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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:362467..367169+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11366.2.p1 ID=MSTRG.11366.2.p1|Name=MSTRG.11366.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4703bp|location=Sequence derived from alignment at sc0000082_pilon:362467..367169+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGctctaacaaaaaataatatacctaaaaaaaaaactaaaaaaaaca
tgaGTAATGGTCAAGTGATTACTGaactttttgaacaaattgtTCACTCT
GAAGAAAGaatcaaacaaagatttgaaGATCTGAAGAAAGGTATGTGTTC
TCTTTTGTTTTATTCGCATTTCTAGTTTAGATGACTGTCAACTTTCttcc
ctgcctattctaattgccAGAGTAGGCAAAAAGTTGGCAGTTGAAGTCgt
tctaaaaaaattgaaagaagtcaAAACTCACTGCTTAAGTTCCCCTTAAA
GACACCCTCTAAATTTAGAAGTCAGAAACTATGACTTTCATCATCAACGA
cctgtatatttttttattttagttaatCAAGAAATCCAAAACCACCAAGC
TAAAATCAAATCCATCAAATATCAGAAAGATTCATTGCTTGGTAAATTGA
ACAACATGCGCCACAAATTGCTGGAAGAACAGTTAGAGGAGAAATGGATG
AACATTCGAAAAGATATTTTATTCACACAGAAAGAGAAATGTTTTAATGA
GAAACACGAACTGGTATTTGAGCTAGTAAGTTAAGTTTGGTTTAGGGAGA
CGTTTGGCATTTTTCTTTGCTATATTATCTTATAGTTCGTTTTTCTCAAT
CACGGAAGGATCAAGGTAAGGCAACATTTTTGCGGCTCGAGCTGAAAATA
AGCACATTctctgtcaaaaataaaatatgattttCCAAATTAAACTCTTT
CATTGAATTGAACAATTATTAACCAAAGTTTGAGCTGAAAATCGACCATG
AAAGTGCTGTGCTTACAGTTTTGCAAGCCTGGGATTCTCATTTGAAAGAC
ACTTGGCCCGTACTGCAACATTATCTGCCTTGTAGGAAATGTTTAAGCTC
TTCACAGTCaactctctgttattcgaatctttctgtaattcgaattaaaa
TATTGGTGCCCTCAGCTGGAAATGGTTTGAAATAATGTCtcaattcgaat
ttttctctggTTCGAATAAagtttttggtcccttgaagatcgaattagag
aaagacaaCTGTATGTATCTCACTAATTTACAAGAAATCTCAATTCATAA
TTCATTCTCTCGTCTAGGAAGAAATACAGGACAGGCAAAAGACAGACAGG
TTTGTCACTTCGCTCAGTAGTTAGTCATGAAAGTATGAAATTATAGTTGA
TCGAAGGTTCCATAATTCTCATAGCTCTAGAAACTATCagaaaaagagat
ttttgattgattgattgattgattgattgattgattgattgattgattga
ttgattggtagttcgacttattgatagttcgatatattgatagttggatt
gattaatacttcgattgattgattctttgattcatcgattcattgattca
ttAATGAATAGTACGACTTATTGTTTGATTTAGTGATTATTCGATCAGGT
TAAATTAATGTGTCGATTGATTGTTCGATTATTCGATTTTAGTGCAAATT
TCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGATGTTTTAAGCGGC
AACGGAATCATAGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAA
TTTGAAAATCGAAGAAGACTCTCTGAAGaaaggttaaatttttttaattc
actAAAGTCTGTTTGGATACTTTTGAGGGATCTTGGAGTAAGTTAAGCAT
TAAGGTTTGGTTGCTTTGAGACGCTAAAGATAAAAATACTTAACATGAAA
GTCACATCGTAGCACcttaatttcattattttcgcgtggtttaattttgc
gaatcagccaaaaagtaaaaatggtCCTGACAACGTCAGTTTTTCTCACA
AACAGCAAATTACAGGGACCTGAACTTCAGTTTCGCGTGGACTTGTTTTG
CGAGTCAAAAATTTCATGCGATTTCACGAGTTTTATTTTCGTGAATAAAG
CAAGAATTCGAGAAACTGTGAAAATTCATCCGAGTTATTAAGTAGAATTT
TTAAGATGCATTTGAAAAACTACTTATTTTTACCCTCTTTTCTTTAATAC
TAGACATTTTCGAGTGtgaaaaactggaagaaaaaagaaatgagctcaaa
gatgatcatgaaaagctcaaacaagaaaTTGAAGAACtgatgaaaaacaa
agatggtaTAAACATAAATTGCATTCAATATTGTAGTTTTTCATTATTTG
GGATTTGCATAggtcatttcacagtcgcaaagcgtaatgggtaatcactG
CGCgataatgacgacttactattggtccaaagttttgaaaaatattcttg
cgtctagccaacgggaagccgttaTGGAGGCACAACctgtcctgattacc
catgatctattttgactgtgaaatggcctatactTCACGTAGGTTTACTA
ATGCCACCTCAGACTGGGCCTAAATCGGCTAGACTTGAGGTCGAGAAATT
AAGAGCTGTATATTGACCGAATATGTGccttaaaaatagaaatttaatgT
AAAACAGTGTCAAAGAGTTAGATATTTATCTCTCTTccaacgcccccccc
ccccccgggtttgcCGTGGACACAGTCCTTTTGACCTCTATATCTTTAtt
cagaatgcaaaaaaaaattgttgatcGCTCAGAGTGATTGTAAGAAGATG
AAAGATGTGAAGGAAGGTTTCCTCCGTAAGTTACAAAACAATACGAATCA
CAGAAGGTAAGATCAGTATACTTTTTTCATAGGGCACCATTACGTTTTGG
TTGATGCTTTTAATGCGAATTTCAAGCttaattgttcttaaaatattcct
aATATTCGTGATATGCACAATTTTTACATCACTTACAACcgatcagctat
tgggtccgtgatgtaatatcagaagacattgcaaagggcatatcatgaat
agctaCTTTGTTTATTGACTTAAAAGGGGCAGAATTAAGAACACATTAAG
GTATTTCTAAAACTGAGGCTTGGTTGTTagcttttggtcaaaattgattt
gataaatttttgcggccgaaaaaaaaaatcgaaacaaatTGTATTTCGGT
AATTAATTTTCGTGGTAATAAGTTTTCTCGGTTGGGGCtaaattttataa
tattttcgaATAAGTGATGTCAGAAAGgcttttgttaaaatttgacTCGA
TCATCttctgaaaaagtaaaattgcgAAATTAACTTTTGCGGTTTCGAGT
TCGTAAATATTTTCGCGGGTTCAGATTTTCAATGTATTGTAAGCCTCTTA
AAGCATAAATCTAAACCTAAGCGACTCCTATGAAATCGGAGTTGATTGGA
GGCGAATGGCCTTTGTACATCCCAGTTTTTGTCAGTACTggtaaatttta
aacaatttctcCTTagcttaaatttgccactacttgCAAAAACCGGGATG
ttttcgtagaaaacattacgtcatgaatatcatgaattgacaGATCTTTC
CAGAGACGCTACTGATTAAttattgaattctttttttgtcttttcaaaGT
CTACAAAACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGA
TGAGAAACATAATCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGA
ACATTAACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAGG
CCAAATACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTC
AGCATCATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAG
GGGCGTCACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGACG
TCAATGTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAG
AAACGATAGAAACAGTTTTGACTTTGATATTGATGTAAGTTTGTTCTGAT
TACGTTGTCTAGCAACGACTTTCATTTTTACGAATGTTGTAATTTTAAGT
AAAGTGAAACCCTAAGTCACGATCGTGTCGTTATTTGTTTGAGCTAATAC
AAAGATTTAGTTATCCACCTATCATTAAGGAAGGAAAGAGACtttttttA
TtctggcagtttcatgccactttggTGGCAATCTTCACCTATCATATTAT
CCACCTATCATAACTGGAATGACTGTTGGTCGATCTTTCTGTAGAGGTTT
TCCATGTTTTTGCAAGTTACGTAATtttcgccattatggaagcaatcGTT
CAAATCTGTGCGGTCCTTTACGCAagtcgaacgtttgcttccagaataac
aaaaattaaaacatgaaaattttttttatagttaTTCAAAGTTTTCAACC
AATGCTTTTGGAGAAACAACTTTCAAACTatgatttcattttgttttata
tattttcagttAAGTGATGATGATATGCTGATGACATCATatttgttaca
agaaaaatgatCACTTGGATTTTGGCGTGTGCCAGTAACCAGTAACAAGT
AGTAAGATTGTCCAAAGATGTATGTCAAGGAAGGACTTGCTGACAATCAT
CATGAGTAACTTTCCAAAACGGACCTTTTTATACTTGGAGTGATATATAA
TAGTTTTACTTGGCTTCCAAGAAAACTGTTCAACCAAAGCTAGGCAGTGT
TAATTACTATTTATCATATTTGTTGTTTGAAAATTGTTCATAATTATTTA
CCCTATTTATTGATGTTGCAATATTTTGTTCCGAATCAAAACTTAAATGA
TGt Coding sequence (CDS) from alignment at sc0000082_pilon:362467..367169+ >MSTRG.11366.2.p1 ID=MSTRG.11366.2.p1|Name=MSTRG.11366.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4860bp|location=Sequence derived from alignment at sc0000082_pilon:362467..367169+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAACACGAACTGGTATTTGAGCTATGCAAATTTCTTGGAAGCATG
TGATTGTTTCCTTGAAGACTTTGATGTTTTAAGCGGCAACGGAATCATAG
AGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTTGAAAATCGAA
GAAGACTCTCTGAAGaaagACATTTTCGAGTGtgaaaaactggaagaaaa
aagaaatgagctcaaagatgatcatgaaaagctcaaacaagaaaTTGAAG
AACtgatgaaaaacaaagatgaatgcaaaaaaaaattgttgatcGCTCAG
AGTGATTGTAAGAAGATGAAAGATGTGAAGGAAGGTTTCCTCCGTAAGTT
ACAAAACAATACGAATCACAGAAGTCTACAAAACGAATTGGACAGAAGCA
AGAAAAAGCTACAATATCTCACCGATGAGAAACATAATCTCGAGCGACAA
CTAGCTGATCAGCAACGTAAACGGAACATTAACAATGTGGAAACCAGACA
GTCAAACCCATGGTACATTTCAAGGCCAAATACAACACCTGGTTTCTCTC
ATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCATCTTCGACGCGT
CGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCAGCTAA
TGATGACGTCTTTTCTGATATGACGTCAATGTCACGTGATAGCTCTCAAA
ATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAGTTTTGACTTT
GATATTGATttAAGTGATGATGATATGCTGATGACATCATatttgttaca
agaaaaatgaATGAGAAACACGAACTGGTATTTGAGCTATGCAAATTTCT
TGGAAGCATGTGATTGTTTCCTTGAAGACTTTGATGTTTTAAGCGGCAAC
GGAATCATAGAGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTT
GAAAATCGAAGAAGACTCTCTGAAGaaagACATTTTCGAGTGtgaaaaac
tggaagaaaaaagaaatgagctcaaagatgatcatgaaaagctcaaacaa
gaaaTTGAAGAACtgatgaaaaacaaagatgaatgcaaaaaaaaattgtt
gatcGCTCAGAGTGATTGTAAGAAGATGAAAGATGTGAAGGAAGGTTTCC
TCCGTAAGTTACAAAACAATACGAATCACAGAAGTCTACAAAACGAATTG
GACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGAAACATAATCT
CGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATTAACAATGTGG
AAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAATACAACACCT
GGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCATC
TTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAA
GACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAATGTCACGTGAT
AGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAG
TTTTGACTTTGATATTGATttAAGTGATGATGATATGCTGATGACATCAT
atttgttacaagaaaaatgaATGAGAAACACGAACTGGTATTTGAGCTAT
GCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACTTTGATGTTTT
AAGCGGCAACGGAATCATAGAGAAGAAGCAGAGCATCTTACAACAGAGGC
TCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGaaagACATTTTCGAG
TGtgaaaaactggaagaaaaaagaaatgagctcaaagatgatcatgaaaa
gctcaaacaagaaaTTGAAGAACtgatgaaaaacaaagatgaatgcaaaa
aaaaattgttgatcGCTCAGAGTGATTGTAAGAAGATGAAAGATGTGAAG
GAAGGTTTCCTCCGTAAGTTACAAAACAATACGAATCACAGAAGTCTACA
AAACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTCACCGATGAGA
AACATAATCTCGAGCGACAACTAGCTGATCAGCAACGTAAACGGAACATT
AACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTTCAAGGCCAAA
TACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTTTCTTCAGCAT
CATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAACAAAGGGGCG
TCACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATATGACGTCAAT
GTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAACAACAGAAACG
ATAGAAACAGTTTTGACTTTGATATTGATttAAGTGATGATGATATGCTG
ATGACATCATatttgttacaagaaaaatgaATGAGAAACACGAACTGGTA
TTTGAGCTATGCAAATTTCTTGGAAGCATGTGATTGTTTCCTTGAAGACT
TTGATGTTTTAAGCGGCAACGGAATCATAGAGAAGAAGCAGAGCATCTTA
CAACAGAGGCTCTCTAATTTGAAAATCGAAGAAGACTCTCTGAAGaaagA
CATTTTCGAGTGtgaaaaactggaagaaaaaagaaatgagctcaaagatg
atcatgaaaagctcaaacaagaaaTTGAAGAACtgatgaaaaacaaagat
gaatgcaaaaaaaaattgttgatcGCTCAGAGTGATTGTAAGAAGATGAA
AGATGTGAAGGAAGGTTTCCTCCGTAAGTTACAAAACAATACGAATCACA
GAAGTCTACAAAACGAATTGGACAGAAGCAAGAAAAAGCTACAATATCTC
ACCGATGAGAAACATAATCTCGAGCGACAACTAGCTGATCAGCAACGTAA
ACGGAACATTAACAATGTGGAAACCAGACAGTCAAACCCATGGTACATTT
CAAGGCCAAATACAACACCTGGTTTCTCTCATCTAAATCACACGACGGTT
TCTTCAGCATCATCGTCATCTTCGACGCGTCGTTTTCAATATTCCGTCAA
CAAAGGGGCGTCACGCAAAAGACCAGCTAATGATGACGTCTTTTCTGATA
TGACGTCAATGTCACGTGATAGCTCTCAAAATTCGCAGTACTCGCAAAAC
AACAGAAACGATAGAAACAGTTTTGACTTTGATATTGATttAAGTGATGA
TGATATGCTGATGACATCATatttgttacaagaaaaatgaATGAGAAACA
CGAACTGGTATTTGAGCTATGCAAATTTCTTGGAAGCATGTGATTGTTTC
CTTGAAGACTTTGATGTTTTAAGCGGCAACGGAATCATAGAGAAGAAGCA
GAGCATCTTACAACAGAGGCTCTCTAATTTGAAAATCGAAGAAGACTCTC
TGAAGaaagACATTTTCGAGTGtgaaaaactggaagaaaaaagaaatgag
ctcaaagatgatcatgaaaagctcaaacaagaaaTTGAAGAACtgatgaa
aaacaaagatgaatgcaaaaaaaaattgttgatcGCTCAGAGTGATTGTA
AGAAGATGAAAGATGTGAAGGAAGGTTTCCTCCGTAAGTTACAAAACAAT
ACGAATCACAGAAGTCTACAAAACGAATTGGACAGAAGCAAGAAAAAGCT
ACAATATCTCACCGATGAGAAACATAATCTCGAGCGACAACTAGCTGATC
AGCAACGTAAACGGAACATTAACAATGTGGAAACCAGACAGTCAAACCCA
TGGTACATTTCAAGGCCAAATACAACACCTGGTTTCTCTCATCTAAATCA
CACGACGGTTTCTTCAGCATCATCGTCATCTTCGACGCGTCGTTTTCAAT
ATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCAGCTAATGATGACGTC
TTTTCTGATATGACGTCAATGTCACGTGATAGCTCTCAAAATTCGCAGTA
CTCGCAAAACAACAGAAACGATAGAAACAGTTTTGACTTTGATATTGATt
tAAGTGATGATGATATGCTGATGACATCATatttgttacaagaaaaatga
ATGAGAAACACGAACTGGTATTTGAGCTATGCAAATTTCTTGGAAGCATG
TGATTGTTTCCTTGAAGACTTTGATGTTTTAAGCGGCAACGGAATCATAG
AGAAGAAGCAGAGCATCTTACAACAGAGGCTCTCTAATTTGAAAATCGAA
GAAGACTCTCTGAAGaaagACATTTTCGAGTGtgaaaaactggaagaaaa
aagaaatgagctcaaagatgatcatgaaaagctcaaacaagaaaTTGAAG
AACtgatgaaaaacaaagatgaatgcaaaaaaaaattgttgatcGCTCAG
AGTGATTGTAAGAAGATGAAAGATGTGAAGGAAGGTTTCCTCCGTAAGTT
ACAAAACAATACGAATCACAGAAGTCTACAAAACGAATTGGACAGAAGCA
AGAAAAAGCTACAATATCTCACCGATGAGAAACATAATCTCGAGCGACAA
CTAGCTGATCAGCAACGTAAACGGAACATTAACAATGTGGAAACCAGACA
GTCAAACCCATGGTACATTTCAAGGCCAAATACAACACCTGGTTTCTCTC
ATCTAAATCACACGACGGTTTCTTCAGCATCATCGTCATCTTCGACGCGT
CGTTTTCAATATTCCGTCAACAAAGGGGCGTCACGCAAAAGACCAGCTAA
TGATGACGTCTTTTCTGATATGACGTCAATGTCACGTGATAGCTCTCAAA
ATTCGCAGTACTCGCAAAACAACAGAAACGATAGAAACAGTTTTGACTTT
GATATTGATttAAGTGATGATGATATGCTGATGACATCATatttgttaca
agaaaaatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:362467..367169 + |
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