MSTRG.11382.3.p2 (mRNA) -

Overview
NameMSTRG.11382.3.p2
Unique NameMSTRG.11382.3.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000082_pilon:639759..648565-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11382.3.p2 ID=MSTRG.11382.3.p2|Name=MSTRG.11382.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8807bp|location=Sequence derived from alignment at sc0000082_pilon:639759..648565- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGTTCTTTGGAAAAGAAAAATATTGCTTGTTTTTAAAAAAAAGTTGCA
AAATATTGCAATACAATGAATTGCACTCGAGTTGATCATGAATCAATAAT
TTGCAATGGAACATTATTTACAAAGCCTGAAGAACCATTGTCCCCACATG
ATTCTTTATTTTGGATCTACCTTGGTGTCTATATATTCTTAATGCTCTTT
GCTGGTAAGACATATTTATTTTTTATGTGTTCTTTATGAAAGCTAATTTT
AATTGATCAATGAGGTTGAACTTGATGGTTTATAGTCATATACTCCAAAC
CTGGTGTACGAAAAGGCTCGTCATCTCAGATAAGATTGGTGTTCAGTCGT
TTCCTCCAAGAAATAATGAATTAATCTTCATCTAGGCATAAGAATTAAAA
AAGAAAACATCTAAGATCATGCAAGAATTATTTTGTACATCACAATGTAT
CTATTTTTTTAGGTTTGATGTCTGGTCTAACCCTTGGATTGTTATCCCTT
GACGGAAATCAACTTAAAGTTTTACAAGCTGCTGGAAAAGAAAAAGAAAA
GAAATATGCACAGAGGATCGTTCCTCTTATTAAAAAGCACCATTTATTAC
TTGTGACACTTTTGCTAGCAAACGCAGGAGCTGTGGAAGCCATGCCTATT
TTCATGGATAAAATCACTAATCCAGTGCTTGCTATTTTGGTTTCAGTCAC
AGCTGTACTTATTTTTGGAGAGTAAGCACTTATTGTATCCAGCTTTCACC
AGTCAATCAACATTATTTTTTCACAACGTCTTTTTTTATTGACTTGTTTG
AAGGAATAGTGTTTCTTTCTACATACAATATCAAAACAAAAATATATAGA
TTATAAGTTGTTTCCTTAAAACATTAAAAAAATAATGCTTCCCAATAGTA
TTTTTAAAAAGATTTGTGCTATGTTATGATCTAGAAAGTTGTAATTTGTT
TTGCTTTTTTTGACATTTCTTGTTAGCATGTTATTAAAATATCCTTGTTC
TTTCTGAAAGTCTTTTAAAATACCATGTGTATCTTTACTACTAATTTGAA
TGTTTTTCTTTTCATAGAATTATTCCACAGGCTCTCTGTTCAAGATATGG
TTTGGCAATTGGGTATTATTTGTCACCGTAAGAAATGTATTACTTTTGCT
TACTGCTAGTTATTAACTGACATTAGATAGATGAATTTTAGGGAGTCAAT
CCTCAGGATCCTAACTACTACCGTAGCAAATAATGGATGATATTTTTTTG
GATTCTTTTTTAAAAATGAAGTCCTAATCTTAATGTTGTTTATTCCTTTC
AAAGGTTGGTTTACTTTTTGATGTTTATCTTTTTCATTGTTGCTTGGCCA
ATATCTAAGCTTTTGGATTGCTTGCTGGGAGAAAATCATGCCACCTATTT
CAGAAGAGCAGGTCTCTATTTTATTCCCTTATTACACTTGTATATCTAAT
CAAATGTTTAACACAGGGAAGAGGAGTGCAATAATTTATTAACACATGGT
AGAGCTGTTTGGTATTAAAGATAAAAAATTAAAAGCGAATTGGCTGTTAC
AATGTAAAAATTAACGGAATTTTTTCAACATGACCAATAATTAACATAGA
TAAATGTACTAATACTGATTTTACAGGGGTTTTTAATATTATCCTGAGAG
GCAGATTCACATTTATAACTTGAATAATTAAGAAAATATTTTAAAATAGC
CTGAAAGTAGTGAAGGATATTTGAAATATTTTCAATTGAAAAGGGGGCTA
TTAATTTCAAAATTTTACCAGAAAAACCGTGTTTTTCCTTGTTTGACTTT
ATTTGGTTTCTTATCCCTAAAATATTGTTGGTTTGATTAATCATGATTTA
TATTTTTAAGGCAGGGTCACCTGGCCAGAGAAAAGAACAACTTGGTTTTT
TCTCCCTTAAGATGTATGCATTTTAAATTGAGGATTGTGCAAGGGCCCGA
AGGGCCCGTAGTGCAATCCAGATTTTATAAGATAAAATCGAAGCCAAAGA
TAAATACTGGAAATCCGCTATGACTCGCAAGAAATAAATGAAATCGCTCA
AATAAATGAAATTTATGAAAATGAATTAGAAGTTAGGCCTACGGCTTCGA
TCCTATCACATCATCGACCCCATAACAAAATAATAATACAGAAATAGAGC
TTTCGAGCACAAAACAATCTGTGGTTATAGTGTTAGGGAGGGCTTGGTGG
GCAGTATTTATCTTTGGCTTCGATTTTATCTTATAAAATCTGGATTGCAC
TACAGGCCCTTCGGGCCCTTGCACAATCCTCAATTTTATGACGATAAAAT
CTCCGCCAGATAAATACTGGAAATCCGCTATGACTTTTAAGAAATAAAAG
CCATAGCTCAAACCCACATCGACCTCTCTTCAAAGCCCAAGGTAGAATAA
CCATCTTGTTCCACACAAAATTGACACGCACGACACTTTTTAAGTTGACC
CGATAACTCCTCCTACCTGAGACCTCAAATACTTATTTACAATAATAATG
ACCTTGTTGCCGAAACTCCCATACTAATTGTTCAAGTGACTCCCTTCGGG
CACTTCAATTCGACTTAATATTTGCAAAGAAAAACAAATTTGTAGCCTTT
AAAGGTCAAAAGAAGTCTAGGGAACAGGGAACCAAGACAAGACTACAGGA
GAATAGGAAATTGTTTACTATGAATCCATCTGCCTGGACTTTGCAAAGTC
AGGGAAGATTCTACAGGCTGTTGCTATCAAACAACATGTCCTGTCATTGA
AGACGCAAGTATCATCGGAATTTTTCGAGTCCATATTAGTGGTAAGCTAC
AACGGCAAAATTTACTAACTCGATTAGAGTATCTAGTACAAATCAGTGGT
ATGCATCGCTAAGTACTATACCTGTATGTATACATACTACTAGGGCCTGT
CTTGTAACAATAATCATCTTTAACACAGAACTTACGAAGTACTTCAGATC
GGCGACGAGATCAGCCCAATGGAATGTTAGATGACGTCGAAATTATAGGC
CTTAGGTAATACCTGGATTCCAGCCAAATTTTTACAGGTGTTGGATCAGA
AGTTAGAAAGAAAACTTTTTCCAACCCAGAGACCCTCTAACTAGAGTTAG
CTATCAAGGACTGTCCTTTATCAATCTATCTAGCAACAATCGAGGGACAG
GACAGGACTCCCATTATAAGATAAGAAATCTCAAAGTAAGAAAGAAATGA
AATGCATATATTATTTCTGGAAAAAAATGTTTCTTCAGAAAAAAAATACA
TATTTTGAATATGAAACATTCAAAAACTTTAATGAATCACTAAAGATAAA
TCCACGTTATGGAAACAAGAATAGCCGTCCAATATTATTGGTTGAAGCCT
CAATGTTGCATACATAGAGTTTAGTCTTTATCATGTTAATTAGTCGCAAC
TCAAAGTGTACCAAATAAATGACAGTTACGTTGGTTGCAATGCATTATCA
ACAGACTGAAAATGTTCATAAAAGTCATGTAACACTCATTTTGGAGAAAA
TCTACTTTCAGGGTCCATATATGAACTCTCCTATCCATCAGTGAGAGACA
TAAAATTGAATCATATAAACAAATTTGTATTCAACCATACAGGAGGTACG
GGATATGACTTTAAGGTTTTAACCTGAAATCCTTTAACGATCCATTTACT
AAACAGGAATGTAGCAACAGTTCTGAAGCAAGCTATTCTCGTGAACATTA
CAACACTACTCAGTGATTGGTGGCAGCTAAGTGTTCGACCCACTCAATTA
TCTGGGTTTAGAGCTAATATAGTATTTTGTCTGTCTAGTGCATCTGCTTT
GTTCTTCCATTGTTCCCGTCAAAGTTAATATTATGGATATTTCTTTCAGC
TATAATGGTTGGTATAAGGTATCCTCTTCACCTACAAATAATCAAAGAAG
CTTTATGTCAGTACATCTAATCACATGACTGAATAAAACTCAGTGATTCT
CATCTATTGATGTTGATGTATTGATGTTGATAGTAAACAATCCACCTATC
CCATGGATATGTATGTGTGAAAAATAAAGCTTCAAGCCGCATCTTGAGAT
ATAATAAAGAATCCTCAGTCTATTGAAGGTGCAAACATAAATTCATACGA
TAAACTGTGAAACTTACAACATTCTGTTAGTTGGAAGATCGTTATCAAAC
ACTGGTATCATCAGAAGCAGTATTCACTGGGCCTTAGAATGCCTAGAAAA
AATATGTGAAATAAAACATTAAAATCAAAAGTTAATGTTGGTAACCTTGC
CAAAAAATATGGAAGGGAAAGAATCTTTTTTGTGTATTAAGTTCAAATCA
TCTGCAATGGCAGACAATTGAAGGGTAATTTAAATGAATGTTGATATCAC
CCCCATGCAATGAGAAAGATAATTATTTGACATCGACAGAAGCAATAAAT
GTCAAATAACGTCAACCGAAGGAGAAAGAAATCCTTGAATAAATACTGAG
TATTGCAAATAGTATTTCTCGACTCAATTCTTATCAAGAAAGGAAGAGGT
AATTTTAAACAAATCTACCGGGCCATAGGTAACCCAAATTTTTAAGGATT
TGGACAGAAACTGCAGTAAACAGATATCTACAGTGCCAGATTAACACTTA
AGGATGGTATTTAAACCATATCATATGTGAAGAAAATTTCACTTTGTTGA
AAAGATTTTTGTATTAAATCCGGTCCCTCTATATTTTGTAACAGAAAAGG
ATTGTATCAGTAAATTTTTACACCCCATCTTGTGTTTCACCAACAATTTG
ATATGGAAGAAAATTAATTTTAATTTATATAAAAAGAAATTCAAGATTGG
GAATTTTTATGTAAAATCTCAGTCAGGTAATTACTGCAAGATCTTCAACT
TAATTCAACTAATATAGAAATTTTTTATTGTATTGTTCCTCTCTGTCACA
TATTGACAGCAAGGTAAAGAAATTCAACTAGTTTGACATTTTACTGTATA
ATCCTCATCATGTAATGACAGCGAGGCTCCTTATAATGATACAAATGGTA
CAAGACATTCAACTACAACTGTAATTTGAAATATTGTACTGCAACGGCCC
TCCCTCTCTGTCATATTGACATCAGGGTCTTTATCATGATAATATAAATT
AAACTTATACAGTACTGGATATTCTTGATTTGTTCCTCCCTCACTCAATG
ACAACAAAGGTCCTTCATAATGGTAAAATAAATTCAACTCTCAGAAAACA
GAATCGTATCAGCTCTCTCTGTCACTTAACGACAGAAGTTTATCTATAAT
GATGAAGAGTTTAAACTATGAACTGATCAAAAGTACTACTCAATATTCCT
CTCTCTGTCATGTAATGGCAACAAGGTTTTTATAAGTAGTAAAATGAAAA
CCACTAGTCTGAAATGCTATTGTATCAGTCCTTTATGATTATATACTACT
ATAAAGAATCTCTCTGTCACATAATGGCAGCAAGGTTCTTTATGATTATA
TACTGTATAGAATCTCTCCGTCCTGTAATGACAGCAAAGTTCTTTATGAT
TATATACTACTATATAGAATCTTCTGTCATGTAATGACAGCAAAGTTCTT
TATGATTATATACTACTATATAGAATCTTCTGTCATGTAATGACAGCAAA
GTTCTTTATGATTATATACTATATAGAATCTCTCTGTCACGTAATGCTAA
TGGCAGCAAAGTTCTTTATGATGATATATTATATAGAATCTTCGTCACAT
AATGACAGCAAAGTTCTTTATGATGATATATTATATAGAATCTCTCTGTC
ACGTAATGGCAGCAAAATTCTTTATGAATATATATACAATATGGAATCTC
CCTGTCACGTAATGACAACAAAGTTCTTTATGATTATATACTATATAGAA
TCTCTCTGTCACGTAATGCTAATGGCAGCAAAGTTCTTTATGATGATATA
CTACATAGAATCTTCGTCACATAATGACAGCAAAGTTCTTTATGATGATA
TGATATATAAATATAGAATCTTTCTGTCACGTAATGGCAGCAAAGTTCTT
TATGAATATATATACAATATAGAATCTCCCTGTCACGTAATGGCAGCAAA
GTTCTTTATGAATATATATACAATATAGAATCTCCCTGTCACGTAATGAC
AACAAAGTTCTTTATGATTATATACTATATAGAATCTCTCTGTCATGTAA
TGACAGCAAAGTTCTTTATGATGATATACTATATAATATAACGAATTCCA
CTAAATGGAAATACTATTGTATCAGCCCTCTCTCTGTCACATAAATGACA
GCAAGGTGTATCAGCCCCTCTCTGTCCCGTAATGGACAGAAAGTTTCTTG
TAAAGCCTGTCTTGTGGTAACCTAAGACTCTTCATGCTAATGTTGTCCTA
ACCCCATCTACAAACTAGGTGAAGGGTGATTTACGACCACAATTAGTGCT
AACTAAACCAATTTTTGAAACAAACAAATATTGCTTGGAGTTATGTTGCT
CTATCTAGTATCCACCGAAATATGGAACATTAATAAGCATTTAATCCCCT
ATCGAGTAACGATAGAAAGAAAAGTCATTAAGCTCACTACTTCAAATAGT
ATGATTCATACGATAAATCTAGATTAAAAAACATAAACATTATTACTTAC
ATTTGTTAGACATCTTGTTTTTTATTGCGAGAAAGCGAAATGAGGTCGAT
GTGGGTTTGAGCTATGGCTTTTATTTCTTAAAAGTCATAGCGGATTTCCA
GTATTTATCTGGCGGAGATTTTATCGTCATAAAATGAAAATTGTAATAGC
AAACCAACATAAGTGTCTTTTAAAGATCAATTTCACAGCCTTTCGGTTGT
GTTACATTTGGTCACTTTTGTATTGTTTGTAGAGTTGAAAGCTTTGGTTG
ATTTACATCAACGCGCTGATACATTAGAGGATGAGGAACCTTTAACCATT
GATGAAGCTCTCATTATACAGGTACAATATTTTTCAAACTACTTTGTACT
TACATAATTAGTAGCAAAAAACAATATATAATATCACTATACATCCATAG
TGAATGAAATCGTATATAAAATGAACGTTGATAGACTGAAATTTCATTTT
TCTAAAGCAAGATAATCTCTTGAGTCTCAAAGTCCATTTACATCACATTC
ACAAGTTGCAATATACTTTCAGAATATATATCTTCTTTTCCAAAAAATTT
TTCTAGTTTGGTCATCATACATTTAAATTGTTGGTATCCTAACTGTTGGA
AATGACTTCTTTGTAACAAAGTTGTACAATATATAAGTTTTTACCCTTTT
TAATCATTTTTAGGGTGCATTGGATTTGAAGAACAAGACAGCAAAAGATG
CATTGATACCTTTAGAAAATGTGGTCATGCTAAATGTTGATGACGTTCTT
GATGAAAATACTATGGACTTGGTAACTCCATTCATAGTTTGAACCTCTTT
TAGTTTATTTACTGTCCTAAAATTTCAAGAGCGAGCTTAAGCAAAGAGTA
CGGGAGTGCTCTGGAACGGCGTTGTTATGGTAACAACGCTTCCGCTCGCT
CTCTCATGCGGGGATTCCCTGGATATTTTGCCGTCAACGATGATTCGAGA
ACTTCAAAACAGCAAAATCACGTACTAGAGAAGACACCAAATTCTTGTTG
AAAATTTGTTAAAAAATCTGTTGAAAATCTCTAAAAATCCTGCAAAATGT
CAGTTAAAAGGTAAGTTTTATGAAGCTTTACTACATAATCCTCTCTTTTA
CACATTGCTTTGTGTTTATTTTGCTTTTATTTCGAAAGTGGGCTATTTTT
TACACAGATTGAGGGATACACATGTTTGTTTTGAACTTTTCTTCTTAAAA
CTCAAAAAATCTTTACAATTTGGTGCAAATAAAGACTATAATACATCTAT
AATCGACTTTTGATCAGTCTGCCTTTGATCTGGGGAGGGTTTTATAAGAT
TCAGTAGGTTTTGAATTTGTTTACACACAGTTTCTTGATTTTCCAAATGA
AAAATAAATTTTTCTCTTTTTCTCTTACAGTTCACCACTGATTTGGACTA
ACGAGAAGGAAATCATGTTATTGAGAGAAGTTCTTGTATCGCAACCCCAT
CAATTCAAAGAAAAGACCCCTAAACGAGGGGAAAAGTGGCAGCAAATTGC
AGACAACTTAAACAAATCAGACCAATTTAATAACAAAGCATCAACCAGAG
CAGTTCGTGAGAAGACCAATGCACTCATTCACGCTTTCCGTCAAACTCAA
CGTGCTGAACTTGCTGCCACAGGTATCAGCCCTGACCCTACAGAAAAAGA
AGTCCTATGCGAAGAGATTTGTCTTCAAATTGATGAATTTACTCGAATTC
TCGCTGAAAGCGGAAAAGCTGCAAAAGATGTCGAGAAAGACAAGTTACTT
GGAGAAGACATTCGTCAGAAGGCTATGGAATCTCAGAGCCAGACCCTCAA
ACGAAAAAGTGAGTCATCAGACGAGGAGGTCAAAAAGAGAAGATCATCAG
GGAGTGATGCTGTCTGTTTCTTAAGAGAGAAATCTGAAGCTGATGTAAAA
ATGCGAGAAAAAGAACTTGAGGTACAAACCCAAAGACTTCAATTAGAAGC
TACTAAAATTCAAAACGATCAAAATAATTTTATTAACATGTTTGCACTGA
TGTCAAATCAGATGCAACAGAATCAACAGATGACACTCAACATCATCGAA
AGACTTACAAATTCAGATAAAGGTGAGAATGGCCAATGAACTTGACTTAA
CTGGACTCGAAAATGTTGATTTTGTTTACAATCGTTGACATTTTTGTTGG
GAAAAACTCACGAAATATGAAAGACTTCTGATTATTTTGATTTTGTTTAC
AATCGTT

Coding sequence (CDS) from alignment at sc0000082_pilon:639759..648565-

>MSTRG.11382.3.p2 ID=MSTRG.11382.3.p2|Name=MSTRG.11382.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1446bp|location=Sequence derived from alignment at sc0000082_pilon:639759..648565- (Clytia hemisphaerica_ch_hm2_pilon)
TTCACCACTGATTTGGACTAACGAGAAGGAAATCATGTTATTGAGAGAAG
TTCTTGTATCGCAACCCCATCAATTCAAAGAAAAGACCCCTAAACGAGGG
GAAAAGTGGCAGCAAATTGCAGACAACTTAAACAAATCAGACCAATTTAA
TAACAAAGCATCAACCAGAGCAGTTCGTGAGAAGACCAATGCACTCATTC
ACGCTTTCCGTCAAACTCAACGTGCTGAACTTGCTGCCACAGGTATCAGC
CCTGACCCTACAGAAAAAGAAGTCCTATGCGAAGAGATTTGTCTTCAAAT
TGATGAATTTACTCGAATTCTCGCTGAAAGCGGAAAAGCTGCAAAAGATG
TCGAGAAAGACAAGTTACTTGGAGAAGACATTCGTCAGAAGGCTATGGAA
TCTCAGAGCCAGACCCTCAAACGAAAAAGTGAGTCATCAGACGAGGAGGT
CAAAAAGAGAAGATCATCAGGGAGTGATGCTGTCTGTTTCTTAAGAGAGA
AATCTGAAGCTGATGTAAAAATGCGAGAAAAAGAACTTGAGGTACAAACC
CAAAGACTTCAATTAGAAGCTACTAAAATTCAAAACGATCAAAATAATTT
TATTAACATGTTTGCACTGATGTCAAATCAGATGCAACAGAATCAACAGA
TGACACTCAACATCATCGAAAGACTTACAAATTCAGATAAAGGTGAGAAT
GGCCAATGAATGTCAGTTAAAAGTTCACCACTGATTTGGACTAACGAGAA
GGAAATCATGTTATTGAGAGAAGTTCTTGTATCGCAACCCCATCAATTCA
AAGAAAAGACCCCTAAACGAGGGGAAAAGTGGCAGCAAATTGCAGACAAC
TTAAACAAATCAGACCAATTTAATAACAAAGCATCAACCAGAGCAGTTCG
TGAGAAGACCAATGCACTCATTCACGCTTTCCGTCAAACTCAACGTGCTG
AACTTGCTGCCACAGGTATCAGCCCTGACCCTACAGAAAAAGAAGTCCTA
TGCGAAGAGATTTGTCTTCAAATTGATGAATTTACTCGAATTCTCGCTGA
AAGCGGAAAAGCTGCAAAAGATGTCGAGAAAGACAAGTTACTTGGAGAAG
ACATTCGTCAGAAGGCTATGGAATCTCAGAGCCAGACCCTCAAACGAAAA
AGTGAGTCATCAGACGAGGAGGTCAAAAAGAGAAGATCATCAGGGAGTGA
TGCTGTCTGTTTCTTAAGAGAGAAATCTGAAGCTGATGTAAAAATGCGAG
AAAAAGAACTTGAGGTACAAACCCAAAGACTTCAATTAGAAGCTACTAAA
ATTCAAAACGATCAAAATAATTTTATTAACATGTTTGCACTGATGTCAAA
TCAGATGCAACAGAATCAACAGATGACACTCAACATCATCGAAAGACTTA
CAAATTCAGATAAAGGTGAGAATGGCCAATGAATGTCAGTTAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11382MSTRG.11382Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11382.3.p2.exon7MSTRG.11382.3.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon6MSTRG.11382.3.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon5MSTRG.11382.3.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon4MSTRG.11382.3.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon3MSTRG.11382.3.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon2MSTRG.11382.3.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11382.3.p2.exon1MSTRG.11382.3.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11382.3.p2MSTRG.11382.3.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082_pilongenomesc0000082_pilon:639759..648565 -