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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:671054..674371+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11385.2.p1 ID=MSTRG.11385.2.p1|Name=MSTRG.11385.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3318bp|location=Sequence derived from alignment at sc0000082_pilon:671054..674371+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTACAAGAATAAAACATTTTGGTTTTATAGTGATTTTATATGCAAGTCT
TCCTGACTAAAATTGACTCTACTTTTTTAGTGAAATATGGAATAAAAATA
GATGAGTACTGAATTCAATATGTCCCTGATCAAATTGAAAGGATGAAAAA
GAACAATGAAAAAGATAAGAATCAGTATATATGGCGTCTTTTCTGAAAAA
GACCTTGAAACAAAAGGTTCAAAAGTGGGCCATTTTTGGATTGGGATTTT
ACCTAGTTGGTCTTCAAGGCTTTCATGCAGCAGGCCAGTTCTTTGGAAAC
AGAAAAAATTGGCCTGTCACTGTTGCAGCTTTTGGGGCATTTGGGTTTCT
GTTGTATAATCAGGTATGTATGGAGAACTTTATTCTTTTTGGATTTGAGA
CAATTCACAGCCTACTAAAATTAAAACTCAGGAAAATAACTGTTAAACAA
ATTGATAAGAATTAACAAAATGACCAAACAGCTTTAAATTCTGCTCCAAA
AAACTTAGTAGTCTGTACTATACCTAaaatggattaattttcgcgtgaac
tgatttttgcgagacgagaattaaaagattttgctgATTAATTGTCACGA
TTCaagggttttcaaaatttttgcgtggattaaattttgcaaaaatggcc
aaaattctcaaaaaacagaattaattaacacaaaaattaatccacttagg
TAATCGAGGGGGGAAAGATATAGCTTAAAGCAATAACTGGTTGGGAATAA
TGTTGTTCAGATTGATGTAATGTAAGCTTTGTAGAATCTtctaaaacatt
gaaaatgaagatggaaatgaaaaaaaaaagaatgaagatttttcagctca
accaaaaacttttattttatacttttctgaaaatttgaaacctcTGaaaa
aaaGTCCACATGTGCAATAAATTGCTAAAAATGGTCGAAATGGACCTTTA
ACAAGAAAATATAACTTTGAAAAGTTGtatgaaaaatctgaataaCATGT
TTGAAATCAGtggttcaaaattttagaaaagtattataaatttatttggc
agggtagaaaaatttttcatacgGTCATACAAAGTACAAATTGGTACTTG
TTGCCTCTCTGCTTAATTCTGAATATAGATAATATTATAGGTTAGTGGAG
TAATCCATTGAGAAAGAGTGGTGCCTTCCCTACCTTTTGGAATATGTATA
TTGAAAGAAGGGCTTTTGGGTCCCCTTGATTGATTCATAATTGCTTGTCT
TATTCTGCAGGCAAGAATTTTAAACTAGTTTCTAAGATTATTGGTTTACT
GTCTGATTTCTTACCAGATGAAAGCAATCCTTGTGACTTTGGGCTGTTTT
GTCTTGGTCCTGGTTGTTTTTGTCATTGCAGTTGGACTAATGTTACCAGA
GCAAGGCTATGATGGAGAATTTCATTGGGACCCTAGCGACGAGGatcttg
atgattttgatgaaaattagatTCTCTATTTACTAGTAAATACATCAACC
AGTTTTATTGTGGAGATTTCTGAAAAGCTAAAATATATACTGATTCACAA
TTGAAAATAAGAATAGAAATGTTAGCTTAAAATTGCTATGGTAACATTGA
ATTACTCTTTAATAGAGAATTTAGCAAGGCTTGGGCAGCGACATTTTGAT
TTACATTTAATTTTATAACAGAAGCTGTATACAAGGAGAGACTTTTGGAG
ACTTCTATATCATCACTGCAACACCTTAATGTAAATTTTCTTGTATATGC
TGGGAGGCTCAGCCACACTACAGTAGGAGGATCAGCCAGATACAATAATG
TTCAATACAGTGATAACAACTTACTACCCTTTTAATGTACATATAAAATA
TGTAATTTTTACAGTAAAACTCTCCATTTGATTATTAACACTCTAGAGCT
TCTAATAAAGTTACCTTACCCATTAAAATTAAGTGCCAGTtcctaaattt
tgaatttccgcCCCAAATAACAATATTTTGTTGCTTTCAGGGAAGCAGGC
TTATTTAATCACTTTGTCCAAAACCCAGTACATAACTTATAAGAACCTGG
CAATCTTATATTATTGAGCCCTTGCTAGTCTTGCTGGTCTTAATCCAGCT
CaatcaataaaaattcatttattttgaagaaatcaCATTGTAGGTACACC
AAAAAATGTTTAGAGAAAAGATTTCCATTTTGAGTTTCCAATTTtggatt
ttgttgtttttgccaCTAGTGGAATGCTCTCCAGGAGATCGTGATCCACA
CTTTCAATTATGCTCTAGAAAATGTATTGTAAATTGCATCAATCAGCAGC
ACAGCTTTCTGTCATGGGGATGTAAAGGAGAATGTGAATATGATTGTATG
TTTAGAATAACTGATGAAAGAACAAAACTTGGCCTTGATATACTTCAATA
CTAtggaaaatggccattttatAGGCTTTTCATTATTCAAGAACCAGCAT
CGTTCATATTTTCTGTCCTCAATCTGGTGTCTCAAATTATTGGATGGATT
cactattcaaaaaatgttgacagCAGCTTCAAGTTTTATGGACTTGCCAA
AGTGCAATCTTTTATCAATAGTGTTGCATGGACATGTGCTATTATATTTC
ATACACGAGACACTTATTGGACTGAAAAAATGGATTATTTTAGTGCAGCC
GCAGTCATTGGGGTCTCACTTTTCACCTGTTTTTCACACATCATTGGAGA
TATGGAATCATTTGCAACAAAATTTATTGGAGCACTAATATTGTCTGTTT
TCTCTTTCCACATTTACTATATGgcttttattcattttgattATGGATAT
AATATGAAATTCCTTGTATCAAATGGTATTATTAATATCACTGTATGGTT
TATATGGTCTTggataaatagaaaaaaacgacCAGTTGGCAAATGTGTAT
TGGTAATGGGAGGCACCTTACTACTAGCATCTTTAGAAGTTTTCGATTTT
CCTCCTATATTTTGGATACTGGATGGACATGCACTATGGCACTTTGGAAC
TATTCCTATACCTTTTCTATGGTTCAGTTTTTTGACTGAGAATGCTTTAT
TTGAAACATCAAAATCTTCCTtagattgattgaaaaattgtttttttaga
attagTTTTCTTCTTAGTTTGTCATCATACTGTACAAATTATAACGTGTc
actaaattaattttttgaaagtacAGCCTTGGCAAAAGATAAAAGTCAAG
AATAATCAAAGTTTTAATATCAATCTCAAAGACAAAATTGattctgaata
tttttttaactttgataATATTATTAATCCTTTACTTTTCTACTTAACTA
TTAGACattgaaataaat Coding sequence (CDS) from alignment at sc0000082_pilon:671054..674371+ >MSTRG.11385.2.p1 ID=MSTRG.11385.2.p1|Name=MSTRG.11385.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000082_pilon:671054..674371+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAGAGAAAAGATTTCCATTTTGAGTTTCCAATTTtggattttgtt
gtttttgccaCTAGTGGAATGCTCTCCAGGAGATCGTGATCCACACTTTC
AATTATGCTCTAGAAAATGTATTGTAAATTGCATCAATCAGCAGCACAGC
TTTCTGTCATGGGGATGTAAAGGAGAATGTGAATATGATTGTATGTTTAG
AATAACTGATGAAAGAACAAAACTTGGCCTTGATATACTTCAATACTAtg
gaaaatggccattttatAGGCTTTTCATTATTCAAGAACCAGCATCGTTC
ATATTTTCTGTCCTCAATCTGGTGTCTCAAATTATTGGATGGATTcacta
ttcaaaaaatgttgacagCAGCTTCAAGTTTTATGGACTTGCCAAAGTGC
AATCTTTTATCAATAGTGTTGCATGGACATGTGCTATTATATTTCATACA
CGAGACACTTATTGGACTGAAAAAATGGATTATTTTAGTGCAGCCGCAGT
CATTGGGGTCTCACTTTTCACCTGTTTTTCACACATCATTGGAGATATGG
AATCATTTGCAACAAAATTTATTGGAGCACTAATATTGTCTGTTTTCTCT
TTCCACATTTACTATATGgcttttattcattttgattATGGATATAATAT
GAAATTCCTTGTATCAAATGGTATTATTAATATCACTGTATGGTTTATAT
GGTCTTggataaatagaaaaaaacgacCAGTTGGCAAATGTGTATTGGTA
ATGGGAGGCACCTTACTACTAGCATCTTTAGAAGTTTTCGATTTTCCTCC
TATATTTTGGATACTGGATGGACATGCACTATGGCACTTTGGAACTATTC
CTATACCTTTTCTATGGTTCAGTTTTTTGACTGAGAATGCTTTATTTGAA
ACATCAAAATCTTCCTtagattga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:671054..674371 + |
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