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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:472069..477073+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11373.1.p1 ID=MSTRG.11373.1.p1|Name=MSTRG.11373.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5005bp|location=Sequence derived from alignment at sc0000082_pilon:472069..477073+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTAGCTAGATATTTCATTACGTTTATTTGGTGTAGAAATAAGTGAAC
ATAATTTTGGTTTGGTCTCAAAAACACACACctcaaagattttgtttgta
GCAGTTATAAACTGTAATTTTAGAGGTTGCAAAATGGAAAAGaatatcaa
ccaaacaaaaaacgACAGAACATATTGTTACCAACTCCCAGTTGCTATTG
GAAACTCGACTTTTTGTGGATTGAATAAAAACTGGGAATCTCGTTTTCGT
GATCACACTTTGCTCGCGATGACTATCATACCTATTGCAATTTATTGGAT
TGTTTTGTTTGCTTTCATCAAAACTTTGTATGAAACGCTGGTGAAATTTA
AAACATGGAGGACTGaagaaagtcaaaaatatttaacCGGAGGGAACAGG
AAGTATGAAATATTGGACAAAACTCGCtttaaaatgagtgaaaatgTTTT
CTGCCGTTCTCCATGTTGCATTCTTTATAAGTATCAACTTTTGAATGCAA
AGTTGTATGTTTCAATTGTTCTTATGGCactattcaaatatttttgggaT
GCAATTGATTTGACATTAGATCTTTACATTTTCTATCAACTGGAGAAAGG
AGAAGTTCTCGATCCTGTAATCTACCGAAACGCGAAGGTCAACAACTTGA
TATATGGTTTTGCCATTCTTGGAtgtatttgtaaagtttttactTGGAAA
TACTTTCAAACACTTACCCCTAATAACAGAAACAATAAATACTTTGAGAT
GAAATTTCTTCAGATGAAAAATATGGTCATGGTGGCAAGTTTTATGTTTG
AAGATGGCCCTGAGTTGATTTTGGAGTATTTCTACATTGAGAAATATATC
ACTTCATTTTCATTGCTTCTACTTGTAAAGGATACCTTTGTTGGTATTCT
TGCCATAATCACTTTCCTTACGACATTGGTTTATCTTTGTAAAGCTACAA
AATCTGTTCATTCAACAAATTGGTTTAGGAAAAACACAACTTCACACGTT
TTCTATTCAATGTTAGTTATGTCTTTtacattttcgaacgttttgagAGT
CGCTGGAGCTAGTTATCAGTATATCACCAAAAAGTTAAAGCGATCCTGTT
TTGTGATTGAAAATGGTGTTATCTTACAAACTCCCTTTACTTCTGGATGT
ATGCGTGGAATCGATTACGTCATTATTCTTATGGCAGGAATACCTTTGAT
CATTTTTGCTTACGCTTTATTGATGAACTTATTCATGAGTTGTCTTTGGT
TACATTCAGATGGAAAATTTGAAGAGAGCTCTTCAGAAGCTGCTCATATC
TTGAATAGACCATACTTCTTACAGCTGATCGATATTCACGGTGGACTAAT
GTTTAGTTTCTTTTGTCGCGCGGGGAAACAAATCTTAACATTTTTCGAGA
AACGATCGAAGATATTCAAACACCTGAATTGTAAAGAAGTGTGCAGGAAA
CGCTGGTATATGGCGTGTGTAACAACAGCGTGcaagaaacaaacagaaaa
gaaactttCGATCAATGTTACATATTTTAAAATACCCATTTCAACTTTAA
ATGATTTAAAGGGTGctcgtgtttgttttgaaagtgcaGTTTAGTGTTCA
AGTATAAACGTATATGTATACACGTATTATTATGTCCAGAAAAACAGTCG
AACTTCTACAAATATTATAAGCCGTCATTATTTcacataaaaaatttttt
catttgttcacCCCTTTGGTACAtgctttttcataagaatgtactcaata
agaatatccatgatgaaattagCCAAAAAGAGAATATCACTATCATGGTA
TTTAGTGATAAAACCTAAGAATGACATTCTCAGagcatttttaactgtaa
attaaCAACTGTCCCCCAGAAAGGCTCAAAATTTTgggatgaaattttct
gtaaattcctaacttttatttagcttcaaaataaaaaaaacttgacgccc
caaaattttcacaccttaagcatgatgacatttctgacagtaaggtgtca
caaaaattgccacatttccaatacaaatttatttttcatgtcaaatatat
cgtttttaaaccgtaatttGTTATTAAATATTTAGGATAATAGGCATTTT
AGACTCAgagaacttttttctaaagcctttgttcgaatacaatagctatt
caaaagaacagaggaaattttcagtttttgctcTCTTTGGGCAtaatgag
tgacgtcatcaaaacaattttttgtcaaaagttaccttaaaTGATAAGGG
TCTAATGTGctaaatttcatccaaaaagacgcACCAGATCAAAAAGTAAG
GGTGGTACagccccctagttttgaaccgcccctaaaagcctagtatgaat
agggttaaaataaaataaaattaagaaaattcatttttagttCTTGCTAA
ATACTTTAAAACTTTATGAGTCCTGGGAAGtacgaaacacgtgtctgcgg
atagatgtAATACTTTAATAATGAGATTTTATTCGAAGATAACTATTGTG
CGATCTTTTTTGATTCAAACTCCAATCTCTACAAAGataataatgatttt
ttgttttgattgctattagtttttaagtatgtgtgtaaacttatttcatt
tttcgcatttttCTTGATTGAGAAAGAAGTGTTTACCTGGCTTTAGAAAT
GGTAGTGTAAACGGTGTGAGATTGATAATGATGATACTTTCATGTGtata
aaattttttatatagaatacacgccttttttttaataagaatggtattta
aattctatgatggtgatattcttagcaaattcttatttttctagctAATA
acatcattaatatttttatgtaGTATATTTATATTAAAAGTGTCGAAAGT
TACAGCGTTATCCATCGGGTGGAGGGAGGTGGCCAGTagaagtaaaaaga
aaaacagtaaAACTACACTACTAGCTGCCTCCTAGAGGCTCTGTGTAGGC
GAGGCCAAATTGATTtcttgttttacgggccaagctacccaaataagagg
gtcggtcggtcggccaaaaaataagaataaaagtagaatttcacctataa
aatctcaTAAATAGgtagcaaaaactactacatcttgacaaaaatgcgga
atagaaaataaaaagacacaaaaatttcttcatggataaagtgaaaatcg
aacataaaattctgaaaaccttggaaaaactaccaaaatttcgaaaattt
ggcAATATGTAAAGCTAGCAAAAgctactacatcttgacaaaaatgcgga
atagaaaataaaaaggcaCAAAATTTTCTGGAGGGTCTCACTATATTTGG
CATAAGTAAAGAAAGATATTTGAAAGTCTAAAGCGAATGGATTTAATCAT
GATAGGTTAAGCAGACAGATTGCTGCCTTCCCTTATACATTTTCTATATA
TTTTACATACTTTTTACTTATAGTAAACATTATTTTGGTCTGATTGAAAA
AACATACATCTAGGATCAGTCTTAAATCTTATCCAAGTGTTAGTATTAAA
ATGGAAAAGAATATCAACCAAACAATAAACGACAGAACATATTGTCACCA
ACTCCCAATTGCTATTGGAAACTCGACTTTTTGTGGATTGAATAAAAACT
GGGAATCTCGTTTTCGTGATCACACTTTGCTCGCAATGACTATCATACCC
ATCGCAATTTATTGGATTGTTTTGTTTGCTTTCATCAAAACTGTGTATGA
AACGTTGGTGAAATTTAAAACATGGAGGActgaagaaaatctaaaatatt
taaCAGGAGGGTACAGGAGATATGAAATATTGGACAAAACTCACTTTGAA
ATGAGTGAAAATGTTTTCTGTGGTTTTCCATGTTGTATTCGTTACAAGTA
TCAACTTTTGAATGCAAAGTTATACGTTTCAATTGTTCTTATGGCACTAT
TCAGATATTTTTGGGATGCAATTGATTTGACATTAGATCTTTACATTTTC
TATCAACTGGAGAAAGGAGAAGTTCTCGATCCTGTAATCTACCGAAACGC
GAAGGTTAACAACTTGATATATGGTTTTGCCATTCTTGGATGTATTTGCA
AAGTATTTACTTGGAAATTTTTCCAAGTTATCACagaaaattacagaaat
tataAGTATtctgaaataaaatttcttcagaTGAAAAATATGGTCATGGT
GGCAAGTTTTATGTTTGAAGATGGCCCTGAGTTGATTTTGGAGTATTTTT
ACATTGAGAAGTATGTCACTTCATTTTCATTGCTTCTACTTGTAAAAGAT
ATCTTTGTTGGTATTCTTGCCATAATCACTTTCTTCACAACTTTGATTTA
CCTCATTAAGGACAGAAAAGCTGTCACTTTTGGACTTTGGTTCAGGACAA
TTACAATCTCACAAGTCTTCTATTCAATGTTAGTTATGTCCATTACATTT
TCGAATGCTTTGAGAGTCGGTGGAGCGTGCTATCAATATGTCACCAAAAA
GTTAAGGCGATCCTGTTTTATCGTGGGAAACGGTGTTATCTTACAAACTC
CTTTTACTTCTGGATGTATGCGTGGAATCGATTACGTCATTATTCTTATG
GCAGGAATACCATTGATGTTTTTCGCTTATGCTTTTTGGATGAACTTATT
CTTGAGTTGTCTTTGGCTACACTCGGACCGAAAATATAAAGGAAAGACTT
ATTTGAATCGACACATTTTAAATAGGTCTTTATTCCGACATATGATTGAT
ATTCATGGTGGTTTGATGTTTAGCTTCTTTTGTCGAGCCGGGAAACAAAC
ATTGACATTTTTAGGGAGCTTGAAGTGCTTGGATTGCAGAAAACCATGGA
AGAAGAACGCGGAAGAGAATATTATACACACTGTTTCATCTGTAAATTCA
ATCAATTTAAATGATGCTCGTATTTGCTATGAAAGTGCTGTTTGATGTCA
CGACTAAGTGttacaaattattttcgaaatttggatgaAAACAAATAGGA
AAGTAAAAGGTTTGTCATGCAAGGTTAAGGtttttttAGGCTGTATGCAT
CCcat Coding sequence (CDS) from alignment at sc0000082_pilon:472069..477073+ >MSTRG.11373.1.p1 ID=MSTRG.11373.1.p1|Name=MSTRG.11373.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000082_pilon:472069..477073+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAAGaatatcaaccaaacaaaaaacgACAGAACATATTGTTACCA
ACTCCCAGTTGCTATTGGAAACTCGACTTTTTGTGGATTGAATAAAAACT
GGGAATCTCGTTTTCGTGATCACACTTTGCTCGCGATGACTATCATACCT
ATTGCAATTTATTGGATTGTTTTGTTTGCTTTCATCAAAACTTTGTATGA
AACGCTGGTGAAATTTAAAACATGGAGGACTGaagaaagtcaaaaatatt
taacCGGAGGGAACAGGAAATATGAAATATTGGACAAAACTCACTTTGAA
ATGAGTGAAAATGTTTTCTGTGGTTTTCCATGTTGTATTCGTTACAAGTA
TCAACTTTTGAATGCAAAGTTATACGTTTCAATTGTTCTTATGGCACTAT
TCAGATATTTTTGGGATGCAATTGATTTGACATTAGATCTTTACATTTTC
TATCAACTGGAGAAAGGAGAAGTTCTCGATCCTGTAATCTACCGAAACGC
GAAGGTTAACAACTTGATATATGGTTTTGCCATTCTTGGATGTATTTGCA
AAGTATTTACTTGGAAATTTTTCCAAGTTATCACagaaaattacagaaat
tataAGTATtctgaaataaaatttcttcagaTGAAAAATATGGTCATGGT
GGCAAGTTTTATGTTTGAAGATGGCCCTGAGTTGATTTTGGAGTATTTTT
ACATTGAGAAGTATGTCACTTCATTTTCATTGCTTCTACTTGTAAAAGAT
ATCTTTGTTGGTATTCTTGCCATAATCACTTTCTTCACAACTTTGATTTA
CCTCATTAAGGACAGAAAAGCTGTCACTTTTGGACTTTGGTTCAGGACAA
TTACAATCTCACAAGTCTTCTATTCAATGTTAGTTATGTCCATTACATTT
TCGAATGCTTTGAGAGTCGGTGGAGCGTGCTATCAATATGTCACCAAAAA
GTTAAGGCGATCCTGTTTTATCGTGGGAAACGGTGTTATCTTACAAACTC
CTTTTACTTCTGGATGTATGCGTGGAATCGATTACGTCATTATTCTTATG
GCAGGAATACCATTGATGTTTTTCGCTTATGCTTTTTGGATGAACTTATT
CTTGAGTTGTCTTTGGCTACACTCGGACCGAAAATATAAAGGAAAGACTT
ATTTGAATCGACACATTTTAAATAGGTCTTTATTCCGACATATGATTGAT
ATTCATGGTGGTTTGATGTTTAGCTTCTTTTGTCGAGCCGGGAAACAAAC
ATTGACATTTTTAGGGAGCTTGAAGTGCTTGGATTGCAGAAAACCATGGA
AGAAGAACGCGGAAGAGAATATTATACACACTGTTTCATCTGTAAATTCA
ATCAATTTAAATGATGCTCGTATTTGCTATGAAAGTGCTGTTTGAATGGA
AAAGaatatcaaccaaacaaaaaacgACAGAACATATTGTTACCAACTCC
CAGTTGCTATTGGAAACTCGACTTTTTGTGGATTGAATAAAAACTGGGAA
TCTCGTTTTCGTGATCACACTTTGCTCGCGATGACTATCATACCTATTGC
AATTTATTGGATTGTTTTGTTTGCTTTCATCAAAACTTTGTATGAAACGC
TGGTGAAATTTAAAACATGGAGGACTGaagaaagtcaaaaatatttaacC
GGAGGGAACAGGAAATATGAAATATTGGACAAAACTCACTTTGAAATGAG
TGAAAATGTTTTCTGTGGTTTTCCATGTTGTATTCGTTACAAGTATCAAC
TTTTGAATGCAAAGTTATACGTTTCAATTGTTCTTATGGCACTATTCAGA
TATTTTTGGGATGCAATTGATTTGACATTAGATCTTTACATTTTCTATCA
ACTGGAGAAAGGAGAAGTTCTCGATCCTGTAATCTACCGAAACGCGAAGG
TTAACAACTTGATATATGGTTTTGCCATTCTTGGATGTATTTGCAAAGTA
TTTACTTGGAAATTTTTCCAAGTTATCACagaaaattacagaaattataA
GTATtctgaaataaaatttcttcagaTGAAAAATATGGTCATGGTGGCAA
GTTTTATGTTTGAAGATGGCCCTGAGTTGATTTTGGAGTATTTTTACATT
GAGAAGTATGTCACTTCATTTTCATTGCTTCTACTTGTAAAAGATATCTT
TGTTGGTATTCTTGCCATAATCACTTTCTTCACAACTTTGATTTACCTCA
TTAAGGACAGAAAAGCTGTCACTTTTGGACTTTGGTTCAGGACAATTACA
ATCTCACAAGTCTTCTATTCAATGTTAGTTATGTCCATTACATTTTCGAA
TGCTTTGAGAGTCGGTGGAGCGTGCTATCAATATGTCACCAAAAAGTTAA
GGCGATCCTGTTTTATCGTGGGAAACGGTGTTATCTTACAAACTCCTTTT
ACTTCTGGATGTATGCGTGGAATCGATTACGTCATTATTCTTATGGCAGG
AATACCATTGATGTTTTTCGCTTATGCTTTTTGGATGAACTTATTCTTGA
GTTGTCTTTGGCTACACTCGGACCGAAAATATAAAGGAAAGACTTATTTG
AATCGACACATTTTAAATAGGTCTTTATTCCGACATATGATTGATATTCA
TGGTGGTTTGATGTTTAGCTTCTTTTGTCGAGCCGGGAAACAAACATTGA
CATTTTTAGGGAGCTTGAAGTGCTTGGATTGCAGAAAACCATGGAAGAAG
AACGCGGAAGAGAATATTATACACACTGTTTCATCTGTAAATTCAATCAA
TTTAAATGATGCTCGTATTTGCTATGAAAGTGCTGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:472069..477073 + |
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