MSTRG.1135.1.p1 (mRNA) -

Overview
NameMSTRG.1135.1.p1
Unique NameMSTRG.1135.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:2771134..2772691+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1135.1.p1 ID=MSTRG.1135.1.p1|Name=MSTRG.1135.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1558bp|location=Sequence derived from alignment at sc0000005_pilon:2771134..2772691+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAGAAACTGATACCATTAAATGTACCGGACAGTCTTTTTGAACGTCAGA
TGAACATAAAAAACGTTTGTGCCTGCTTGTGATAAAGAACACTAAATGtc
taattttttaattaattcatctttgttttcttgtttctttcttCCAGGAA
AAATGTATATAAAACAAAGAAGGTTTAGACGGACAAATTAGATTTAGTGA
CATTGTTTAACATAATTCCCCATTAAAGATTTATACACTTGGAACTTAGA
AAACGTcgttgtaaaaaaaaattgcaaatcacATTACCTATTCgataatt
attattttcaacacAAAGAGAAGAAATAATTACCAGTTAAATATTTAGGC
AATATAAATGAACAAAGACGCCGAAGTAAACCGTGTGGCGGCAACTGCCG
TTGCGGCCGCTATCGCTTCTGCCACTGCAGAACACATTGCAAAACAATCC
AACCCAACTATGGGTGCTAAAGCGGCCGCGCGTGCAGCAGAGGTGGCCGA
TGCGGTGGCAAAAGGCGATTCAGAACGTGCGTCGCAGGCTGTCATCGCAG
CTGCAAAAGCAGTCGAGGAAATTATCGCATTTTCTGTTAATCGACAATCG
ATATCTTCGTATAAAGCGGTTGGTGAggattcgatgacgtcattaaatgA
GAACAACTGCGGACGACGAACGAACGGCATGTCGAAGAAAAGTCGGATGT
GTATATTGCTGTAATATCATATTTTAGTGACGCGTCTTTTAGACGTATTT
TCACAACCTGGGTGAAAGATGTGTTGTATAAAAGTTAGAATCATGTTCTA
CGCGGATGTTAATCACTTTAGTGTCAGTTACAGTATTGCTTATTgatgaa
attatttgaaaatatataataagCACCATGTTTTAACATGTGTTTTTTCA
AATAGGATAAAAATGGACGTTTACTTCAGAAGAACTGTTTGATCAGTACA
GAGTTGGACTCGACTATCGtcagctttttttatttaatcaaACTGATGTA
TTACCCTTTGAAATTTCAACAGATTACCaaaaaatagaattcaaaataaa
acaggcataaacgttcaaataaaatGGTCTTGTTTGAGGTTGGGTGCAAT
CTTTAATTGTGTTTTATTCTATcttaaatctttaattttaataatttatt
tcCCTGTCAGATGTTTTCTATGTCTCCCTACCCAAATTTTTCATAAGTGA
AAACCCTACAAAAGCATTGAGAAAGGTCACAATGATAATTCCTGACTATT
TCATATAAACGGTGCTCAAAACGACATGAACATTGCGACTTATCGCACGT
ATATTAAACACATACCAGAACGCCAGCCAGTGAGAGCTTTTCATTTCATA
AAAACTTCATAATTAAATATGAAAGGAATTATTGAAGATTCTTAATTTGG
TTGAAACACCCACACCCCATCCATTTTCCtctttgtttaaaacaaaaagt
tcGACTGCTTGTTGATGAAATTAATGGaaggaaaactaaaaaaaattgtt
ccaaCCGGGGTTACACTGGATTACAGATAAATTTCTCCCTTCAACCCTTA
AATCTCCA

Coding sequence (CDS) from alignment at sc0000005_pilon:2771134..2772691+

>MSTRG.1135.1.p1 ID=MSTRG.1135.1.p1|Name=MSTRG.1135.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=357bp|location=Sequence derived from alignment at sc0000005_pilon:2771134..2772691+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAAAGACGCCGAAGTAAACCGTGTGGCGGCAACTGCCGTTGCGGC
CGCTATCGCTTCTGCCACTGCAGAACACATTGCAAAACAATCCAACCCAA
CTATGGGTGCTAAAGCGGCCGCGCGTGCAGCAGAGGTGGCCGATGCGGTG
GCAAAAGGCGATTCAGAACGTGCGTCGCAGGCTGTCATCGCAGCTGCAAA
AGCAGTCGAGGAAATTATCGCATTTTCTGTTAATCGACAATCGATATCTT
CGTATAAAGCGGTTGGTGAggattcgatgacgtcattaaatgAGAACAAC
TGCGGACGACGAACGAACGGCATGTCGAAGAAAAGTCGGATGTGTATATT
GCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1135MSTRG.1135Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1135.1.p1.exon1MSTRG.1135.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1135.1.p1MSTRG.1135.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:2771134..2772691 +