGTTGAGACAGTAGATGGAACGAGCCATTATCA
CCACTCCAGCCATGCATGAAAAGATTGTGCAAAAGATTGGAGCTGAATAT
GCGAAGAAGAAATTCGACCTACAAACTTTGATATCGTACATAGACCAAGA
CTACAAATTTAGACGCTCGTTTATTGCCGGACTTGCCAAGAATAAAGATC
ACCATGTGGAGGTGCTAAAGAAATATCCATGCTTTCAAGATCACAGaatg
gtAATCCACGAAGCATTTCAAGTAATCGAACACgaacgaaaaatcaaaaa
gctaACGAATTGCAACACCGACCGACTAGAGGTTGAAATCGACCATTTAA
TAACATGGGCAACTCTAAAACTTCAGATGATGCCTAAAGACAATAAGCCA
GCCACAAGACTAACGTTTTTACTCAACAACCTACCATGCATCATTGGGAA
TAAgcaaaaactttcgaaaaaactTGTACACGATGTTGCTTATTCTGACA
AAAACCGTCCAAACGTGCAAGTTTTATCGAATTTCGATCAAATAGTAATG
GtttatgaagaagaaaaaatgaagctgTTTCTCAGAGGAAAACATCTTAC
AACAGTCTCCTTAGTAGACGCTGTGCCAACCATGTTGGCTTACTACTATC
TTTTCGACATGGATTACCCGCTTAATTATGATACTGGTTTCCATTTTTTG
CAATACGTTATCTTTGGTGATTCTATCGTCCCAAAGAACTTGGAGAAAAC
GTTGGACAATTTCAACGACGCATATTCTAAATTTAAGATTGAACGGTTGA
GACAGTAGATGGAACGAGCCATTATCACCACTCCAGCCATGCATGAAAAG
ATTGTGCAAAAGATTGGAGCTGAATATGCGAAGAAGAAATTCGACCTACA
AACTTTGATATCGTACATAGACCAAGACTACAAATTTAGACGCTCGTTTA
TTGCCGGACTTGCCAAGAATAAAGATCACCATGTGGAGGTGCTAAAGAAA
TATCCATGCTTTCAAGATCACAGaatggtAATCCACGAAGCATTTCAAGT
AATCGAACACgaacgaaaaatcaaaaagctaACGAATTGCAACACCGACC
GACTAGAGGTTGAAATCGACCATTTAATAACATGGGCAACTCTAAAACTT
CAGATGATGCCTAAAGACAATAAGCCAGCCACAAGACTAACGTTTTTACT
CAACAACCTACCATGCATCATTGGGAATAAgcaaaaactttcgaaaaaac
tTGTACACGATGTTGCTTATTCTGACAAAAACCGTCCAAACGTGCAAGTT
TTATCGAATTTCGATCAAATAGTAATGGtttatgaagaagaaaaaatgaa
gctgTTTCTCAGAGGAAAACATCTTACAACAGTCTCCTTAGTAGACGCTG
TGCCAACCATGTTGGCTTACTACTATCTTTTCGACATGGATTACCCGCTT
AATTATGATACTGGTTTCCATTTTTTGCAATACGTTATCTTTGGTGATTC
TATCGTCCCAAAGAACTTGGAGAAAACGTTGGACAATTTCAACGACGCAT
ATTCTAAATTTAAGATTGAACGGTTGAGACAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:983451..990526 + |
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