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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:30181..34243- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11345.1.p1 ID=MSTRG.11345.1.p1|Name=MSTRG.11345.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4063bp|location=Sequence derived from alignment at sc0000082_pilon:30181..34243- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAATTTGCATGAACGGTATGGGAATACACCAAAAAAATATTCTCCAAG
CATGAATACCTTTACAAATTGCAGGGACGCAATATTGCTAATTCTGGTTG
TGCCAAACATCTCCAGAGCCGGTGCTGTTGCCAATATGACCCTTGAAGAA
TACAAGAAGGCAACAGTAACGGCTACTGGAAAATCTTCAATTTTGGTCAA
GAAGCACAAAACAGCGAAGGACTATGGGCCAGCTGAGGTATTGATTCGCC
CCGAAAATAAAGTGCTCCTGGATACGTACGTCAATGTCATCCGTGCAAAT
GTGCCAGGCCAGAAAGATCCAGCAGTATTCATCCACTGGACTGGGACACA
GTTCGATGCTACTGGTGGAATTAGTATCCAACTTTACAGTATTTTGAAAA
AGTGTATTCCAGAAGTTTTTCAAGGAGACAAGAAAGCCAGTTGCACAATT
ATTCGAAAAAGCCTGGTGACTTTCTTTTATAAGGAATTTCCAGAAATGAA
AGAAAAACTATCTAAATTAATGAAGCATAAAGTAGAGACTGCTGAAAAAT
TTTATAATACTAATCGAATGCGGGCTGAATGTGACCAGACATTCGACCTT
GTTGAAAAGCATCTCTTCGGCGACTTCAACAACTATCTTTGCGAGGAGGA
AAAACGGAAGGCTGGAGAATCGCAATCACGCAAGCATGAAAACGAAACGG
AAATAGCAACTGATGACGATGATCCTGAGGATCCCGATTACATCGATGAC
TCTTTTTCCAGACCTAGACCAATAGCGTTATGGGACGATGAGTCGGAAAA
AGAGTTAATCGATGTCTTCGGTGATCAGAACTATGAAAGTTGGTCTATGC
CAATCATAGGTCTGAAAAAATCAGAAAGTAACATTTTGAAAAAGTTTGGT
TCGAAACAAATTTACGACAAACTTCGGAAATTGAAGGCAACCGGAAAACT
TGGTGGTGAAAAAGCTGATGAAGTGCCTTCAAAGAAAGCCAAGTTTTCCT
TCTCGACGGAGCAAACTCTGATGATCCGTGATATGTTCAAAGGTTTGATT
AATGGACGTGGCAGTGTTGTGGCTACGGATGTTATTGTTGAATTCAAAAC
AAAACCAGCAATATCGAGAGCCCTTTTTGAAGGCATTGACGACGAGGCAA
TCGTGAATAAGGTAAGATATGAACGGGCAAGAAAAAGGAAGAAAAAGTAA
TAAAATATTTATAGTTGCAAATACGAAAACAGCCGGTGAAGGAATTTCTT
AAAACACACTTTTTTTATAAGAATAGTGTACTTTGGCTGAGGGTCTTAAG
AACAAAAGTTGGTCCCAAGTTAAAAAAAAAGATTTTTGTCCTAAGAAACA
ACTTTTTTTTAATTCGATGTGTTTTTAAGTTTTTAAATCAAAAGTGTCTC
ATGTCTCGAGATAGCAAAATTTTGTTTTAAGCTCTTACACTTTTTAGTAA
TTGATTTTTAATTCAAATGTTATAACGTTTTTTGAGACTAGCTGATGTTT
GATTTCCTCCTAATTAATATTTTCATTATTTGTCCGCATGTCGCTTATGG
GTTTGCTTCAATTTCATTTTATTTATCAGTTTTGATTAAATTGAACAATT
TAATAGTTTATTTTTCTCTTATTTCTCGTTTTTATGGTGTTTCAGTGGTT
AATTAGCGTGTTCATCGTTATGAAATAAACTTTTATCGAGATTTTATAAT
TTTATGTTATGTTAATTTATTCAAATTTTAATATCATTTATCTACTTTTC
ATTTTTTGTCACCTTTGTTGAAATTTGCTAAAAATTTTGGGGAAAATGCT
CTCATTTTTTCACCACTTTAAAAAGTCACTTCATAGACCGTTCTGAAAGT
GTATCCAATCTTGTGAAAATATAGTTTTTGTTGAAAAAATTATTTTCTCA
GTTAGTTCAAATTAGATTGAGAAATTAATAGTTTATTTTTCTCTTGTTTT
TCGTACTTATGGTGTTTCAGTGCTTAATTAGCGTGTTCAACGTTTTTTGT
CGAAATCTTATAATTTTATGTTAATTTATTCAAATTTTAATATCATTTAT
CTACTTTTCATTTTTTGTCACCTTTGTTGAAATTTGCTAAAAATTCTGGG
GAATGCTCTCATTTTTTCACCACTTTAAAAAGTCACTTCATAGACCGTTC
TGAAAGTGTATCCAATCTTGTGAAAATATAGTTTTTGTTGAAAAAATTAT
TTTCTCAGTTAGTTCAAATTAGATTGAGAAATTAATAGTTTATTTTTCTC
TTGTTTTTCGTACTTATGGTGTTTCAGTGCTTAATTAGCGCGTGTTCAAC
GTTTTTTTGTCGAAATCTTATAATTTTATGTTAATTTATTCAAATTTTAA
TATCATTTATCTACTTTTCATTTTTTGTCACCTTTGTTGAAATTTGCTAA
AAATTCTGGGGAATGCTTTCATTTTTTCACCACTTTTAAAAGTCACTTCA
TAGACCGTTCTGAAAGTGTATCCAATCTTGTGAAAATATAGTTTTTGTTG
AAAAAATTATTTTCTCAGTTAGTTCAAATTAGATTGAGAAATTAATAGTT
TATTTTTCTCTTGTTTTTCGTACTTATGGTGTTTCAGTGCTTAATTAGCG
TGTTCAACGTTTTTTGTCGAAATCTTATAATTTTATGTTAATTTATTCAA
ATTTTAATATCATTTATCTACTTTTCATTTTTTGTCACCTTTGTTGAAAT
TTGCTAAAAATTCTGGGGAATGCTCTCATTTTTTCACCACTTTAAAAAGT
CACTTCATAGACCGTTCTAAAAGTGTATCCAATCTTGTGAAAATATAGTT
TTTGTTGAAAAAATTATTTTCTCAGTTAGTTCAAATTAGATTGAGAAATT
AATAGTTTATTTTTCTCTTGTTTTTCGTACTTATGGTGTTTCAGTGCTTA
ATTAGCGTGTTCAACGTTTTTTGTCGAAATCTTATAATTTTATGTTAATT
TATTCAAATTTTAATATCATTTATCTACTTTTCATTTTTTGTCACCTTTG
TTGAAATTTGCTAAAAATTCTGGGGAATGCTCTCATTTTTTCACCACCTT
AAAAAGTCACTTCATAGACCGTTCTGAAAGTGTATCCAATCTTGTGAAAA
TATAGTTTTTGTTGAAAAAATTATTTTTTCAATTAGTTCCAAATAGATTG
AGAAATCAATAGTTTATTTTTCTCTTGTTTTTCGATGGTGTTTCAGTGGT
TAATTAGCGTGTTCATCGTTATGAAATAAACTTTTGTCGAAATCTTATAA
TTTTATGTTAATTTATTCAAATTTTAATATCATTTATCTACTTTTCATTT
ATTTTTTTTTCAGTTGGTTGAAATTTGCTAAAATTTTTGGGATGCTTTCA
TTTTTTTCACACTTTTAAAAGCCACTTCATAGACTGTTCCGAAAGTGTAT
TCCATCTTGTGACATTTTGACTTTAAAAAATATCTGCATTGTTGAAAATA
CTGCAAAATACTAAATCTGCAATCATGGACATATTGGTTTGTAGAATTTT
CAAAAATTCCCCAAAAGTGAAAAGAAAAGCCTTTTTGACGCTTGGGGAAT
TTCCCCAAATGGACCACAAGTGGTTATTTGGTAGAAAACACCTACAGGCT
TCCTAGTAGTCCTTATGGCTTTAGTCCTAGTGTAATTTGTACTTTTCTAC
TTCCAATGACTGAAAATAGGTGCACTTCAGCCGCACAGCAAAACTCATTG
AACCCTCAATCTTCAATCTTAGCCAAAAAAGGGCATAAAGACTTTGCAAA
AATGCATTTCCTTCAATATCGAAGGCTGGACTTGTCCCCCGAACTATCCA
AATCCAATAAAAAACAACAATGGCTCTGGTAAAAATGGGTTTTCAGAGCT
GATTTTAAAAATTTTCATGTATTTTCTAAAAGTCTACAACCTTTTGTCTG
GGATTGTGCAATACACTTCTTGCCTAAGATTGCGCCAGCATGAAACAGCG
TGTAGAAATCGTAAGTTAGTTCTTTATTACACCCCCTTCTCACAAACCCA
CTGGTAACCCTTCCCACTCGAAAAATTGGCCAATATATCGTCCCCGGTGG
AAAATTAAACCCC Coding sequence (CDS) from alignment at sc0000082_pilon:30181..34243- >MSTRG.11345.1.p1 ID=MSTRG.11345.1.p1|Name=MSTRG.11345.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000082_pilon:30181..34243- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTGAAATTTGCTAAATGAATACCTTTACAAATTGCAGGGACGCAAT
ATTGCTAATTCTGGTTGTGCCAAACATCTCCAGAGCCGGTGCTGTTGCCA
ATATGACCCTTGAAGAATACAAGAAGGCAACAGTAACGGCTACTGGAAAA
TCTTCAATTTTGGTCAAGAAGCACAAAACAGCGAAGGACTATGGGCCAGC
TGAGGTATTGATTCGCCCCGAAAATAAAGTGCTCCTGGATACGTACGTCA
ATGTCATCCGTGCAAATGTGCCAGGCCAGAAAGATCCAGCAGTATTCATC
CACTGGACTGGGACACAGTTCGATGCTACTGGTGGAATTAGTATCCAACT
TTACAGTATTTTGAAAAAGTGTATTCCAGAAGTTTTTCAAGGAGACAAGA
AAGCCAGTTGCACAATTATTCGAAAAAGCCTGGTGACTTTCTTTTATAAG
GAATTTCCAGAAATGAAAGAAAAACTATCTAAATTAATGAAGCATAAAGT
AGAGACTGCTGAAAAATTTTATAATACTAATCGAATGCGGGCTGAATGTG
ACCAGACATTCGACCTTGTTGAAAAGCATCTCTTCGGCGACTTCAACAAC
TATCTTTGCGAGGAGGAAAAACGGAAGGCTGGAGAATCGCAATCACGCAA
GCATGAAAACGAAACGGAAATAGCAACTGATGACGATGATCCTGAGGATC
CCGATTACATCGATGACTCTTTTTCCAGACCTAGACCAATAGCGTTATGG
GACGATGAGTCGGAAAAAGAGTTAATCGATGTCTTCGGTGATCAGAACTA
TGAAAGTTGGTCTATGCCAATCATAGGTCTGAAAAAATCAGAAAGTAACA
TTTTGAAAAAGTTTGGTTCGAAACAAATTTACGACAAACTTCGGAAATTG
AAGGCAACCGGAAAACTTGGTGGTGAAAAAGCTGATGAAGTGCCTTCAAA
GAAAGCCAAGTTTTCCTTCTCGACGGAGCAAACTCTGATGATCCGTGATA
TGTTCAAAGGTTTGATTAATGGACGTGGCAGTGTTGTGGCTACGGATGTT
ATTGTTGAATTCAAAACAAAACCAGCAATATCGAGAGCCCTTTTTGAAGG
CATTGACGACGAGGCAATCGTGAATAAGTTGGTTGAAATTTGCTAAATGA
ATACCTTTACAAATTGCAGGGACGCAATATTGCTAATTCTGGTTGTGCCA
AACATCTCCAGAGCCGGTGCTGTTGCCAATATGACCCTTGAAGAATACAA
GAAGGCAACAGTAACGGCTACTGGAAAATCTTCAATTTTGGTCAAGAAGC
ACAAAACAGCGAAGGACTATGGGCCAGCTGAGGTATTGATTCGCCCCGAA
AATAAAGTGCTCCTGGATACGTACGTCAATGTCATCCGTGCAAATGTGCC
AGGCCAGAAAGATCCAGCAGTATTCATCCACTGGACTGGGACACAGTTCG
ATGCTACTGGTGGAATTAGTATCCAACTTTACAGTATTTTGAAAAAGTGT
ATTCCAGAAGTTTTTCAAGGAGACAAGAAAGCCAGTTGCACAATTATTCG
AAAAAGCCTGGTGACTTTCTTTTATAAGGAATTTCCAGAAATGAAAGAAA
AACTATCTAAATTAATGAAGCATAAAGTAGAGACTGCTGAAAAATTTTAT
AATACTAATCGAATGCGGGCTGAATGTGACCAGACATTCGACCTTGTTGA
AAAGCATCTCTTCGGCGACTTCAACAACTATCTTTGCGAGGAGGAAAAAC
GGAAGGCTGGAGAATCGCAATCACGCAAGCATGAAAACGAAACGGAAATA
GCAACTGATGACGATGATCCTGAGGATCCCGATTACATCGATGACTCTTT
TTCCAGACCTAGACCAATAGCGTTATGGGACGATGAGTCGGAAAAAGAGT
TAATCGATGTCTTCGGTGATCAGAACTATGAAAGTTGGTCTATGCCAATC
ATAGGTCTGAAAAAATCAGAAAGTAACATTTTGAAAAAGTTTGGTTCGAA
ACAAATTTACGACAAACTTCGGAAATTGAAGGCAACCGGAAAACTTGGTG
GTGAAAAAGCTGATGAAGTGCCTTCAAAGAAAGCCAAGTTTTCCTTCTCG
ACGGAGCAAACTCTGATGATCCGTGATATGTTCAAAGGTTTGATTAATGG
ACGTGGCAGTGTTGTGGCTACGGATGTTATTGTTGAATTCAAAACAAAAC
CAGCAATATCGAGAGCCCTTTTTGAAGGCATTGACGACGAGGCAATCGTG
AATAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000082_pilon | genome | sc0000082_pilon:30181..34243 - |
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