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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:1143659..1147396- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11324.1.p1 ID=MSTRG.11324.1.p1|Name=MSTRG.11324.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3738bp|location=Sequence derived from alignment at sc0000081_pilon:1143659..1147396- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTTAAAAGGAACGGTAGGCAGGACACAGGCGACTTTTATAAAACATA
TATAAAGCTTAGGTGTTAAATTCACAATGAGGCAAATTATTTTGGTTATT
ACTCTTTTGGCAATACTGACCCTGACACAAGCCATGATGAAGGTAGGTAT
ATGAAAATCATTTCGTTCTTTTTCTCACAACCCTTAAAACAATTTAAACT
GTTATATCTCCTGATGTAACAAGTAATTAGAAGCTTCTTTAATAGCTCGT
AAGATAGCTTCAGAGACTGGAAAATGTTACAATTCAAATTAAATCGCTAA
AGAACATAATCTAATAAAACAAATCCAAATTTGGCGGAAAACTATAAAAG
ACAAGTGATACTTTTATGGACCTACCTGGTTATGCATTTAACACATATAT
AATTGATATCTACGTGAGCGTGACTATTAAACAATCATTCAAAACCCAAA
TAGTGACGATCTATTAAAAGTAGTCGTTTGTTTCTTATAAAAAATCGTTT
AGAAACCAAAATTTCATGTTCTTTAAATATTCTTTCATATTCAAGCAAGC
AAAAAAACATCTATCTCGTAAAAAAAGTTGAGTAATTTTTAAATCGGGCT
TCGACAAATTTGAGTGTTTAATGCATCTTTGTGCAAAAAATCTCAAAGAA
TGAAAGCGCCAACCTCGAGAAAAGTACCTAAGTAATTGATAATGTGCTTA
TAAATAAATATCGAATTTGGCCAGTTTTTCTATAAAAACACGCCAAGCAG
CCAAAATTTAATGTCTAAACACACATATTCTTCAAAAGTAAGCCCTCGTA
GCAAAAAAACATCCATCTCATAAAAAGAATTGAGTAATTTGACTAAGAAT
ATTGATGTATGCTTATTAATAGTGATTCTTATAGATAAACATGCGTTTTT
TGAGCCAAAAAATTTTTTTTGCAAAAATCTGCTTTAGCCATCTTTTACCT
ATGATGGTACCCTACTTTCATTTTTGGCTCAAATTTGCCCAAAAAATTTT
TTTTCCGAAAATCGGGCTCCGTCACATTCGAGGGTTTATAGTTAAACATC
TTTGTGCAAAAAAATCAGAAAAAATTAATGAGCCAATCTCGAGAAAAGCT
GGTAACTAACGAACAAACGAACATACAACGGTTAATTTATAGGACCTCCA
CCGGGGTAGGTCCAAAAAGGGAGGAATGACTAAATATTCTTTTTGGGCGA
CTGATTGCCGACAAGATCGATCCTTCCAATTCCCTAACTTAAATATAATA
TTTTCAATCAAAAAACAGGGATCGAGTGCGCATGGATTCAATAATTACTG
TGGTAAAGATGGACGAGATGGACGAGATGGAAAGGATGGAAAAGACGGAA
TCGGAAAAGACGGAAAGGATGGCAGAGATGGTCGAAACGGAATTAATGGA
AAAGATGGAGTCAATGGAAAGGATGGAAAAAACGGAAAAGATGGGACTGC
AGCAAAAAAGAATTGGAAAGAATGTGCTTGGTATAACATCGCTGATGATA
AAGATCATGGAGTAGTAAAGGTGAGTAAGTTCAATGTCTATTAACTGAAC
TGGACCCGGAAACATGGGTAATTCTCAGTTCGTCAGCTCGGTGCCGTTGC
TTAACCTCTCCCTCCTGCACTGCAAATCTTCTCAAAAATTGTTGGCCACC
TCAAAGTGTTCAAAATCAATGGTCTGCACTATGCAATGTTGGAAAGAAGA
TAACAAGTGATACTTTTATGGACCTACCTGGTTATGCATTTAACACATAT
ATAATTGATATCTACATAAGCGTGACCATTAAACAATCATTCAGAACACA
AATAGTGACGATCTATTAAAATTAGTCGTTTGTTTCTTATAAAAAAACAC
GTTTAGAAACCAAAATTTCATGCTCTTGAAATATTTTTTCATATTCACGA
CTTCGAGAGCATCTCTTTTTAGCTGAAATTTACCCCAAATTTTTTTTTCC
AAGAATCGAGCTCCGTCACATTCGAGGGTGTATAGTTATGCATCTTTGTG
CAAAAAATCATAAAGAATAAAAGAGCCAATCTCGAGAAAAGCTAATACCT
AAGCAATTGATAGTGTGCTTATAAAAAAATATCGAATTTGGCCAGCTTTT
CTATAAAAACATGTCTAAACACATATATTCTTTAAAAGTAAGCCCTCATG
AGCAAAAAAAACATCTATCTCATAAAAAAGAATTGAGTAATTTGACTAAG
AACATTGATGTATGCTTATTAATAGTGATTCTTATAGATTAACATGCGTT
TTTTGAGCCAACTAAAATTTTTTTGCAAAAATCTGCTTGAACCGTATTTT
ACCTATGATGGTACCTTACTTTCCTGCAAAAAATCAGAAAAAATTAATGA
TCCAATTTTTCACAAAGTCCAAAAAACCCATTTTTTAGCCGTTTTTTGGC
CCAAATTTGCCCCAAATTTTTTTTTGAAAATCGGGCTCCGTCACATTCGA
GGGTTTATAGTTATGCATCTTTGTTCAAAAAATCGTAAAGAATGAAAGAG
CCAATCTCGAGAAAAGCTAATACCTAAGTAATTGATAATGTGCTTATAAA
AAAATATCGAATTTGGCCAGTTATTTTTTAAAAGCACGCCAAGCAACCAA
AATTTCATGTCGAAACACATATATTCTTTTTTAAAAGTAAGCCCTCCTGT
GCAAAAATCTCATAAAAAAATTGAGTAGTTTGACTAAGAACATTGATGTA
TGCTTATTAATAGTGATTCTTATAGATAAACATGCGTTTTTTGAGCCAAT
AAAATTTTTTTGCAAAAATTCGCTTAAGCCATCTTTTACCTACGATGGTA
CCCTACTTTCATGCAAAAAATAAGAAAAAATTAACGACCTAATTTTTCAC
AATGTCCAAAAAACCCGTTTTTTAGCCGTTTTTTGGCCCAAATTTGCCCA
AAAAATTTTTTTTTTGAAAATCGGGCTCCGTCACATTCGAGGGTTTATAG
TTATGCATCTTTGTGCAAAAAATCTGAAAAAACTAACGAGCCAATCATGA
GGAAAGCTAATAACGAACGAACAGACGAACGGACAAAGGTTAATTTATAG
GACCTCCACCGGGGTAGGTCCAAAAAGAGCAATCAACTAACGCAACGCGC
ACGCGTGTTACCTGGTGTTACTAAAAGTTTTGATTAATAAAACAAAGGTT
TTTCCATCAATTTTCTAGAGCTGCTCATTCAAAAAGAATTCAACCTCGAC
TTATATGAAAGTCGTCGTATCCTCAGGTATGAGAATCACTAATTGTAATC
AATGTTGCAAACGTTGGTTTGTCACTTTCGATGGACATGAATGTGCACCT
GTGCCGATAGACGGTATAGTTTACATGCATGAAGGGACCGGTAACAGATA
TAAGAATCAACATCGACCACAAGTTATCACTGGACATTGCAAGATCTCGA
AAAGCAACATAATCAACGTGGCTCTCAATGTTGGAAATTGCAATGGTTAC
GGGAATGTAGACGCTCAAACCGGCTGGAATTCGGCAACTCGAATACAAAT
TGAAGAGGTTGATGAACCACAACATTAGACAATCCAATGCTGTCACCCAA
AATCGTCAGCAAGTCTACAGGCGGACGAATGGCAGACACATCCGTCCTCA
GTTTTTTAAACAATTTCTTGATTTCATACGATTTTTATAAATCTTTTTAA
CTAAACACCTCTATTAGGGTAAGTTTTTCAACACTGTGCCCTACTTATTT
TTAGATTTCATGCCGTATAAGTTTGTAAACAAATTGAC Coding sequence (CDS) from alignment at sc0000081_pilon:1143659..1147396- >MSTRG.11324.1.p1 ID=MSTRG.11324.1.p1|Name=MSTRG.11324.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2034bp|location=Sequence derived from alignment at sc0000081_pilon:1143659..1147396- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTGCTCATTCAAAAAGAATTCAACCTCGACTTATATGAAAGTCGTCGT
ATCCTCAGGTATGAGAATCACTAATTGTAATCAATGTTGCAAACGTTGGT
TTGTCACTTTCGATGGACATGAATGTGCACCTGTGCCGATAGACGGTATA
GTTTACATGCATGAAGGGACCGGTAACAGATATAAGAATCAACATCGACC
ACAAGTTATCACTGGACATTGCAAGATCTCGAAAAGCAACATAATCAACG
TGGCTCTCAATGTTGGAAATTGCAATGGTTACGGGAATGTAGACGCTCAA
ACCGGCTGGAATTCGGCAACTCGAATACAAATTGAAGAGGTTGATGAACC
ACAACATTAGGGATCGAGTGCGCATGGATTCAATAATTACTGTGGTAAAG
ATGGACGAGATGGACGAGATGGAAAGGATGGAAAAGACGGAATCGGAAAA
GACGGAAAGGATGGCAGAGATGGTCGAAACGGAATTAATGGAAAAGATGG
AGTCAATGGAAAGGATGGAAAAAACGGAAAAGATGGGACTGCAGCAAAAA
AGAATTGGAAAGAATGTGCTTGGTATAACATCGCTGATGATAAAGATCAT
GGAGTAGTAAAGATGAGGCAAATTATTTTGGTTATTACTCTTTTGGCAAT
ACTGACCCTGACACAAGCCATGATGAAGAGCTGCTCATTCAAAAAGAATT
CAACCTCGACTTATATGAAAGTCGTCGTATCCTCAGGTATGAGAATCACT
AATTGTAATCAATGTTGCAAACGTTGGTTTGTCACTTTCGATGGACATGA
ATGTGCACCTGTGCCGATAGACGGTATAGTTTACATGCATGAAGGGACCG
GTAACAGATATAAGAATCAACATCGACCACAAGTTATCACTGGACATTGC
AAGATCTCGAAAAGCAACATAATCAACGTGGCTCTCAATGTTGGAAATTG
CAATGGTTACGGGAATGTAGACGCTCAAACCGGCTGGAATTCGGCAACTC
GAATACAAATTGAAGAGGTTGATGAACCACAACATTAGGGATCGAGTGCG
CATGGATTCAATAATTACTGTGGTAAAGATGGACGAGATGGACGAGATGG
AAAGGATGGAAAAGACGGAATCGGAAAAGACGGAAAGGATGGCAGAGATG
GTCGAAACGGAATTAATGGAAAAGATGGAGTCAATGGAAAGGATGGAAAA
AACGGAAAAGATGGGACTGCAGCAAAAAAGAATTGGAAAGAATGTGCTTG
GTATAACATCGCTGATGATAAAGATCATGGAGTAGTAAAGATGAGGCAAA
TTATTTTGGTTATTACTCTTTTGGCAATACTGACCCTGACACAAGCCATG
ATGAAGAGCTGCTCATTCAAAAAGAATTCAACCTCGACTTATATGAAAGT
CGTCGTATCCTCAGGTATGAGAATCACTAATTGTAATCAATGTTGCAAAC
GTTGGTTTGTCACTTTCGATGGACATGAATGTGCACCTGTGCCGATAGAC
GGTATAGTTTACATGCATGAAGGGACCGGTAACAGATATAAGAATCAACA
TCGACCACAAGTTATCACTGGACATTGCAAGATCTCGAAAAGCAACATAA
TCAACGTGGCTCTCAATGTTGGAAATTGCAATGGTTACGGGAATGTAGAC
GCTCAAACCGGCTGGAATTCGGCAACTCGAATACAAATTGAAGAGGTTGA
TGAACCACAACATTAGGGATCGAGTGCGCATGGATTCAATAATTACTGTG
GTAAAGATGGACGAGATGGACGAGATGGAAAGGATGGAAAAGACGGAATC
GGAAAAGACGGAAAGGATGGCAGAGATGGTCGAAACGGAATTAATGGAAA
AGATGGAGTCAATGGAAAGGATGGAAAAAACGGAAAAGATGGGACTGCAG
CAAAAAAGAATTGGAAAGAATGTGCTTGGTATAACATCGCTGATGATAAA
GATCATGGAGTAGTAAAGATGAGGCAAATTATTTTGGTTATTACTCTTTT
GGCAATACTGACCCTGACACAAGCCATGATGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:1143659..1147396 - |
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