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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:532633..542902+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11281.1.p1 ID=MSTRG.11281.1.p1|Name=MSTRG.11281.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=10270bp|location=Sequence derived from alignment at sc0000081_pilon:532633..542902+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcaaaatggcgggACTTTTTGAGGAAAGAAGaggtaaacttttaaattt
tcattttattattttcttatagTTAGTCCCAAGGTTTTCGACTTGGTGAT
CAGTGTGTGACATGAAATTCTACtagcaaaaaggtctattatttttttat
aggtAGTTCCAAGGTTTTCGACTTGGTGATCAGTGTGTgacattttttct
atttctatttggttgagttgcaggaggctttgaggcctattttcgcaact
atagacgctttcaatgagcgccccgtcagcaccttggactgactacccaa
ttcccctcacatggcatgggttgacccgggcgaaggttcattcacttgcc
aagtgaaccgctgcgagtgggaatcgaacctcagtcgcctgtgtgtagta
accaaggtcaatgaccactaaaCCACATCGCCTTAAACATGAAATTCTAC
TAGCAAAAAGGTCTagcagtcaggcacatcctggcaaatgaacagggtga
gcatttgcatggggtattcgtcacccagtgtaaatgagataggcgtttct
caggctaaaagcgtgaaaatgaataaaaatgaacttcaaactgaaagagg
gaaaaaaggaagaaaactgggaactttattttttcgttaaaagtttcttc
aatcttcgaagacaaaattgacccatggaaaaaaaatttcatctatgcag
ttctttgaaatgaagcaaaatatttccaacccggttcaattgcgtGGGGT
ATTGAGTGCTATtgcatcacttttgttttcgaccccttgcaTTTGTCACC
aatcaaaagtgaaaaataccccgttcatttgccaggatgtgcctgactgt
ctaGTAACTAATAGATTATGTCAAGATAATAAAATAGAgctttaaattaa
aatttaaaaatttataaacgTTATATCCTacagtgtcaatcgaacaactt
caaacaaaaatcacaaTTGAACCCGAtcaaataattgcgattcgattgtc
gaacgtaatcaaatctcaatcgaacgaccgatttctgggtaatattcgat
tctgttcaattgcgtttgagtaaaggttagagattggttcgatagacctt
tttgctTTTCCATCCGCCATAGAATTGTCGTGGTataattcccttagaaa
gtaccttattggaactaattttcgcgggaattaattttagcattttttgc
ggtttttcatcaaaattgcaaaaattcttaggccacaaaaaatttcgaga
gttaaaacccgcaaaaattaattcccgggaaatacaattttttccaatta
attatcgaaaaatttgaaaaatccctaggaaaatgaaagaaatttgtcca
aaaaagggcaaaactgGGCATGCGTTTCatgtgttgtgtaaaattgctta
taatttggctgttttttttaattaaaaggattgcaatgtttactgaactt
ttagtttgatggatgaacttgtttgataagaatgataccaagaatttcat
tcaaggtttgttacgaccctcgacatggcccgagaattctcaggcctctt
cgggccatgttcgggccgagagaccctatcaattcttttggcccgaacat
gacccgagtcattcccATGTCAGGAGAttccatattttaaaaattgattc
agcatgtccagtcaaacaaaatagtacaaaataagatttgtctgttttgt
ttatatcgctcaaaaaaacttaacgagcttcccgtgggcacaatgaagta
taagcctgaagggttagaagtcaatctctttggtaggatttgaagccaac
aaatcctaccaaagttgcgcggccttgagcggctcgcctggtttttacac
aaatgacagattgaaactaaaatttaccgctaaatttcgaaaaaaatatc
aatcataaacaaaggaattgctagattcaatctgtcgtcaaaaatacggc
gcatttttcaAGGCTTCACTTTGgcttgaactctagcccttcgtgcttta
aactcaatgcgtggACACGCTTCACTTCAGTTTAAGACCatgaccagttt
actagcaaatatttccaccctaagtatatttataactatgttttcatacc
aaataagacatttaatatttatatgaatttacaacattcatatatttaaa
atataattaagagaaaccaagtttttctcaaagaaaatgttaaaaaaatt
cagtcctgaaattacacgcctgtttaaatcatgttttcaaaaattggccc
gagtgtggcccgcgtgtggcccgaattctcgggccatactcgggctttac
gtgaattccaataaaagttttggcccgagaattctcgagccatgtcgagg
gtcgtggtttgttttgattatattACAGATCAAGAACAAGTGGAAATTAG
GATACCTTCGGCCAATCTCTCCTAACTAGGAGAGTTGTATCCTAATTTGG
AGATTTAGGTATCCTAGATAGGAGAGCAGACACtttgacctgaatttttg
aGGTTACTGCTTTGATCAGCGTTTGGAAAACTATTCAAACCTTTTCTTCA
TCGAGATTTGCACcactgaccaaaatttcaagtaattttcgCGCGATTAA
AGCGTTGGCGTATGCTAGTTACCGCATTTGAGTGGTGTTTTGGGCTATAG
TTTTGCATTCCGCCAGCCAAACTCAATGAAATTCAGTACACAATCTCATT
TGCTTATTATTTACATATTGGAAGTGATAAGATTGCATGGATGTCTCTGG
TTGGTGAAAAATACGtcaggttttttggattttagtatcctaattaggat
gttgattgctattttggatacttttttgtaTCCATGTTAACATACTCTCA
TAAGTAGGAGAGATTGCTgaaggtatcctaatttgcacttaTTCTTGACT
GTTATATTAAAGTGTtttcttgtagaagaaagattaaatttgcttctctt
aaaaactaaaaataattacattcactcatctcttagaacaaccacttcaa
aagaccataacattagacataaactcaagctgaaaaatcaccagcgaagg
tagtcaaaaaacaatccttattcggctgacggcaaattattctcctggga
atagagctgccaaatgatcaaatcaaaacattgataatgtgtgacgtcat
aattactgctttcagtttgcgtgttttaaAAGTTCGATGTGTGTACTctg
tcttcgtggaattttttaatggcatgaaaacagaatatgctactgtgaga
tcgggtaacttgcatcagtggaggcaaacatgcatagccctcaaatgact
gacttgtctggtcattaaaatacaaagttagatcaaaacaaatataattg
aatacaatcgaacgtaattgaagcaattgaacggcaaatcctgggtaata
tttgattgcaaTTACGATTCAATTgcaattgcgattcgattgtgttcggc
AATCAAATTGCCAAATATTTGATAGTGTTCAATTGAGTTCAATTGATTCA
GCGTTCGATTCGTTTGATTGACACCATATGGTGTTAAACACTTTCAACAT
GCtcgctctaaagctctaaaataaCACGAAAACCAGAATATTATTTGTCT
aagggaatcaaaactataaagcaCTTACAAACTTCCATAttagtgtagct
ggaacctcgatattccaggattagaaaaagctctACCtattgtctttttt
ctttaaagaatcaacaagccatcaacatcgataaattacacacatttact
caGAAACTTTTGACATTATCTGCTATtatatgactttcttgaagccgttc
cgaaatgaaccaattggatatgtatcggaattcctatgggattGTAAAAT
AAGtcggaaaaaaacttttcccgggagTTTTAGGAAGAACAGAACTgcaa
tcatttattttttatttaaccagatatttaagTTTGGGCTTAAAAATAcc
taaataaataagttaataatattcaatatattatttgtctctcagaaaat
aaacacttgaattgaattgaattgaatatattttcgctgcaacacagcag
gataaccccttacaaaaaaaaatagatttctctaatacaatggggaacct
agaagaaactgaaaaattattacagaactaaagaacaaatgaataaacga
ttatcataatattaatagtgacacaaaataatgaatataagaaatatttt
tacttttattttatgaaaaatttctttgagtagttttatctataaagttc
ttcctgttacacgacccaccccctcccaccctgggaaaacacactaagct
catgcacacacaattacgcacacacacacacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacacacacaca
caaagattattcgttttcagttttgtatttgtctaaatagaattttgtag
ctaaagattttagttcatcagtatcaaggttgtgaaaatcagtgtcagga
tgatttattagtaactcattccattgttttgacgaaagacgagagaaaga
gttaagtccaaaatttgtggttttgaccgttgaaagttttagtagtttaa
tagctttgcccctggtgccagttttgtgatcaatttcatcaaaattaagt
gttgataggacatcagatggaagattaccctggaggtatttttgaataaa
taagatattcattactttcacctgatcaaagattttgagtaatttaagtt
cagcaaacaggggagtggcagaagttcttggttcactaaaggtcatgagt
cttagtgcagtgttttgaagagtaagaattctatgtgtgacagtattgtc
acacagtccccagagttgactagcatagcgaacatgagaagcaaaaattg
catgataaatgtttagaaggatgtgaattggaacatagtgacgaagtttg
gatattgccccatttgcccttctcaatgtagcagcaacgaaagaagtatg
aaccttccagtttagatgattgtcaaggtgaacacccaaatacttcacac
tcttacttggtgatagaattttcccgcaaagcttaattcttggaatacag
tccatctgtctccaaggggaacgaaaaataacaaactcagttttgctagc
attcaaagaaattttgttggcattaagccagctgactaaaactctgagat
cagcattaaccctcccacaaagactccatacagtttttgaaaaaatttag
taaatgagtatcatcagcaaaatgatatgtttcagaggttcttatacagc
ggtgaagatcgtttatatacaacaagaacagcagaggacccaagactgaa
ccctgaggaactccatgattaatagattttaaaagggaatttgagcctga
aagagaaacatactgggagcggttagtgaggtaagatcggaaccagtcat
taacaatgcctctgactccgtagtgatcaagtttttcaagtaagatttcg
tgatcaactgtgtcgaaagccttttgtagatcgacaaatacaccacaggc
aaacccaccattgtcaagatagtttcggatacgttcgacaatattaatga
gtgtatgctcagtagagtgagccttacgaaaaccaaattgtcgagagtag
atttgattatggttttcaagaaaatcagaaagACGTGAGTacatcacttt
ctcaaaaattttttcaatgttagataagagtgaaattggcctataattag
agacttcaaggggagaacctttgtgtttgaagacaggcacaactttggat
attttgagagtagagggaaaaaataccactgagaaaggagtagtttatca
gcgccgatattggcacagaaatatcaagtcttaaaagtttaaggattttt
ataggaatactatgaggaccacttgctttatttaatgagaaagagccaat
caccTTCGCAATTTCTTGATTAGTGGTTGGTGCTAAGAGGATGGAATGCA
GATTTGGATCTTTCATGAAACTGCTGAAGTGATTGTAAGAAGGCGGCATT
TTTTCACGAATAGAATCAGCTATAGTAGTGAAGAAATCATTGAAGGAATT
GGCTACTTTCTCAGGATCTGATGTCAAAGAGTCACCTGTGATGATTGAAA
TGGGTGATTCTGAGTTAGCCCTTGTTGAGATTATATCGCGAACACCAGAC
CCGACACCAGACCAGACTTTTCTAGAGTTTTtagaatggaaatcaaaata
tctgatgTAGTGGttttttttACTACGTCTAGTCAAAGTGACTATCATAT
TTCGATACCTACGATATAATTCATAGAGTCGATCTTTGGACTCCTTAGTT
TTAGCCTTAGCGTGTTTTTGTTTGGTAGtggtcacgtttttttattgact
tcaaaaattCCTGGCGTTAtccatggttttgtttttgatctaaCTTGACG
TTTGGTAAGTTTGACTGTGGGTAGATGTCTCTCTACAAGTACTTTCATTC
tgtcattaaaaatattgaaacaggaGTCTGGATTATgaccaaatctcaaa
aaaagggTGTCCCAATCAACTTCAAGAAAATCCAGAATAAATTCTTCTCG
GTTGAAACGAGACCAGTCTTgctgaaaaaaagtattatctTCACCGGGAA
ACTTACCTTCAAATGATGGAAAGAGACAAAACTGGGGGAGATGATCTGAT
ATGGAAAAGCATATGTTGCCAGATACAGTTCCATTATCAGATGGGCTAGA
AATAATATTATCAATGAGAGTCCTTGAGTCCTCAGTTATTCTTGTTGGTA
AAAGGATCTGTGGAAGTATAAGATTAGAATCGAGGATATCCATGAAGGAC
ATTATTTCTGAATCATCCTCGCATTTCAAAAGATTAAGATTGAAGTCTCC
AAGAAGGAGGAGttacttacagaacgacatcgtttatcatttggaatacc
cccgtatttggaccattctattgtgggcccaaaatagggcggaaactaag
tagcaccttcagtgcaagattgccgcctcatctttattcgcccacgcgag
aatgcgagctaatcattttttctcgcgtgctcaaggggaaaaggaaagtg
gtcgatattctttgaaggaaaaacgtcagaaacaaacccaaagaccaaaa
gatgtattttgttgttaagaatcgatcctgtgaagatgaaaaaatttctg
ctttgcgctgaaaaactctaatttcgatcttcctttaaggtaaagaggtt
gcgagatttgggttagcaaggcaaaaattgctaaaaagctggtaaaatcg
taatcctcaaaaatcgaagtttcAGCTTCACTGTACACTGAATATGTtgg
atctaacaaaattaataacgacactgtcatcattgacaataaaacaaagg
attttctgtcaaaagTCTTGTAagcattccaacaacttccatcgaaatga
tctgtcagagctaagtctaccatttttagcgcagtccgaggattgagccg
agaacgctagCAGAACGACCGCGAACTCCTGCGAACTCCCTCGCAGGTGA
AAAactctgtcaatcattttctcaagcaaagacTATGCAAAgagattggg
ctcttccagaaaaaaaccattcatggggggtggggaggatatattgtcca
ggggtattgaaaaaaccctgaaaaactgccatgtccatggggtgaatctg
atgtccaggggtaaatatttgtgtccagggggtcaatttgatgcttgtcc
aggggtgaatcacgtgtccagggggtgaaaaatcgaaatgtccaggggta
gatcaaagacaaaataatatatcctccacccaccatgaacgaattttttc
tggaagagcccattctagctttacgatagtgctgcggatcatcagtggat
agtaatCAATTATCAAACTTGGTTTGACATTTTACAAATGagtgagtttg
aaattttgactgccATCCCTACCTTATTAGCGTACACTTGCCTAATTCCG
AAtggttttcaatgttttcaatcaaatttcaagcacaaattatcaaatga
aaaagtttttgtgaacagaacaaaattcaacctttcccctaacaaaaatt
tcaaataatattcCATTTACCGCTAAATAAatgtaaaacaaaaacatgaa
GCTCTCAAACGTTCCTTATTACAGACATTCGTCCCTTATCCCGGACGACG
TCTCTTTTCTATAAAATCTAGCAAACTTCCACTTGAAATCTTTCTTGAAA
GTTGAAATAGAGAGCTGTAGGTAAGGTGTCCGGAATTAGGCACTGTCCGC
AATTAGGCAAGTGAACGctaagtggattaaattttgcatggatcaatgtt
tttttgccaaaaccccCTGGCAAAATGAAAGGAATTAGGTATAAAAGAGC
CTGATTTGCGTACAACTGTCTTAAagtgttttaaaaaatatttgtggTTG
GCTATACTGGGACCGCTAGTGCTGCCAAGCTACTAtttttttGCTGGGCa
cagtttttttatcaatgattGTCATTGTCAATGATTGTTTTTCCTATTTG
GCCTTAGCAATATTGCTAGTTTGATTTAACAGTATTTTTAACTgtatata
tataatattatcCGTTAGATTTTGTCATGGTAAATGAGtcaaaattttat
tctttttttcgtAGGTAAATAATTAAAACATACACAATAGTAGGTAGGTC
AATACAATGGCAACTCAAACGGCTGTATTAGATCTAGGAGCAAGTACTTG
TAAATTTGGCTTGTCAACTGATGCAGACCCAAGAGTCATTCCAAATTGTA
TTTCCAAAGCTAAAAATGAAAGACGAAAAGTCTTCTACGGGGATCAGCTG
AGTGATTGTAAAGATTTTTCTGGATTGTTTTATGTGTTACCCTTCCAGAA
AGGTTATTTAGTAAATTGGGATGTTCAGCGTCAACTTTTTGATTACATGT
TTTCAAAAGAGAATCTCAAAGTGGATGTGACAGAAACCAATTTAGTTTAC
ACAGAGcctatttttaattttacatCCATAAAAGAGTGTTTGGATGAGAT
TTTCTTTGAAGAACATCAGTTTAAAGCTGTCTGTCGTAAAAGAACTGCTG
AACTTGCAAATTTCAAACATGCTGCTGAATCAGCAAAGAATCCCCTGTGT
AGTCTAATTGTAGACTCTGGGTTTTCCTTCACACATATTTTGCCGGTCTG
CCAAGGTCAGATTCTGAAGAGGTCTGCACGTAGAATTGATGTTGGTGGTA
AAGTGATGACAAATTATTTGAAAGAGATTATCTCTTATCGTCAGCTTCAT
GTGTTGGATGAAACATATGTTATGAATCAGGTGAAAGAGGATTGTTGTTT
TGTTTCCACTGATTTTAACCATGACATGGAGACTACAAAACAGAAAAGGA
AATTAAACACCATTGCTAGGGACTACATATTACCAGACTATACCAACGTC
AAACGTGGTTACATAAGACCAATTGAAGAAATGTGGACCAAATTCACAGG
TACAGAGCAATTACTGAAAATGAACAATGAGCGTTTCACTGTACCTGAAT
TACTTTTCAATCCATCAGATGTTGGTATACAGCAAATGGGAATACCAGAG
GCTATTCACCATTCTATCCAAACAACTGAAGTCCTTCAGCAGCCTCATTT
CTATCAAAATATCATCCTTATTGGAGGCAATGCTGCAATACCTGGTTATC
ACAAACGTGTCACGTCTGATGTCCGCAAATTATGTCCAGATGTTTTTGAT
TTGGATATTCTTTGTCCTGATAATCCAGCCACTTATGCATGGCAAGGAGG
TGTGACATTGTCCAAAACTGCGgattttgtttcgaaatattGTATCACTA
AAGCAGAGTATGAAGAATCAGGGAAAAATATTtgctttcaaaaatttgat
aagTAGCTTTATTCATTGTAAAGGAGATACgactttgttgattttgaaaa
cttaatAGAACTTTGTTTTTCCTTATAATAGTGTTACTTGTTTTAGATTG
GTCTGTCAAACtttgtaattttagcatagatttatgtttattaattaata
attacttattttttctatttacattttaagcattattgctttcttataat
ttGGGCCAAACATTAGGATCTGTAACATCTTTATAGGAGACAATCAAATA
AGtgaggggggagggggggcTTCCACAGTCTGGCAAAAACCATTTTGCCC
AAAGTCTAAAGTTACAGTCAAAACTGTATAAGCAAGAAGCAGAAGTagtc
tttttcaacaaaaaaaaaac Coding sequence (CDS) from alignment at sc0000081_pilon:532633..542902+ >MSTRG.11281.1.p1 ID=MSTRG.11281.1.p1|Name=MSTRG.11281.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000081_pilon:532633..542902+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACTCAAACGGCTGTATTAGATCTAGGAGCAAGTACTTGTAAATT
TGGCTTGTCAACTGATGCAGACCCAAGAGTCATTCCAAATTGTATTTCCA
AAGCTAAAAATGAAAGACGAAAAGTCTTCTACGGGGATCAGCTGAGTGAT
TGTAAAGATTTTTCTGGATTGTTTTATGTGTTACCCTTCCAGAAAGGTTA
TTTAGTAAATTGGGATGTTCAGCGTCAACTTTTTGATTACATGTTTTCAA
AAGAGAATCTCAAAGTGGATGTGACAGAAACCAATTTAGTTTACACAGAG
cctatttttaattttacatCCATAAAAGAGTGTTTGGATGAGATTTTCTT
TGAAGAACATCAGTTTAAAGCTGTCTGTCGTAAAAGAACTGCTGAACTTG
CAAATTTCAAACATGCTGCTGAATCAGCAAAGAATCCCCTGTGTAGTCTA
ATTGTAGACTCTGGGTTTTCCTTCACACATATTTTGCCGGTCTGCCAAGG
TCAGATTCTGAAGAGGTCTGCACGTAGAATTGATGTTGGTGGTAAAGTGA
TGACAAATTATTTGAAAGAGATTATCTCTTATCGTCAGCTTCATGTGTTG
GATGAAACATATGTTATGAATCAGGTGAAAGAGGATTGTTGTTTTGTTTC
CACTGATTTTAACCATGACATGGAGACTACAAAACAGAAAAGGAAATTAA
ACACCATTGCTAGGGACTACATATTACCAGACTATACCAACGTCAAACGT
GGTTACATAAGACCAATTGAAGAAATGTGGACCAAATTCACAGGTACAGA
GCAATTACTGAAAATGAACAATGAGCGTTTCACTGTACCTGAATTACTTT
TCAATCCATCAGATGTTGGTATACAGCAAATGGGAATACCAGAGGCTATT
CACCATTCTATCCAAACAACTGAAGTCCTTCAGCAGCCTCATTTCTATCA
AAATATCATCCTTATTGGAGGCAATGCTGCAATACCTGGTTATCACAAAC
GTGTCACGTCTGATGTCCGCAAATTATGTCCAGATGTTTTTGATTTGGAT
ATTCTTTGTCCTGATAATCCAGCCACTTATGCATGGCAAGGAGGTGTGAC
ATTGTCCAAAACTGCGgattttgtttcgaaatattGTATCACTAAAGCAG
AGTATGAAGAATCAGGGAAAAATATTtgctttcaaaaatttgataagTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:532633..542902 + |
|
