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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:244953..247101+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11355.1.p1 ID=MSTRG.11355.1.p1|Name=MSTRG.11355.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2149bp|location=Sequence derived from alignment at sc0000082_pilon:244953..247101+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTGGTCAAAATCTACAACAGATTCGACTGATACTACAACCATGTCTCA
TAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAACCATGCCTC
ATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAACCATGCCT
CATAATTGGTCAAAATCTACAACAGATTCGACTGATACCACAACCATGTC
TCATAATTGGTCAAAATCTACAACTGATTCGACTGATACCACAACCATGC
CGCATAATTGGTCAAAATCTACAACAGATTCGACTGATACCACAACCATG
TCTCATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACTAACAT
ACCTCTTCGAACTACAATAAAGTCAACGGGCCCTACTAAACCTCAAGTAG
AAAAAGGTAAACTGTTAtgattgttatgttttcttaaagatataaaAACA
CATAAAGTCTTACCTTCAAGGCCAGATGATTTGTTCTCTACTATGAGAGG
TACCGTATTGGCTACTCACATTCTATATGTGATCTCTTAGTGTAATATGA
GAATGTAGCGTGTCAATCGTGTAATTGTCTTTGCTGACCATCCACTGAAC
CATGTAAAAACACTAAATTATAAACATTATTTTTAACAGGGATGTGCCAA
TGCGTGACTCCCAAGGAATGTCCTTACAAAGCTCTGTCATGGACTATGAA
AGATGTTACTAGCTTAAAAGGTAAATTTATTTTGGCAGTCATAACTGAGC
ACGTAACCACAAGCATGTTCGAGTTACGCAGTTCCATTTCAATATACATT
GGATGCTCTTAGCTCCTTCATTCTTCCCTTCTTGCTCAATGAAACACGGT
AATACCTTATTAAAGGAACGTTCTATTCCGTCGTATTTCTTATTCTTCTT
TTGTCGTTAAAGTTGTCTGCCGGCTGCCACAACGTTTAtcaatgttcaca
acgtccatatataacgttagatgaacggtgaaccaacgttgtgtgccaac
atGGCTTCCAAAGAATCCTTATTGTAATTAAAATTCGATGTTTTTTCCAG
GAAACTCGTTGGGAGAGAAAATACGTTTGGCTTTGAAACTGATTGATAAA
CAAATGGCGCATTTACGAGAGAAGATGAAATCGTTTGTTTCGTGTAAGac
aaatttgcaatttttcatcaAGACACACAATGGAGTAGAGCAACAAAAAT
CACTTAAGAATTACACTGACTGTCTCATGGCAATGCAGTGTAAACTGAGC
CCTTGGCTGAGGGCTTTGACCAATCGAAAACAGATGCTGGAAAGTGATCT
TACTCAATTGGAAAGTGGATGGGTCCCtcacatcaaaaaatgtaaGTTCG
TATAAAGGCCcgttcactttttttgattaaTGGGATTAGCTCTGGACTCG
TACTTTCCGAGAATATGTTTTGAAGATCGAAACCATATTTCAAGATAACT
ATCTTGAATTCTCCTGTctactttgaaaaagtaacgTTCGTCTCAATAAA
AGTTTTCAAAGGTCACTTTCTTTAATTGGTTTGCTAGAAAAGTTTCATAC
GGGGTAACAGATATATTGTCCTGGTAATTAAGCTGTCATGTCATTCAAAG
GGCCCAAATCTTATAGTTCATAGATTGATTAGATGCTTCTTTGGGGGGTA
ATACACGTGACAAGGTGTAATTCACTGGCGGATCCCCTAGGGGCGTATCA
TTatactcccccccccccgaaagAACGGAATCTTCGAACAGAGCATACCC
ATTGATAAATACTTAACATTAGAATTATTTTAATCACatgatttcaaaat
cttaaacttcatttaaatgaaaattttcattttcttcgttTAACAGCTTA
CGACTTGATCGCTCGATCGCGGACCGGGAAATGGTGATGAAGATGCCAGC
GATGTAAAAAATTATCCTCACCATCGCATCGCGGAAAAAATTTAAGGTGT
CGggaataaatgaataaaatttcgtatttaatggaattgtaattttaatt
tagtatttattaatcataatttaataatttattgatcgatttatttatta
atttatttatgttatttaatatgaaatatatcaaaatagtacaaaatttt
aatGATATATATTTAATTGGTGTTTAAAGGATTATCGGTTTCGGATTTC Coding sequence (CDS) from alignment at sc0000082_pilon:244953..247101+ >MSTRG.11355.1.p1 ID=MSTRG.11355.1.p1|Name=MSTRG.11355.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3276bp|location=Sequence derived from alignment at sc0000082_pilon:244953..247101+ (Clytia hemisphaerica_ch_hm2_pilon)
AATTGGTCAAAATCTACAACAGATTCGACTGATACTACAACCATGTCTCA
TAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAACCATGCCTC
ATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAACCATGCCT
CATAATTGGTCAAAATCTACAACAGATTCGACTGATACCACAACCATGTC
TCATAATTGGTCAAAATCTACAACTGATTCGACTGATACCACAACCATGC
CGCATAATTGGTCAAAATCTACAACAGATTCGACTGATACCACAACCATG
TCTCATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACTAACAT
ACCTCTTCGAACTACAATAAAGTCAACGGGCCCTACTAAACCTCAAGTAG
AAAAAGGGATGTGCCAATGCGTGACTCCCAAGGAATGTCCTTACAAAGCT
CTGTCATGGACTATGAAAGATGTTACTAGCTTAAAAGGAAACTCGTTGGG
AGAGAAAATACGTTTGGCTTTGAAACTGATTGATAAACAAATGGCGCATT
TACGAGAGAAGATGAAATCGTTTGTTTCGTGTAAGacaaatttgcaattt
ttcatcaAGACACACAATGGAGTAGAGCAACAAAAATCACTTAAGAATTA
CACTGACTGTCTCATGGCAATGCAGTGTAAACTGAGCCCTTGGCTGAGGG
CTTTGACCAATCGAAAACAGATGCTGGAAAGTGATCTTACTCAATTGGAA
AGTGGATGGGTCCCtcacatcaaaaaatCTTACGACTTGATCGCTCGATC
GCGGACCGGGAAATGGTGAAATTGGTCAAAATCTACAACAGATTCGACTG
ATACTACAACCATGTCTCATAATTGGTCAAAATCTACAACAGATTCGTCT
GATACCACAACCATGCCTCATAATTGGTCAAAATCTACAACAGATTCGTC
TGATACCACAACCATGCCTCATAATTGGTCAAAATCTACAACAGATTCGA
CTGATACCACAACCATGTCTCATAATTGGTCAAAATCTACAACTGATTCG
ACTGATACCACAACCATGCCGCATAATTGGTCAAAATCTACAACAGATTC
GACTGATACCACAACCATGTCTCATAATTGGTCAAAATCTACAACAGATT
CGTCTGATACCACTAACATACCTCTTCGAACTACAATAAAGTCAACGGGC
CCTACTAAACCTCAAGTAGAAAAAGGGATGTGCCAATGCGTGACTCCCAA
GGAATGTCCTTACAAAGCTCTGTCATGGACTATGAAAGATGTTACTAGCT
TAAAAGGAAACTCGTTGGGAGAGAAAATACGTTTGGCTTTGAAACTGATT
GATAAACAAATGGCGCATTTACGAGAGAAGATGAAATCGTTTGTTTCGTG
TAAGacaaatttgcaatttttcatcaAGACACACAATGGAGTAGAGCAAC
AAAAATCACTTAAGAATTACACTGACTGTCTCATGGCAATGCAGTGTAAA
CTGAGCCCTTGGCTGAGGGCTTTGACCAATCGAAAACAGATGCTGGAAAG
TGATCTTACTCAATTGGAAAGTGGATGGGTCCCtcacatcaaaaaatCTT
ACGACTTGATCGCTCGATCGCGGACCGGGAAATGGTGAAATTGGTCAAAA
TCTACAACAGATTCGACTGATACTACAACCATGTCTCATAATTGGTCAAA
ATCTACAACAGATTCGTCTGATACCACAACCATGCCTCATAATTGGTCAA
AATCTACAACAGATTCGTCTGATACCACAACCATGCCTCATAATTGGTCA
AAATCTACAACAGATTCGACTGATACCACAACCATGTCTCATAATTGGTC
AAAATCTACAACTGATTCGACTGATACCACAACCATGCCGCATAATTGGT
CAAAATCTACAACAGATTCGACTGATACCACAACCATGTCTCATAATTGG
TCAAAATCTACAACAGATTCGTCTGATACCACTAACATACCTCTTCGAAC
TACAATAAAGTCAACGGGCCCTACTAAACCTCAAGTAGAAAAAGGGATGT
GCCAATGCGTGACTCCCAAGGAATGTCCTTACAAAGCTCTGTCATGGACT
ATGAAAGATGTTACTAGCTTAAAAGGAAACTCGTTGGGAGAGAAAATACG
TTTGGCTTTGAAACTGATTGATAAACAAATGGCGCATTTACGAGAGAAGA
TGAAATCGTTTGTTTCGTGTAAGacaaatttgcaatttttcatcaAGACA
CACAATGGAGTAGAGCAACAAAAATCACTTAAGAATTACACTGACTGTCT
CATGGCAATGCAGTGTAAACTGAGCCCTTGGCTGAGGGCTTTGACCAATC
GAAAACAGATGCTGGAAAGTGATCTTACTCAATTGGAAAGTGGATGGGTC
CCtcacatcaaaaaatCTTACGACTTGATCGCTCGATCGCGGACCGGGAA
ATGGTGAAATTGGTCAAAATCTACAACAGATTCGACTGATACTACAACCA
TGTCTCATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAACC
ATGCCTCATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCACAAC
CATGCCTCATAATTGGTCAAAATCTACAACAGATTCGACTGATACCACAA
CCATGTCTCATAATTGGTCAAAATCTACAACTGATTCGACTGATACCACA
ACCATGCCGCATAATTGGTCAAAATCTACAACAGATTCGACTGATACCAC
AACCATGTCTCATAATTGGTCAAAATCTACAACAGATTCGTCTGATACCA
CTAACATACCTCTTCGAACTACAATAAAGTCAACGGGCCCTACTAAACCT
CAAGTAGAAAAAGGGATGTGCCAATGCGTGACTCCCAAGGAATGTCCTTA
CAAAGCTCTGTCATGGACTATGAAAGATGTTACTAGCTTAAAAGGAAACT
CGTTGGGAGAGAAAATACGTTTGGCTTTGAAACTGATTGATAAACAAATG
GCGCATTTACGAGAGAAGATGAAATCGTTTGTTTCGTGTAAGacaaattt
gcaatttttcatcaAGACACACAATGGAGTAGAGCAACAAAAATCACTTA
AGAATTACACTGACTGTCTCATGGCAATGCAGTGTAAACTGAGCCCTTGG
CTGAGGGCTTTGACCAATCGAAAACAGATGCTGGAAAGTGATCTTACTCA
ATTGGAAAGTGGATGGGTCCCtcacatcaaaaaatCTTACGACTTGATCG
CTCGATCGCGGACCGGGAAATGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:244953..247101 + |
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