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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:505601..508886- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11375.1.p1 ID=MSTRG.11375.1.p1|Name=MSTRG.11375.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3286bp|location=Sequence derived from alignment at sc0000082_pilon:505601..508886- (Clytia hemisphaerica_ch_hm2_pilon)
GCCATTTTATCAATTCATACGCTATATATTTGGAATTCCGGCTATTTTGA
TTAGCCAGACTTTTTATTGGGTTGTTTTCATACACATTAGTATTAAGGTT
TTTTACCTTAGATGTTTTCTTGCATTTTTTCTGTACTTTAAGCCTGATTT
AAATCCTTTGTGTCAAATATTCAATTTTTATTGGATTGACATAGTACGAG
CGATTGCTTTCATTTAACGAAACCTTGACACTAATCTACTTCCATTTTAA
TTGAATTTTCAGAATCTAGAATAGAGAAAAAAAAGACAAAAAAATTCTGT
TATAAAACATCAAACAAACGACTCAAGAATCTTATCACAAACATTCGCGA
GCTCTCTGGAAGGAGCAGTGATGCTGCCTAACGTTATCAAACTTACCTTT
GCCCTTACCTTCTTTTTGGTTGGCACGGGAGGCGCACGACAGCGTGAACG
ATGCGTACCGCTTATTAACGACCATTGTAAAGATCTTGGATACAACGCTA
CTTTGATTCCGAACGTTAAAGCTGGGATTGATAAACTGGATGAAGCTGCT
AGGAGAATCAGTGAATTTTCACCGTTATTTCAAGTGAATTGTTACGAAAA
TTTCAAGTTTTTTATTTGCAACATGTTTCTACCGGTTTGTCATTCGATTA
ATGGAAACCCGACCCCCGTCTATCCATGTCGACATGTTTGTGAGGAGGCG
AGAAAAGGTTGTGAACCTCTGATGAAGAAATATAGTTTCACATGGCCCGA
TGTTTTGAATTGCGAATTCCTGGCTAGTAACACGAAACAAAACGCCCTAT
GTGGTAGCCCACCGCCTTCCAAGCCCACCCGCAAAACGCCACAAACTGAA
GTTGTACCCACTGCCCCACCAGCATGGGTCAAAGTGGTTGAACAATTTCC
AAAAGGTATAGACGTTAAAGTGTTACAAAGTAAAGAGAATCTAGCCTTGA
TCAGCACTTTATTCAAAACCGATCGAGTGACTTTTAAATCGGTTTGTAAG
TTACTACCTAACTCGATTTATTTGAAAAAAACTGAGAGTGAAACCTGTGT
ATCAAAGTGCGAGGCAACTTCGCCATTCACAAAAGAGAACAAGAAATTCG
CTTCAGTATGGGTGTCAACTTGGTCCATCATTTGTTTCCTATCAACTCTG
GTCACTGTAACAACTTTCTTAGTCGATCACAAACGTTTCAAGTATCCTGA
ACGACCTATCATTTTCCTATCCTTCTGTTACAACTTATACTCGATTGGAT
ACCTCATCCGGGTTTTTGGCAACTACGAAAACATCGTATGTGAGAACTCA
CCGCAAGGTCAACACGCTTTGATAGATGGGATGTCGTCTACATCGTGCGC
CATTGTTTTCTTCCTTCTCTATTTCTTTGGAATGGCATCTGCTTTGTGGT
GGGTTGTCTTATCAGTTACCTGGTTTCTAGCTGCCGCTCTCAAGTGGGGA
CACGAAGCGATCGAAAAATATTCGTCACTTTTCCACGCGGTCGCCTGGAC
TGTACCGACTATACAAACTATTATCGCGCTGGTGACTCGTAAAGTAGACA
CTGATATGTTGGCAGGTGTTTGTTATATAGGAGCAACCAACAGTGAGAAT
TTATTAATGTTTGTGGCGTTACCGTTGCTTATCTATTTACTCATCGGAAC
ACTTTTTCTCATCATGGGATTTGTGGCTTTGATCAAGATCCGGAAAGAAC
TGCAACGAGAACGTAACACGAACAAATTGGAACGTTTGATCATTCGAATC
GGCATTTTCTCCGTCCTCTACTCCGTACCCGCCTCAATCGTGGTCGGATG
TTTTATACACGAGTATAACCGATTGAAACGTACCGAGCAAGTGTCACAAG
ACATGTTATCTTGTCTTAAAGATCCAAATTGTGAAAAGGATTTGAAACCG
CGCACCGAGATTTTCTACTTACGTTATTTCATGTTGTTGGTTGTCGGTGT
AACAAGCGGTGTGTGGATTTGGACATCCAAGACATTCGATTCGTGGAAGA
ATTTCTACCGACGACGTTTTCCTGAGAAATCGAGTAAACAAGAAGAGGAA
AAGGAACGTCTTTATAAGAACTCTTTTGCACCAACCACTTCCAATCTCCA
ATCTGCCCATGCTCCGCCACGCAGAAGATCCTCAAACGAAGCCTTAAATC
AATACACGCCCGCCAGTACGGTTGCTTCACACCCCGCTATCGCCATCCAA
CCAGGAATGTACGCACAGCCTGCAACTAATTTCTTTTTTCCTATCCAGCA
ACATCCGGCCGTCATGCAAGCACACAATCTACCCGTATCACAAGCTAAAA
TTGTTGATTCAAGTTCGCGCGGTTTTACAGTCACACCTTCGTCAAATATG
ACATCAGATTATGAACATAACGAAGTATTTAATAATTATGAAAACAAACT
TATTCAAAATGGACATGATATGATGCATAGACAAGCAAACTATGCTCCAA
GTAGCTCTTCAGAGCATTATACTGCTAGTCTACCTCGTAATGGTCGACCA
TTGGACCCTCCGGCTTCGCCGAAAAGTATGTCCAGTCGTTCGCATTACTC
GAACGAAGCCAAAATGTGAAAATATTTAGGGTTAGTTTCATATTTCTATT
AGCTAACAAATTGTGTACAAATTATTTTGGTTGCCAGTGCTTTGAACGTC
ACTCTAAGACTTTTTTTAGACCTTATATAGTAGGAGCCCTGTTTTGTTTA
AAACGTTGCGAGAATTCTATCCTGCACAAAGATATATCATATTTTCGTGT
TAAGGGACATATCCATGATTTGTTATTTTAATTCTGTCTTTTGAGAACGA
AAATCTTAATTTAATTTGGATGTATCGAAAGGCGCCTTCAAAATCTTGAC
AAGCTTAAAAGTCAATCTCGAATTGATGATGAAGCACTTTTATAGAAAGA
TCTATTTTTTAAAGGAAAACCTACGAAGGTAGTTCTAGAAAATTGATGAC
ATCTTTTATGATGTACAAGAAAATATTTTTGTGCGCTTTTATTTTCATTG
TATTTATTATTGTTAAAAGAAAAATAAACCATGTTTTTAACCTGCTTCGC
TAAAATATTAAGAAAATATTAGTTATTTAGTAAAAAAATCAATAATTGTA
TGATTTTAAAATTTCAAACTAAAAACGAGATAAAAAAGGCACTTTAGATA
AATTTTAAGTGCTATTTTTACCCATATATTTTTACCTTCTTATTCTACTT
TTTGTTAATAATTTTTTTCATTTAGCTATTTGTATATTTTATTGTTTACC
AGCTGAAAGATAAATGAATTTTAATTTTTCAAAAAA Coding sequence (CDS) from alignment at sc0000082_pilon:505601..508886- >MSTRG.11375.1.p1 ID=MSTRG.11375.1.p1|Name=MSTRG.11375.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2199bp|location=Sequence derived from alignment at sc0000082_pilon:505601..508886- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCCTAACGTTATCAAACTTACCTTTGCCCTTACCTTCTTTTTGGT
TGGCACGGGAGGCGCACGACAGCGTGAACGATGCGTACCGCTTATTAACG
ACCATTGTAAAGATCTTGGATACAACGCTACTTTGATTCCGAACGTTAAA
GCTGGGATTGATAAACTGGATGAAGCTGCTAGGAGAATCAGTGAATTTTC
ACCGTTATTTCAAGTGAATTGTTACGAAAATTTCAAGTTTTTTATTTGCA
ACATGTTTCTACCGGTTTGTCATTCGATTAATGGAAACCCGACCCCCGTC
TATCCATGTCGACATGTTTGTGAGGAGGCGAGAAAAGGTTGTGAACCTCT
GATGAAGAAATATAGTTTCACATGGCCCGATGTTTTGAATTGCGAATTCC
TGGCTAGTAACACGAAACAAAACGCCCTATGTGGTAGCCCACCGCCTTCC
AAGCCCACCCGCAAAACGCCACAAACTGAAGTTGTACCCACTGCCCCACC
AGCATGGGTCAAAGTGGTTGAACAATTTCCAAAAGGTATAGACGTTAAAG
TGTTACAAAGTAAAGAGAATCTAGCCTTGATCAGCACTTTATTCAAAACC
GATCGAGTGACTTTTAAATCGGTTTGTAAGTTACTACCTAACTCGATTTA
TTTGAAAAAAACTGAGAGTGAAACCTGTGTATCAAAGTGCGAGGCAACTT
CGCCATTCACAAAAGAGAACAAGAAATTCGCTTCAGTATGGGTGTCAACT
TGGTCCATCATTTGTTTCCTATCAACTCTGGTCACTGTAACAACTTTCTT
AGTCGATCACAAACGTTTCAAGTATCCTGAACGACCTATCATTTTCCTAT
CCTTCTGTTACAACTTATACTCGATTGGATACCTCATCCGGGTTTTTGGC
AACTACGAAAACATCGTATGTGAGAACTCACCGCAAGGTCAACACGCTTT
GATAGATGGGATGTCGTCTACATCGTGCGCCATTGTTTTCTTCCTTCTCT
ATTTCTTTGGAATGGCATCTGCTTTGTGGTGGGTTGTCTTATCAGTTACC
TGGTTTCTAGCTGCCGCTCTCAAGTGGGGACACGAAGCGATCGAAAAATA
TTCGTCACTTTTCCACGCGGTCGCCTGGACTGTACCGACTATACAAACTA
TTATCGCGCTGGTGACTCGTAAAGTAGACACTGATATGTTGGCAGGTGTT
TGTTATATAGGAGCAACCAACAGTGAGAATTTATTAATGTTTGTGGCGTT
ACCGTTGCTTATCTATTTACTCATCGGAACACTTTTTCTCATCATGGGAT
TTGTGGCTTTGATCAAGATCCGGAAAGAACTGCAACGAGAACGTAACACG
AACAAATTGGAACGTTTGATCATTCGAATCGGCATTTTCTCCGTCCTCTA
CTCCGTACCCGCCTCAATCGTGGTCGGATGTTTTATACACGAGTATAACC
GATTGAAACGTACCGAGCAAGTGTCACAAGACATGTTATCTTGTCTTAAA
GATCCAAATTGTGAAAAGGATTTGAAACCGCGCACCGAGATTTTCTACTT
ACGTTATTTCATGTTGTTGGTTGTCGGTGTAACAAGCGGTGTGTGGATTT
GGACATCCAAGACATTCGATTCGTGGAAGAATTTCTACCGACGACGTTTT
CCTGAGAAATCGAGTAAACAAGAAGAGGAAAAGGAACGTCTTTATAAGAA
CTCTTTTGCACCAACCACTTCCAATCTCCAATCTGCCCATGCTCCGCCAC
GCAGAAGATCCTCAAACGAAGCCTTAAATCAATACACGCCCGCCAGTACG
GTTGCTTCACACCCCGCTATCGCCATCCAACCAGGAATGTACGCACAGCC
TGCAACTAATTTCTTTTTTCCTATCCAGCAACATCCGGCCGTCATGCAAG
CACACAATCTACCCGTATCACAAGCTAAAATTGTTGATTCAAGTTCGCGC
GGTTTTACAGTCACACCTTCGTCAAATATGACATCAGATTATGAACATAA
CGAAGTATTTAATAATTATGAAAACAAACTTATTCAAAATGGACATGATA
TGATGCATAGACAAGCAAACTATGCTCCAAGTAGCTCTTCAGAGCATTAT
ACTGCTAGTCTACCTCGTAATGGTCGACCATTGGACCCTCCGGCTTCGCC
GAAAAGTATGTCCAGTCGTTCGCATTACTCGAACGAAGCCAAAATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:505601..508886 - |
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