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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1294024..1296476- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11332.2.p1 ID=MSTRG.11332.2.p1|Name=MSTRG.11332.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2453bp|location=Sequence derived from alignment at sc0000081_pilon:1294024..1296476- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAACAACGTATTTCATGATTAAGTGTTGTATATGAGTTTTTTTGATT
TGATTTTGAAAGTAAAATGGCTAATCAAGTGAATATTGCAGGTATCGCTA
ATCAAACGAATATGGCAGGTATCACGCAGAAAGTTTTGTCTTTGAAACCA
TTACCAATCGATCCAACCAGATGTACTCCCAACAAATCGTTGTATCAGCA
GATTCTCAATAACAGTCAAGCCACGTCAGAAAGACAAGCAAAACAGTTCA
ACTTGGGGAACTCGCACTGTACAGCAAACCCTATGCATGCAGCCGACTTT
GTTCTTGAAAGGGAGTATGGAGACAGTTCTCTCTTTGTTCAAGGTGAACG
CACCAGTGTTTTCATACCACCCACGTTTGTTTCGAATCAATACAAAAAGT
CTTCTACCGCTATCCTTGATTATGACGTCAAAAAAGACATTGACAGACTT
TTGGTTAGTTTGAAACAACATTCACCAACGTATTGGCTGACCAAAGAATT
GGAATCTTTTATGCAAACGCAAAACAATGCTGATTCTGTCGACAAGAAGG
CGTTTGGGAAATGGATTCTTAACCTTCAAATCATGTATCTGGTTATTAGT
GAACTGAAAACTGACCAAGTGACCCTGCCTAAAACTACTTCCGAATTAGG
AGTTTTCTTTCAAGGATTTCTTGCAGTGCTCTCTCCCACATCACCTCTGG
GGACACTTCTCCTAAAAAATCCGAAAAACCTCAAAAAGCAGATCAAGCAA
ATGATTGAAGAAACACCAAGCGATGATTCAAACCTTCGATGGCTATTCAC
ATTAGAACTGTCAGAAGTTGGTGAAAAGCTGGAACACTGGTTATATGACC
AGCTTCTACCATTGAAAGATGACAATCTCCAAAACACAGTCGTTCTTTCT
TCACTCATCTTTCTGACAAATGTGCAAAATAAAATGCACAAAGAGACAGA
TTTTCTAATCATATCTTGGGAACGGAAACTTATCATTTCAATCGAGCTGA
AACGAACAATCGCAGATGATAAAGCTTTCAAGCAGTTAGAATCAAACCAT
CGGATTTTCGAGGAAAGGTTAGGGGACCAATTAATTTCAGGTTGGACGTA
TTTTCCGGTGGTCGGCGTGGAACACGACAACCTTTCAGTAAACAGTCAGC
ATTATATCACAATCCAAACTGAAATAAAACAATGGCTGACCAGTATCTTC
AAAAAGTTCCCGACTATTCCAGCAGCGTCCATACCGAATCCATTGGACGA
AGCTAAGGAGATACTCAAAATCCTGGTCTTTGCCATTCACGTTTCGAAAA
AAGATCAAACCGCACCTATTACGAGCTCAACATGGGTCGAATACACAAGC
AACGCAATCGAAAATGTTTCGACTAGCCACAACATCTTATTCTACTCCAA
CCAACAGATGGCCATAATGAACAACGATGACCAACGCTACAGGAGAGCGA
TCATTGTTGGGCCTTTTGGTGTTGGAAAAAGCATCTTACTTAAACAGAAG
GCCATACAATTAAACAAAAGACCTGAATACAAAGGAAAAGTTTTATTTGT
TGTCGATTCGTCTTACGTAACAGCCACTAAACCCATGCAATTTCATCGTC
TGAAGATTGACTTGGAGAATCAACATGGAATATTTGTTGAAGAGATCAAT
TCGCTTTTGGTAGGTAATCAATTGTTTAATGATTGTGATGGATTGATCTT
TCATTTTTAACTTGTAAAATCTTTATTCTTGAGGTGTCTTCCTTTTCATG
TTTTCAAACAAGTAAAGAATATCTTTTTCATTTTCATTTGATAGTCATCT
CAAAGAGGTCATCAAACCACGTGACATCAAAGCATCGTTCATCGATGAAT
TTGACACCTGGATATTTCAAGTCTTACATAATCGGTTTTTATTATTCATT
TCATAGACTCAGAAGGTTCGTCTTGTTGACATGATTATAAGACGGGACAT
CAAAGCGTTGTTCATCGATGAATTTGAAGTGTTTTCACGAACTGAAAAAT
GGATAAGGAAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGTCCCA
TCGACAGACTTCTTGAGTGATGGAAGTTACCAAGAATTTTCGACTGACTT
TTTAGTCGTCAATCTCGAACAGAATTTTAGAAATTCTCAACAGATCGTCA
AAGCAACCAACTCAGTAGCCGAGGAGAAAGGTTATGTATACAAAAAAGGG
ATCGTTATGCCACTTGGTAATTTTCCGGATGGTTGCGAGCCAATACTTGT
TGACACGTTCGAAGAAGCAGTAATAGAAGCGAGAAAACGAGCAAATGAAG
GAATCCTTGTGATTGCTGATCAACGAATCAATACAAAAGATCATTACGAC
GTTCTAGATCGGTTGAACGAGAATTATAAAGCATATCACTTAATAAAAAA
TGATTTTAAAGAGGAAGAAAATCCGTTTAAGTTTCTTCAGGAAGGAAATA
TTT Coding sequence (CDS) from alignment at sc0000081_pilon:1294024..1296476- >MSTRG.11332.2.p1 ID=MSTRG.11332.2.p1|Name=MSTRG.11332.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4278bp|location=Sequence derived from alignment at sc0000081_pilon:1294024..1296476- (Clytia hemisphaerica_ch_hm2_pilon)
ACTCAGAAGGTTCGTCTTGTTGACATGATTATAAGACGGGACATCAAAGC
GTTGTTCATCGATGAATTTGAAGTGTTTTCACGAACTGAAAAATGGATAA
GGAAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGTCCCATCGACA
GACTTCTTGAGTGATGGAAGTTACCAAGAATTTTCGACTGACTTTTTAGT
CGTCAATCTCGAACAGAATTTTAGAAATTCTCAACAGATCGTCAAAGCAA
CCAACTCAGTAGCCGAGGAGAAAGGTTATGTATACAAAAAAGGGATCGTT
ATGCCACTTGGTAATTTTCCGGATGGTTGCGAGCCAATACTTGTTGACAC
GTTCGAAGAAGCAGTAATAGAAGCGAGAAAACGAGCAAATGAAGGAATCC
TTGTGATTGCTGATCAACGAATCAATACAAAAGATCATTACGACGTTCTA
GATCGGTTGAACGAGAATTATAAAGCATATCACTTAATAAAAAATGATTT
TAAAGAGGAAGAAAATCCGTTTAAGTTTCTTCAGGAAGGAAATATTATGG
CTAATCAAGTGAATATTGCAGGTATCGCTAATCAAACGAATATGGCAGGT
ATCACGCAGAAAGTTTTGTCTTTGAAACCATTACCAATCGATCCAACCAG
ATGTACTCCCAACAAATCGTTGTATCAGCAGATTCTCAATAACAGTCAAG
CCACGTCAGAAAGACAAGCAAAACAGTTCAACTTGGGGAACTCGCACTGT
ACAGCAAACCCTATGCATGCAGCCGACTTTGTTCTTGAAAGGGAGTATGG
AGACAGTTCTCTCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATACCAC
CCACGTTTGTTTCGAATCAATACAAAAAGTCTTCTACCGCTATCCTTGAT
TATGACGTCAAAAAAGACATTGACAGACTTTTGGTTAGTTTGAAACAACA
TTCACCAACGTATTGGCTGACCAAAGAATTGGAATCTTTTATGCAAACGC
AAAACAATGCTGATTCTGTCGACAAGAAGGCGTTTGGGAAATGGATTCTT
AACCTTCAAATCATGTATCTGGTTATTAGTGAACTGAAAACTGACCAAGT
GACCCTGCCTAAAACTACTTCCGAATTAGGAGTTTTCTTTCAAGGATTTC
TTGCAGTGCTCTCTCCCACATCACCTCTGGGGACACTTCTCCTAAAAAAT
CCGAAAAACCTCAAAAAGCAGATCAAGCAAATGATTGAAGAAACACCAAG
CGATGATTCAAACCTTCGATGGCTATTCACATTAGAACTGTCAGAAGTTG
GTGAAAAGCTGGAACACTGGTTATATGACCAGCTTCTACCATTGAAAGAT
GACAATCTCCAAAACACAGTCGTTCTTTCTTCACTCATCTTTCTGACAAA
TGTGCAAAATAAAATGCACAAAGAGACAGATTTTCTAATCATATCTTGGG
AACGGAAACTTATCATTTCAATCGAGCTGAAACGAACAATCGCAGATGAT
AAAGCTTTCAAGCAGTTAGAATCAAACCATCGGATTTTCGAGGAAAGGTT
AGGGGACCAATTAATTTCAGGTTGGACGTATTTTCCGGTGGTCGGCGTGG
AACACGACAACCTTTCAGTAAACAGTCAGCATTATATCACAATCCAAACT
GAAATAAAACAATGGCTGACCAGTATCTTCAAAAAGTTCCCGACTATTCC
AGCAGCGTCCATACCGAATCCATTGGACGAAGCTAAGGAGATACTCAAAA
TCCTGGTCTTTGCCATTCACGTTTCGAAAAAAGATCAAACCGCACCTATT
ACGAGCTCAACATGGGTCGAATACACAAGCAACGCAATCGAAAATGTTTC
GACTAGCCACAACATCTTATTCTACTCCAACCAACAGATGGCCATAATGA
ACAACGATGACCAACGCTACAGGAGAGCGATCATTGTTGGGCCTTTTGGT
GTTGGAAAAAGCATCTTACTTAAACAGAAGGCCATACAATTAAACAAAAG
ACCTGAATACAAAGGAAAAGTTTTATTTGTTGTCGATTCGTCTTACGTAA
CAGCCACTAAACCCATGCAATTTCATCGTCTGAAGATTGACTTGGAGAAT
CAACATGGAATATTTGTTGAAGAGATCAATTCGCTTTTGACTCAGAAGGT
TCGTCTTGTTGACATGATTATAAGACGGGACATCAAAGCGTTGTTCATCG
ATGAATTTGAAGTGTTTTCACGAACTGAAAAATGGATAAGGAAGGAGGTG
ATGCCACTCGTTGACTACTTATGGATCGTCCCATCGACAGACTTCTTGAG
TGATGGAAGTTACCAAGAATTTTCGACTGACTTTTTAGTCGTCAATCTCG
AACAGAATTTTAGAAATTCTCAACAGATCGTCAAAGCAACCAACTCAGTA
GCCGAGGAGAAAGGTTATGTATACAAAAAAGGGATCGTTATGCCACTTGG
TAATTTTCCGGATGGTTGCGAGCCAATACTTGTTGACACGTTCGAAGAAG
CAGTAATAGAAGCGAGAAAACGAGCAAATGAAGGAATCCTTGTGATTGCT
GATCAACGAATCAATACAAAAGATCATTACGACGTTCTAGATCGGTTGAA
CGAGAATTATAAAGCATATCACTTAATAAAAAATGATTTTAAAGAGGAAG
AAAATCCGTTTAAGTTTCTTCAGGAAGGAAATATTATGGCTAATCAAGTG
AATATTGCAGGTATCGCTAATCAAACGAATATGGCAGGTATCACGCAGAA
AGTTTTGTCTTTGAAACCATTACCAATCGATCCAACCAGATGTACTCCCA
ACAAATCGTTGTATCAGCAGATTCTCAATAACAGTCAAGCCACGTCAGAA
AGACAAGCAAAACAGTTCAACTTGGGGAACTCGCACTGTACAGCAAACCC
TATGCATGCAGCCGACTTTGTTCTTGAAAGGGAGTATGGAGACAGTTCTC
TCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATACCACCCACGTTTGTT
TCGAATCAATACAAAAAGTCTTCTACCGCTATCCTTGATTATGACGTCAA
AAAAGACATTGACAGACTTTTGGTTAGTTTGAAACAACATTCACCAACGT
ATTGGCTGACCAAAGAATTGGAATCTTTTATGCAAACGCAAAACAATGCT
GATTCTGTCGACAAGAAGGCGTTTGGGAAATGGATTCTTAACCTTCAAAT
CATGTATCTGGTTATTAGTGAACTGAAAACTGACCAAGTGACCCTGCCTA
AAACTACTTCCGAATTAGGAGTTTTCTTTCAAGGATTTCTTGCAGTGCTC
TCTCCCACATCACCTCTGGGGACACTTCTCCTAAAAAATCCGAAAAACCT
CAAAAAGCAGATCAAGCAAATGATTGAAGAAACACCAAGCGATGATTCAA
ACCTTCGATGGCTATTCACATTAGAACTGTCAGAAGTTGGTGAAAAGCTG
GAACACTGGTTATATGACCAGCTTCTACCATTGAAAGATGACAATCTCCA
AAACACAGTCGTTCTTTCTTCACTCATCTTTCTGACAAATGTGCAAAATA
AAATGCACAAAGAGACAGATTTTCTAATCATATCTTGGGAACGGAAACTT
ATCATTTCAATCGAGCTGAAACGAACAATCGCAGATGATAAAGCTTTCAA
GCAGTTAGAATCAAACCATCGGATTTTCGAGGAAAGGTTAGGGGACCAAT
TAATTTCAGGTTGGACGTATTTTCCGGTGGTCGGCGTGGAACACGACAAC
CTTTCAGTAAACAGTCAGCATTATATCACAATCCAAACTGAAATAAAACA
ATGGCTGACCAGTATCTTCAAAAAGTTCCCGACTATTCCAGCAGCGTCCA
TACCGAATCCATTGGACGAAGCTAAGGAGATACTCAAAATCCTGGTCTTT
GCCATTCACGTTTCGAAAAAAGATCAAACCGCACCTATTACGAGCTCAAC
ATGGGTCGAATACACAAGCAACGCAATCGAAAATGTTTCGACTAGCCACA
ACATCTTATTCTACTCCAACCAACAGATGGCCATAATGAACAACGATGAC
CAACGCTACAGGAGAGCGATCATTGTTGGGCCTTTTGGTGTTGGAAAAAG
CATCTTACTTAAACAGAAGGCCATACAATTAAACAAAAGACCTGAATACA
AAGGAAAAGTTTTATTTGTTGTCGATTCGTCTTACGTAACAGCCACTAAA
CCCATGCAATTTCATCGTCTGAAGATTGACTTGGAGAATCAACATGGAAT
ATTTGTTGAAGAGATCAATTCGCTTTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000081_pilon | genome | sc0000081_pilon:1294024..1296476 - |
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