MSTRG.11308.2.p3 (mRNA) -

Overview
NameMSTRG.11308.2.p3
Unique NameMSTRG.11308.2.p3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000081_pilon:958153..960471+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11308.2.p3 ID=MSTRG.11308.2.p3|Name=MSTRG.11308.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2319bp|location=Sequence derived from alignment at sc0000081_pilon:958153..960471+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCGAC ATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGATAA TGTTTCTCAAAGTCTGGGTTACGAACtcaaaaccacaagtgattggCCGA TGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTAAG AATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCATC TAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTATATTT GGCCCTTCGACATCTAATCAGGCATGTTATTTATAATCTgaagttttttt ctcttttaacacactaaatctttctcttttaaaaACTATTTACAAGATCA AAACTTTTCATAAGTAAAATATCACCATGCAATATCACCAGTACAAGGAA TTTTCAGGGAATAATTGCTAACTGATTTCTATGATTTTGATATAACAGAT TGAACGTTGGTGGAGAGAGCTCCATGATCGTTTGGAGAAGTTTTTCAAAG CTGGTCTTTCCTGGCTTAAAGACGAAAATCACTACGACCCTCATTGTGCA CAAGATAGGTTAGTTGTTAAAGTAAATTTAATCTACATAGAAATAtacac ttttaaaaaaattgacctcTTAAAAAAGATATGCCAAAATGTAATATCTG CTTGTTTGTTAACCCTAtctgccggggggggggggggtcttggttttttt CTCCTTTGAATTTTAACCGCTTGCccaattcttttcaaatttcttgaCTT CTCTACAAATTCAAATATTACAGTCTGAGTGGCTGCAGATTCAACGATAA CCGCCCaaaatgcaaaatttaaaaaaaatatttttaaaattttaaattac tataaaatCTGAACCACTAATAACTGCCCATTTATGAGTAACTACAGAAA ACAGAAGTAAAAAAGCTTATTTCTACAAAGATCtgtctttttgaaaatac aGCCTAGTATTTTCCTCCATTCCGGTCAAtttttttGGCATGTGAAAATG ACCCAAATaaaggaaaatttggaaaaaaatgtgcaAACTTCTTTGTATAC AAAGTCTCTATGTACCAAATTCATGCCAAAACAGTCTTGAGTTTGGGGGT TCCGGGAAGCCCCTCCCCGGGCAACACCAGACCCCAAATAACCCAGGGCA GATAGGGttaaagtgaaataaaaataataaaaatagctaaaaaataaaaa atagctgagtaactaaaaaaaatagaccttaaaataaatGTTGTATCTAC TCGTTTGTCgaacttaaataaaaaaagctaaataattgaaagtaaaagct aaaaacaaatcgaaaacagttgtcaaaactaaaaagccaactgaagaaca aaataaaacaacaataaGACCAAGAAGaataaattttccattttttagag ATATGTTGGCATTTGTTATGGTTCCCTTGGTTCAAAGACATTTGGACGAA TTCAAAGATCTCATTTGGAACCCCCACAGAATAAGACACCAAAGAGACAC ATACATGGCTGATGGAGTACCAAACCATATGTATGATTTTCCCGCCAAAT ACTCGATGGAACAATGTGGTATGTGCTTTTATtcacttttcagaaaaatt ataTTCTCTAGTATCCTTTAAGGGTACTCTTTTGTGTCTAATTGTAGGGG GGTTTAATAAGCGGAGGGGATGGGTGGTCTGGGaaaaaaaTCCacaaaat ggggggggggggtgacaaTAAAGTGATATTGGAGtgattttagtgatttt ccctaggaaaatgaaggtttttggcaCTTTTAGGCAATATCAAGTCAAAA AGTCGTAAAATGAgggggggTCATAATAAAGTGAGATTGGGggtgaaaaa tcagaaaaattacaaagtgaCCCCCCTACCTGCCCCTACAATTAGGGACA AAAGAGTACAAACTtttatagaaactttttttcgcggtttttggCCTAAC TGTAAAATTTATATGAGAAAAGTTATTGTGAAATAATCCATACACCCATA TCAAATCGgcaataactttttaaaatccCTTAACACAGTTTAACATTTCA CATTTTAGGAAAACCACTCAACAAAGACACACTTGATGAAGCTGTTCAAA TTACAGGAGTTATGGATTATGGAATTGACTTTCTTCTCCCAGATCAACGA AACCATTACCAGCAGTTCGTGAAAAATACTGTTACAGAATCTAATTATGT TCAAAGTTATCTAGATCTTAAATATAATCAAGCTTAGTATTTGTTTTACT AAATGAAATGTTATATAAA

Coding sequence (CDS) from alignment at sc0000081_pilon:958153..960471+

>MSTRG.11308.2.p3 ID=MSTRG.11308.2.p3|Name=MSTRG.11308.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=336bp|location=Sequence derived from alignment at sc0000081_pilon:958153..960471+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTTTTCGCTGGACGGGCATGATAAATTAATGGGTTACCAAAACTCGAC
ATTCCCCCTGGCAATTTATGGCTGTATAGACACAGCGAGTAGAAAGATAA
TGTTTCTCAAAGTCTGGGTTACGAACtcaaaaccacaagtgattggCCGA
TGGTATACTGAATTTCTACGTGAAAATCAAATTGTCCCAGAATATTTAAG
AATTGATAAGGGAACTGAGACCACGACCATGGCCGAGATTCACTGTCATC
TAAGACAAGAACATGGTGACTTAGAAGACTCGACATCATCAATTATATTT
GGCCCTTCGACATCTAATCAGGCATGTTATTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11308MSTRG.11308Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11308.2.p3MSTRG.11308.2.p3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11308.2.p3.exon1MSTRG.11308.2.p3.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11308.2.p3.exon2MSTRG.11308.2.p3.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11308.2.p3.exon3MSTRG.11308.2.p3.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081_pilongenomesc0000081_pilon:958153..960471 +