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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:789436..791919+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11393.4.p1 ID=MSTRG.11393.4.p1|Name=MSTRG.11393.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2484bp|location=Sequence derived from alignment at sc0000082_pilon:789436..791919+ (Clytia hemisphaerica_ch_hm2_pilon)
agttttagattgaaaaatgcagaaaataAATGCAAGTAAGATAATCAATA
AATGGTCAACACACAATTCAGGAAATGTAAACGCAATAGAATTTGAATCA
GCACCAGCGCTAGATGAAATAGGAacagaattttcaagaattaACAGAAG
ACGCAACATTGCTTCACACAGAGGacaaaaaagagacaaaaatgtttgtt
ttacaTTTGTTTTTCTGATATGAAAATGTAtgactatgaaaaaaaaaatc
acttttaaatgGGTTTCAAAGGACGTTATAAGATACAATTCTTTACGATT
GAATATTATGAATGCACATTTTTATCCaaagaaaattaaaggaaaaaaga
tgaaaaattgacaatcaaactgaatattttttttgttttcaggcaTTATT
GGTTGAAGAAGCTGTGCAAAAGTCAAAGAAGTTTTCCTTGGTGTTGCCAG
TTTTGAAGAATCCATCAAAAGAGTATACTATTTATTCTTGCAAGAGTTGT
TCGGTAAGAATAATCGTAGTTGTCCTTGTAGTTTTATGCATTCCACCTTC
CTAAAgttctaaataataaatctaAGTCTCTCTTTTAATTTGTATTCCAC
CTTCTAAATGGTTCTGTTCAACACTAATGAGTGCTTAATGATTTGAATTT
GCTAAAAAGCCCAAAAACAGTTTGGAATAGCTTTCATACTTTCAAATGTT
TGGATATGTTTCAATCCCGCCctcattttttaatttgtgaAGTATCATCA
ACTGCatcctttttttcctttttcggccaaaattttttacttttactctT
AACCTTGTACATTTTATTAATCCAATTTAGGCACCCATGAGTATCTTTCT
AACTTGATTCAATTCAGattttttgtaatatatgttcttACAGAATTTGC
TGGAGTTTACAGATGCCCCTGTCACTCAGTCAAGCACCAAAACAATCAAC
TTGCTTGATCATATCACAAGAAAAACCAGGTATTAGGAAAACAAAACTTT
gcaaagaatattttgaatcaGATCAGTTCATTTTGttgtacaaaaaataa
taaaataacttTTCATTGAATGGATCTGATGATTTTCATCAGGATTAAGC
CAAATTGCAACACTTTTTCTTAGTGGACTAGTAACCTTACAAACTATTAA
ACTTGTGTTTTGATTCAACCTCTATGTTCTTATCTCAGGAAGTCTTATCT
ACATTGGATAGCACCCACTCTTGTCTTTatgtcaaaagaaaaacaaagat
tcaaTGGAAGAggtgaaaaatatttaactATTCTTACAAATTATGATAat
ttggatttatttttaatgtacagtattctcattatctatttttattttag
attatttaGCTGTGAAAGTGTACATAACACTAATACCACTAATTTTTGTG
TCAATCTCTTTACTGACTTTTAAAATCAACAAATGCCTTTGCAAAACCTT
CAAAATCACTAATTTTCTACATGATAAAGTTCTgaaagaagacaaaaaat
ttGTGAAACTGAGTTTATTGTACTTTTTGTTAGtccaataaatttttatt
tgtttttagatGAAGTCTCAAAACCATCTTTTATACATTGGtaaatttgt
ttgttattttgtcTATCTTACTCAAATTATCTGGTTTGTCTGTGCCTACA
TGAAAGGAGGTTACACATAAcaggggggggttgtacttttacggtgtgac
gggattgacccttttttagtacggtattacgagatttgacaaaaaaagag
acgggaaaacggtattttaaaatcagacggtgacggtatttaggtacatt
tttgccctgtacaagccggtgtgacggtgtcattatttttccaattttca
ggattccgggattcagcaaaaattttgacgggaaaacggtatttcgaacc
cctaccaACCCTCCCATAACATTGTTCGGTTTTTACTGTAAGGTATATAT
CTGATTAACATGACACTCCTACTTTAAACCTTGTTTTAGCTGACGTTACT
gtataaaaaacaacattttgtgtACTGTTCTATTAAGCTTCTTCACTTGG
CATACCATGAAGAATTTGGCAAGTTATTTCAATGCAATATGCGTTCAACG
ATCAGATCAACTGTCATTGAGAGCAGCTAGAAAGGTACAATTAAGGGGTA
GAGGTTACCTCTAAGAAATGTTcaactaaaaagaaaagaacTGATTTTCA
CTAGAACTAATGATTTCCCTCACTTTGTTTCCGTTTCTAGGTGTCTACTA
CAGAACAAATAAGATCTGCAACAtgcattttcaaacttttactttCCACT
CTAATACTGCGAGGCTGgcatttttttaatcgtagatTTTAATTTAGAAT
TGATTTGAGGAGTTGTAACTCGAGTTATAAATCTTTGATTTTAGAAAGAG
CATCCAGTTGTGTTTgttcattcagaggaaagcttTTTTGGGTCAGTTCT
CCTGCATATCTACTTAGCATGTGTTGATACTCAG Coding sequence (CDS) from alignment at sc0000082_pilon:789436..791919+ >MSTRG.11393.4.p1 ID=MSTRG.11393.4.p1|Name=MSTRG.11393.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2355bp|location=Sequence derived from alignment at sc0000082_pilon:789436..791919+ (Clytia hemisphaerica_ch_hm2_pilon)
atgcagaaaataAATGCAAGTAAGATAATCAATAAATGGTCAACACACAA
TTCAGGAAATGTAAACGCAATAGAATTTGAATCAGCACCAGCGCTAGATG
AAATAGGAacagaattttcaagaattaACAGAAGACGCAACATTGCTTCA
CACAGAGGacaaaaaagagacaaaaatgcaTTATTGGTTGAAGAAGCTGT
GCAAAAGTCAAAGAAGTTTTCCTTGGTGTTGCCAGTTTTGAAGAATCCAT
CAAAAGAGTATACTATTTATTCTTGCAAGAGTTGTTCGAATTTGCTGGAG
TTTACAGATGCCCCTGTCACTCAGTCAAGCACCAAAACAATCAACTTGCT
TGATCATATCACAAGAAAAACCAGGAAGTCTTATCTACATTGGATAGCAC
CCACTCTTGTCTTTatgtcaaaagaaaaacaaagattcaaTGGAAGAgCT
TCTTCACTTGGCATACCATGAatgcagaaaataAATGCAAGTAAGATAAT
CAATAAATGGTCAACACACAATTCAGGAAATGTAAACGCAATAGAATTTG
AATCAGCACCAGCGCTAGATGAAATAGGAacagaattttcaagaattaAC
AGAAGACGCAACATTGCTTCACACAGAGGacaaaaaagagacaaaaatgc
aTTATTGGTTGAAGAAGCTGTGCAAAAGTCAAAGAAGTTTTCCTTGGTGT
TGCCAGTTTTGAAGAATCCATCAAAAGAGTATACTATTTATTCTTGCAAG
AGTTGTTCGAATTTGCTGGAGTTTACAGATGCCCCTGTCACTCAGTCAAG
CACCAAAACAATCAACTTGCTTGATCATATCACAAGAAAAACCAGGAAGT
CTTATCTACATTGGATAGCACCCACTCTTGTCTTTatgtcaaaagaaaaa
caaagattcaaTGGAAGAgCTTCTTCACTTGGCATACCATGAatgcagaa
aataAATGCAAGTAAGATAATCAATAAATGGTCAACACACAATTCAGGAA
ATGTAAACGCAATAGAATTTGAATCAGCACCAGCGCTAGATGAAATAGGA
acagaattttcaagaattaACAGAAGACGCAACATTGCTTCACACAGAGG
acaaaaaagagacaaaaatgcaTTATTGGTTGAAGAAGCTGTGCAAAAGT
CAAAGAAGTTTTCCTTGGTGTTGCCAGTTTTGAAGAATCCATCAAAAGAG
TATACTATTTATTCTTGCAAGAGTTGTTCGAATTTGCTGGAGTTTACAGA
TGCCCCTGTCACTCAGTCAAGCACCAAAACAATCAACTTGCTTGATCATA
TCACAAGAAAAACCAGGAAGTCTTATCTACATTGGATAGCACCCACTCTT
GTCTTTatgtcaaaagaaaaacaaagattcaaTGGAAGAgCTTCTTCACT
TGGCATACCATGAatgcagaaaataAATGCAAGTAAGATAATCAATAAAT
GGTCAACACACAATTCAGGAAATGTAAACGCAATAGAATTTGAATCAGCA
CCAGCGCTAGATGAAATAGGAacagaattttcaagaattaACAGAAGACG
CAACATTGCTTCACACAGAGGacaaaaaagagacaaaaatgcaTTATTGG
TTGAAGAAGCTGTGCAAAAGTCAAAGAAGTTTTCCTTGGTGTTGCCAGTT
TTGAAGAATCCATCAAAAGAGTATACTATTTATTCTTGCAAGAGTTGTTC
GAATTTGCTGGAGTTTACAGATGCCCCTGTCACTCAGTCAAGCACCAAAA
CAATCAACTTGCTTGATCATATCACAAGAAAAACCAGGAAGTCTTATCTA
CATTGGATAGCACCCACTCTTGTCTTTatgtcaaaagaaaaacaaagatt
caaTGGAAGAgCTTCTTCACTTGGCATACCATGAatgcagaaaataAATG
CAAGTAAGATAATCAATAAATGGTCAACACACAATTCAGGAAATGTAAAC
GCAATAGAATTTGAATCAGCACCAGCGCTAGATGAAATAGGAacagaatt
ttcaagaattaACAGAAGACGCAACATTGCTTCACACAGAGGacaaaaaa
gagacaaaaatgcaTTATTGGTTGAAGAAGCTGTGCAAAAGTCAAAGAAG
TTTTCCTTGGTGTTGCCAGTTTTGAAGAATCCATCAAAAGAGTATACTAT
TTATTCTTGCAAGAGTTGTTCGAATTTGCTGGAGTTTACAGATGCCCCTG
TCACTCAGTCAAGCACCAAAACAATCAACTTGCTTGATCATATCACAAGA
AAAACCAGGAAGTCTTATCTACATTGGATAGCACCCACTCTTGTCTTTat
gtcaaaagaaaaacaaagattcaaTGGAAGAgCTTCTTCACTTGGCATAC
CATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:789436..791919 + |
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