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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1335263..1339529+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11339.1.p2 ID=MSTRG.11339.1.p2|Name=MSTRG.11339.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4267bp|location=Sequence derived from alignment at sc0000081_pilon:1335263..1339529+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAAACAACAAATAAACAGAGAGGGAGAAAGAGGAATAACATCAACACA
AACACAATGACCATTGACGAACATGGAATTCCCGAATGTTATTTAGGGTT
GATTGAAACACTGAAATTACCGCCACTGCGACCGCCACCGCCCCAACAAG
GAGGACGAAATGATTCTAACGGTACCTTAGGTAGGTGTCTTTATCAGTGT
TGCAATCAGTGAaataatatattggcaccaGCCTAAAATGTCACCGGATG
GACTCACTTCTCTCTCGCTGAAGCAGatatatcataaaaaaagaatgccT
TAAGTGAAGGCTTCGGGACACgagatttttttttcgcgttggtgcaatgc
aaaagacacgctgatttcgtcccagggacaaaagtgagagaagcacaaat
gttattaaaagagaAATGGTGTGGAGACACTAGAAAGCGTTCCTGGTTGA
taggatggagcatgttgcattgtaccaacacgaaaaaaacttctcgtgtc
cccaagccttaagacTTTCTGCTCAATGGGGTTTTGCTGAACTAACATCC
CCCTGTATGTTTCTACTCGAATGAGGAGTTTTCTTTTCAGCACATAGAAA
TCTGAGCGGTTGGGCGTGGATCAGTGCAAAAAATCGACTGTCTAAAATTA
CTGGGATATCTACACAAAATATCGACTCTTTCTATCTGTCGAAAATAAGG
GCCGttcacatagtacgtacgcaccacggggggtcttctcaaaagcgtat
gcttgcgtataGCGGGaagggaggggtcaaaggaaaatgtacgtacgcag
aaaaaattttttcatagcccttttttgcttgtttttttgtcgacttttac
acttcttatacgcatcaaggaaaagaaaaagtttcttaataaacattgag
tttcatgtatgaaataaaggtctgaagcaaacgatttgaattagaaattt
tcttcaaccgagggagtgggggtgaatgaaaaagtgcGTACTCAcaaggg
ggtatagccatttgcgtactcttgcgtacaggggggagggggtactttaT
TTTCGAccttttagtgcgtacgtactatgtggacggtcCCATAGTGTTAC
AGAACCATATTTTCATAAGACTTAAGCACattttacaaaacaaaaaccCA
GTTCAATTCTGGTTATGTTGTCAAGCCGGGTTCAATCTGCTAGTCGTCAG
GAATTGAAACATACTTTAATCGGTTTAACTTTTGTGAGATTAAATTTAGC
GATCTAATTTTGCGAGTCacggttttgaaaaatttcgcgtggatttaatt
tcgcgaataagcctaaaaacagctgaaaaataatcattttttgtcaaaaa
tcggACTTTGGACTGGTTTCACCGCCGAAAatgtgattttaaaattttta
tggtggatttaatttcgcgagtcaggaactcacgcgttttcgcgagtttt
aatttcgcgaaaatggaaaaattcgcgaaatctagtgaaagttaatccga
ttaaagtagacATTATTTTCATTATCTGGGTCATTAATTTCGAATGTCTT
GCATTTCACTTAGGTGGAAATAGTATGACAGACGACCTTAACAACAGTTA
TTATGCGTACGGTATCGGGCCGTTTTTATTCCTCTTCATTGTCCTATGGA
ACGGCCTTCTCATCTACAGTCTATTATCGAACCGACAAAAACGAAAACGA
ATCAGCATCACAAAAAGACTATTCATCTATCACTCATGCACCGATCTCAT
TACTGGATTAGTCGTGGTTCCCATACAAATAACGGCTCACTTTCAGCATG
GATACACGTGCTGGTATCTTAGCCTAGCTGTCATGTTTACAGTTTTCAGT
CAATGTACTGGTGTTAGTACCTTACTGACTGTTTCATGGTTAAGGTGGGT
TATTTAAAGTATCTTAGCCTAGCTGTCATGTTTACAGTTTTCAGTCAATG
TACAGGTGTTAGTACCTTGCTGACTGTTTCATGGTTAAGGTGGGTTAATT
TAAAGCTAAACATTACTGAAATCGTACACataggttgcaaaattaaaaca
CTCCCTtatcacagacccagtgggattttatcagccagcgGGGGTATAGA
TAgtggaccaaaactcgatggggattgatattcccatatttttttatgCC
AGggcctggggggggggcaaaattAGATGGGGTCGatattttgggcaatt
tttccagtgagaaggggtccctgttggtctgtgagaagggggtgttatta
TCTTAATGTTTCCAAATACTACGATATCATCACAaaacactacacgtttt
tttataagaacatcaaaattttttgaagccttcggatgttcttaactttt
tgggttttaagcttgaaaatgttcttaaaatgttcttaatttcactattt
tgtgaccatttttacctatTTTACTAAGAAATTGGCTTCTCATAGGCCCG
GtaggattttatcagccagtgggggtataGATAGTGGACCAAAACTCATC
TGGGATTGATATTCCATAtttttttATGCCTATATGAAGATATTTTGGGG
AATATTTTCCAGTGAGAAGGGGGTCCCAGTGGGAAAgtgagaagagggtg
ttatTATcttgttttagagtctgcgaagccttacaatgttcttaacttgt
tcttaacattttggccatcgaagtcttatgttcttaaccctttccgtgcc
gatgtcgtatatatccgacatgcaaattttcactctacttgccaatgtcg
gatatatccgacatcaaatttttttacctaattgCCGAGGCCTTTAAAAA
AGAGTGAGCTCTATTGCCGAGAAATCAGCTTTTAGGCAAATGGTTTTCTt
atttgccaatgtcgtatatatccgacataaaaaaatccataatagtagtg
aaagtatatattaagtgctcaaaagatttatttcaggtttattttagtct
atcataaaatatatataaaacaaaatgtcaaatacaaatgtcaaacattg
gcaaataggaataaaatatccttgtcgtatatatacgacatgcggcaaca
cgagttaaaatttgcatgtcgtatatatacgacatcggcaaatcaggtta
ctaaaaaaaattacccctcggcaaatggattggggtacaaaaatAAGGTA
ACGGCACGCAAAGGGTTAATagttattattaaaaaaaaaaacgagtatga
catgaaaaaaatcagaaatttcttCTTGTATCACACACTCCAGGTACCTA
TCCATCACCAAACCATTGTTGATCGTCAAAGCAACATGGGTACTACTAAC
AATCGGCCTCGAATTCATTCTCACATTGACAATCTCACTGtacacatttt
ttgtttatctccGAAAATCCACAGCGCATATGATCGCTGCTAACTTCCTT
GTACTGGTTATCTATCTCTCATTAAGCAGTATTATACTCATCGGTTTTAA
CTTGAAATCTTTTACATCGTTGGGTCAACAGCAAAGGCGAATGTCGATGT
ATGATGATAATACACGTAATAGCAAACGTAATAACAGGGCTGTTCTTACA
CTGGCTCTTATAACATCATGTTACTTGATTTGTACTGTACCTTACATAAT
ATATTCCTGCATGTTGGGAAGTTATTTATACTCGGAGAACGCtgaattat
tgaaatatttccGATATCTGGAATCGTTTATTTATGTCCAAGCTTTGTAT
TTATTGAACTGTGGATTAACAGCCATGATTTATGTATGCAGGAATAAACG
ACACTTCTTGAAAAGACGAGTTACAACTCGGTCTAGGATCGGTCAACAGA
AACTTTCAGTAGGACTTAAACAAAGACGGCATCAAAATGAGAGCTCGGAG
ACAATTTCAAGTTCAACATCGGctgtttgaaattatgaaaagacGAGTTA
CAACTCGGTCTAGGATCAGCCAACAGAGACGTTCAGTAGGACTTAAACAA
AGACGGAATCAAAATGCGAGCTCGGAGACGCTTTCAAGTTCAACATCAGC
TGTTTGAGATACAATTATGAAACTGATGAGTTATAACTCGGTCCTGGACC
GTAAGATTCAAAGAAAAACGAGATCAAAATACGAGttgaaaaatggttaa
aatccAAAGAATGGTCACCCATTGCATCTACTACGCCATCATGAATAGCT
TCATCAAAATGCACGTTCCGGTTTCAAATTCGACTTTGATTTCGACTGTT
TAACCCCAAATACAAATAAACGATATCGgtttaacgtgaaaactcagatt
tgatctccgaatattgc Coding sequence (CDS) from alignment at sc0000081_pilon:1335263..1339529+ >MSTRG.11339.1.p2 ID=MSTRG.11339.1.p2|Name=MSTRG.11339.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000081_pilon:1335263..1339529+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAACAACAAATAAACAGAGAGGGAGAAAGAGGAATAACATCAACACAAA
CACAATGACCATTGACGAACATGGAATTCCCGAATGTTATTTAGGGTTGA
TTGAAACACTGAAATTACCGCCACTGCGACCGCCACCGCCCCAACAAGGA
GGACGAAATGATTCTAACGGTACCTTAGGTGGAAATAGTATGACAGACGA
CCTTAACAACAGTTATTATGCGTACGGTATCGGGCCGTTTTTATTCCTCT
TCATTGTCCTATGGAACGGCCTTCTCATCTACAGTCTATTATCGAACCGA
CAAAAACGAAAACGAATCAGCATCACAAAAAGACTATTCATCTATCACTC
ATGCACCGATCTCATTACTGGATTAGTCGTGGTTCCCATACAAATAACGG
CTCACTTTCAGCATGGATACACGTGCTGGTATCTTAGCCTAGCTGTCATG
TTTACAGTTTTCAGTCAATGTACTGGTGTTAGTACCTTACTGACTGTTTC
ATGGTTAAGGTGGGTTATTTAACAAACAACAAATAAACAGAGAGGGAGAA
AGAGGAATAACATCAACACAAACACAATGACCATTGACGAACATGGAATT
CCCGAATGTTATTTAGGGTTGATTGAAACACTGAAATTACCGCCACTGCG
ACCGCCACCGCCCCAACAAGGAGGACGAAATGATTCTAACGGTACCTTAG
GTGGAAATAGTATGACAGACGACCTTAACAACAGTTATTATGCGTACGGT
ATCGGGCCGTTTTTATTCCTCTTCATTGTCCTATGGAACGGCCTTCTCAT
CTACAGTCTATTATCGAACCGACAAAAACGAAAACGAATCAGCATCACAA
AAAGACTATTCATCTATCACTCATGCACCGATCTCATTACTGGATTAGTC
GTGGTTCCCATACAAATAACGGCTCACTTTCAGCATGGATACACGTGCTG
GTATCTTAGCCTAGCTGTCATGTTTACAGTTTTCAGTCAATGTACTGGTG
TTAGTACCTTACTGACTGTTTCATGGTTAAGGTGGGTTATTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1335263..1339529 + |
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