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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:465351..470757+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11278.2.p1 ID=MSTRG.11278.2.p1|Name=MSTRG.11278.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5407bp|location=Sequence derived from alignment at sc0000081_pilon:465351..470757+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaaggtaccctgaccagcggagcatccccgtaacccatcttgcccta
gtaccccccccggggattTTCTTTAAAACCACAAGACCAAACAAGAAATT
AGATCATAAACTGCAGAAATTAAATCAGGCTCagaatatttattttactt
CCTACGAAGGATTGATAGCTTGAAAGTTATGGCTGTAAAGTAAACAAGAA
GgaagaaatcgaaagtaaacaaaaaaaaaaaaaaaaacagagaaaatgGA
TGGCATCTTTGGGAGAGTATTTGGCCCATGTTTTAGGGGATGGATTCAAC
CAGAGCAAACAAACGGAAATAAGTATATTGATTATGCACCAAATAGGAAG
TGGTAAGTTATGTCTGGTTGGTCTGATCGTTTGTCTTGTATCATTGTCTT
TCTTCCCCACCACCCACCACATGTCTGCAGTCTCCagaaattcattttca
aattttcaacttttagtaCCTTCTGATCTGTGATTTGTCCTTGAAATTGA
TGCTACTTAAAAAGCTTGACAGCTCAGTGAAAGTTATAGTTATAGACATT
TTGTGGGTCAAGTTTcaatcaaaataacttttatttgtctgtttgaagaa
aaatgattttaacaAGTTTAGTCATCACTCACctttttgtttctgttttg
TGTTATTGTTAGAGTAATCACATCAACTAGTTTTGATTTTGTAGGAAATA
TGATGACAAGAATTTGATCAAAGAACTCACTAAAGATCAAGTCAACTCCT
GGGATGTCATGGATCTAAATGGTgagtgaattttatttttttcagtttta
gtCGATAATAAATCAAGAAGGAAGACTGTACGTTGCTGTTCTACCTTTAT
TGGATTTAGTTTTGAAGAGACATTTTGAGGTCAAAATATATTAAACAaag
gttttttcaaagtttttgtgCAACTGGGAAATTGATCGTATATATTGGGG
ACCGTTaccaaaaatgttttcctttttttaaccgTTCAACTGTTTAAACA
GGAGAGAGGGAGGCTGGTgatcaagaaaaaaagaaatccaGATCATTGGA
AGAAAAGCTTTAAAATACTAGGAATTTTCACCAATCCACCACTTTGCTAT
ACTTTCACGATCGTGAAGAAATGTTTTGTCCCACAACTAAAATTCACAAA
TTTTCCTCTCTGCCCTCATAATAAGACCTTTTCTTTTCCTAATATATAGT
CATTTAGGAGAACACAACAGTCTATTTTAACAAGTTAATCCAGCCAGTAC
AAACAGAATAAATCATCTTGTACTTAGGAGTTGTGTTGTAATTGATATTA
CGTTACCATTAAACAAATTTCTGCTGGAGTCATTCAAAAGAACGCTGCGT
TCCCCCAAGCAACTATCGTAATGTAATGTCATGTTGAACGGTTATAATAT
ACTGCAGTAATTAAGACAACATAAAACACCGACGTATGATTAATAAAAGT
TTGTACTACTGTAAATTTCATATATATAGATACAAACACAGGAACGAAAG
AGCAGTTATtggattttaaaataattttggcgcaaattcatcaaaataac
ctttttttataattttcaaaaatccaccTCTAATTAACTAACTAGACAGG
AGAACttgtctttttatttaaaaatctgatgtatactTGACGGGTCGGAG
CTGTGAGTCCATTTTTagactcaaaaacaaaatagctCATTTTCTTGCTG
GACTCACttgctgaagaaaaaagttttataattttaaaaagtttttccga
aagTGAGCGTAGTAAACCCCGGCACAAAGAAACGTTTTGATTGGCAGATT
CTTATCAAAATATCAGCCCCGACCATGCTtttcatttcgccatcagtata
taaataagaaatcatagcatggatctccaggagTGCTAATTAACTTACAA
AAAGGCTCATTTATGAGGCCCCCAGcagtttgcgtgatggcgtgattggg
acttttttcttgcgtgatggcgtgattagagattttttttggcatgatgg
cgtgatcaagatttcggcgtgatgcgtgatagggcaaaaatttgaggcgt
gatgcgtgatttgggctatttttgctattttttgtgtgatgacaaatttt
ggcgatttttgtgatgcgtgatggagaataTCTTTTTGCATGATgtcgtg
attaggggtgccgctgggggagCCTCATTTATAGCTCtccttgaaataaa
aaaaatgtgttactgtacttgccaaaataagttttgctagaatttaaaaa
tttagttTCCTTAAAAGCTTTATgctttgttcttttaaaaaagacaAGGC
ATATTCTGTATTAGGCTATGTACATCCCCAagattgattttgatatatgG
GATGCGTATGGTGTATAATATTCACGTCCAAGAGTTAGCCCAGTTGgggt
aacctgtttcaatttaTAGTGAGTCCAGAAGATTGACAATTTCACATATT
CAAGTTATGGTGTAATAATTGTCTGTGATTTAATTTTTGCTCTgcttttt
ttactaaaaacAaaATTGCAATGACAATATACTccacaaaaacacaaaga
caAGGTAACCCTCCAGACATGATATGCATCCATAGGGGATGTCATCAAAA
CATATCCTAGAGAGAATGTGAAATAATTGTGATGTGAAAAGTAAAACCTG
TCTTGAATATTAAGGGATCTATGTAAAACGTTAGTATAAGCAAACTTGTT
TTACCACTATGAATTAGGGAGCTCAGATCAATGTTGTCATTTAATAAGAA
GTTGTTTTCTGTGCAATTCACAGCAGGAATTATTTGCAATCAACAAAATA
AGGGTTTTTAAAAAGATAACTTGTTATAATACTTGGTTATCCTTTTAATG
ATTCTTCATAGtcaattatttgaaaattttcaagtttattgTTTTTTCCT
AATGAGAATGCCATTAACAATAAAAAACTAGCTTCTATAGATCTTGGTAA
TAATTTTTCTGGCCTTTGATAATAAAactgttttattgaaaataggTTAT
TGTTTACCAAATTTGTTTACAACTTAGCTAATTATAGTTTAGATCTCTTT
GGAAATACTTCAAGTTTAAACCCTTTACAACAACATGGTCATGCCAGTGt
ataattggaaaaataaatattaaaattttgttgaaattcaattatttcaa
aaatattttttagaagaTGAAGATTTAGATGTTAAAATTGCTTCCAATGG
GAAATTACAACTTCATGACAATGTCTTCATAAAGTAAGTTACAAATTACA
CTAGCTTTTTGAACTGCTAattctacacgcttttttataagaaccagtaa
gttTTGGTATAGGCTGAACTGATcttaatctttttaatttttcatgcaTA
AAAAGTTCTTACGACGTTGATATGCTTAGCTATCACATGGtagatataaa
ataaaatttattaaaacttATGAATTTACTTTTGACTATTTTTGCATCTT
TATCAGTCCACTCAGTACCAATGAAGAGGACAACAACAATGCCAACAAAG
AGAAGGATGAAGCAGAAACAAGAGATGGTGTAACTGGCGAAGTCAACCCC
GTGAATGAAGAGTCAGAACAATCATTACAGAATGCATCTTCTATTGAGGA
AGATGTTACATCAAATAATAAAGGCACTAGTGAAAATGATGGAGGGACCA
CTGATGTTGAATCTTCAATAGAGATGACTGTTAATGCTAAAGGTGGGTCA
GAGGATATCTCTTCAGGGAGTTCTGCTGAAGAAGCAGTTGTCATTGATGA
GGAAGTGAAACTAGTTGTCGAGGAAAAGGAAGAACCTGAATAGAGCTTAG
ACAAATTATGATACTCTACATATCTGATTAAAGTTCTAAGGTTTTTGTTG
GATACAGATTGGCAAAATGATATTGGGGTTGTTAAGATTTTGAGGAGGTT
GTTTCTCGAAATGATGTGAAGCCTCCTTCTTCATGTGATTGTTCCAGCTT
GTTCTGCTGCCCTATAAATGAGAATTAAAGTctaacttttcaaaataaat
aaacagacGATTGAAACCTTTAAAACAGATGCGAAGAATGAGGCACATGG
TGACAATAATCAAGGTTTTAAACAATTAAGTGTCAAATACTGAGACGCTC
TATTTATTGGTTATGTAAGATTGAAGAAACTAGTTTAAATCAACAGTATA
GTAAATTTTAGACTAAAATAATCTACCTtattggaagaaattttggcggg
aatttaatttggcggatggtcaaaaaagctttttcagagggaatttaatt
tggcaaattgctgaaaaattaaatttggtaggaatttaatttggcggatg
aacgATATTCTTGTCAAAAAACGCCATTGAATAAGAAAAACCTGCgtaag
gcctgaaatagcacacattttgggggaataaatatagtaatttaaatttg
gcggatggtggaAAAATTAAGTTTGGCAGATTTTGACCaattccgccaaa
ttttctttccgccaaaattttttcGCTAAAGGTATTATTTATTGCAAGAA
GAGCCTTCAAAAGGCtttttttcttggtggttatatttttcattattttt
attggaaggaatatattattatcaattatttttttacacaaTGATACCAG
TAAATTAatctgaaattaaatttttccagTACCGATCCCTATTAAGACAA
TTTGTGTACTATGTCTTAGaattatattttgcaatttattattttgctat
aatttaataacaattattgattatGGTATAGAGTATTTATATCGTTTTGG
TGTGGTTGGGAATGTCAGTATTTATTCATTGATTTTGATGCAAAAAGGGA
CACAAAAGATGCAgtgggatacaaaatcaaacggTCACATAAAttgtcaa
aacaaaattaatatagccgactttgaatttttctattaaGTATTATATTG
CAAGTTTGTTTAGAGGCTTGATTTATGAAACTTATTGTTTAAATTTTAGT
ACTCTTATGTTCTAATTGACACAATTGTCTATCATAAAACGACTGTACAT
TAAGCCAAAAGTTATGCCTATATcacgaaattttgaaatgtttcccagtt
tAACTCTAAAGTTTTGGTAGTTTTCCCTAATTTTACAGCCTCATTTTTCC
CAGCGTACTATCTTTCTGGTTGACCGGTAGATTGAATACCATTTGTTTTG
TCAAACTTTTTAACAGTTTAGAATGATATTTAGAAAAAGAggaatttctt
tgttttgtatataatattgacctggaattttttgtttatttgtttgtttg
ttatttttttagtatttatttgtttctttcatTAAGTAATATCTGTATAT
ATTGCAACAATTTtaggttttgaaaatattacaatAATAAATTGAATCTC
GAAATTTTAATTAAGCAGAAATAATATAATTCTTCTCACGATATATTTAA
Gataaaa Coding sequence (CDS) from alignment at sc0000081_pilon:465351..470757+ >MSTRG.11278.2.p1 ID=MSTRG.11278.2.p1|Name=MSTRG.11278.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2352bp|location=Sequence derived from alignment at sc0000081_pilon:465351..470757+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATGGCATCTTTGGGAGAGTATTTGGCCCATGTTTTAGGGGATGGAT
TCAACCAGAGCAAACAAACGGAAATAAGTATATTGATTATGCACCAAATA
GGAAGTGGAAATATGATGACAAGAATTTGATCAAAGAACTCACTAAAGAT
CAAGTCAACTCCTGGGATGTCATGGATCTAAATGaTGAAGATTTAGATGT
TAAAATTGCTTCCAATGGGAAATTACAACTTCATGACAATGTCTTCATAA
ATCCACTCAGTACCAATGAAGAGGACAACAACAATGCCAACAAAGAGAAG
GATGAAGCAGAAACAAGAGATGGTGTAACTGGCGAAGTCAACCCCGTGAA
TGAAGAGTCAGAACAATCATTACAGAATGCATCTTCTATTGAGGAAGATG
TTACATCAAATAATAAAGGCACTAGTGAAAATGATGGAGGGACCACTGAT
GTTGAATCTTCAATAGAGATGACTGTTAATGCTAAAGGTGGGTCAGAGGA
TATCTCTTCAGGGAGTTCTGCTGAAGAAGCAGTTGTCATTGATGAGGAAG
TGAAACTAGTTGTCGAGGAAAAGGAAGAACCTGAATAGatgGATGGCATC
TTTGGGAGAGTATTTGGCCCATGTTTTAGGGGATGGATTCAACCAGAGCA
AACAAACGGAAATAAGTATATTGATTATGCACCAAATAGGAAGTGGAAAT
ATGATGACAAGAATTTGATCAAAGAACTCACTAAAGATCAAGTCAACTCC
TGGGATGTCATGGATCTAAATGaTGAAGATTTAGATGTTAAAATTGCTTC
CAATGGGAAATTACAACTTCATGACAATGTCTTCATAAATCCACTCAGTA
CCAATGAAGAGGACAACAACAATGCCAACAAAGAGAAGGATGAAGCAGAA
ACAAGAGATGGTGTAACTGGCGAAGTCAACCCCGTGAATGAAGAGTCAGA
ACAATCATTACAGAATGCATCTTCTATTGAGGAAGATGTTACATCAAATA
ATAAAGGCACTAGTGAAAATGATGGAGGGACCACTGATGTTGAATCTTCA
ATAGAGATGACTGTTAATGCTAAAGGTGGGTCAGAGGATATCTCTTCAGG
GAGTTCTGCTGAAGAAGCAGTTGTCATTGATGAGGAAGTGAAACTAGTTG
TCGAGGAAAAGGAAGAACCTGAATAGatgGATGGCATCTTTGGGAGAGTA
TTTGGCCCATGTTTTAGGGGATGGATTCAACCAGAGCAAACAAACGGAAA
TAAGTATATTGATTATGCACCAAATAGGAAGTGGAAATATGATGACAAGA
ATTTGATCAAAGAACTCACTAAAGATCAAGTCAACTCCTGGGATGTCATG
GATCTAAATGaTGAAGATTTAGATGTTAAAATTGCTTCCAATGGGAAATT
ACAACTTCATGACAATGTCTTCATAAATCCACTCAGTACCAATGAAGAGG
ACAACAACAATGCCAACAAAGAGAAGGATGAAGCAGAAACAAGAGATGGT
GTAACTGGCGAAGTCAACCCCGTGAATGAAGAGTCAGAACAATCATTACA
GAATGCATCTTCTATTGAGGAAGATGTTACATCAAATAATAAAGGCACTA
GTGAAAATGATGGAGGGACCACTGATGTTGAATCTTCAATAGAGATGACT
GTTAATGCTAAAGGTGGGTCAGAGGATATCTCTTCAGGGAGTTCTGCTGA
AGAAGCAGTTGTCATTGATGAGGAAGTGAAACTAGTTGTCGAGGAAAAGG
AAGAACCTGAATAGatgGATGGCATCTTTGGGAGAGTATTTGGCCCATGT
TTTAGGGGATGGATTCAACCAGAGCAAACAAACGGAAATAAGTATATTGA
TTATGCACCAAATAGGAAGTGGAAATATGATGACAAGAATTTGATCAAAG
AACTCACTAAAGATCAAGTCAACTCCTGGGATGTCATGGATCTAAATGaT
GAAGATTTAGATGTTAAAATTGCTTCCAATGGGAAATTACAACTTCATGA
CAATGTCTTCATAAATCCACTCAGTACCAATGAAGAGGACAACAACAATG
CCAACAAAGAGAAGGATGAAGCAGAAACAAGAGATGGTGTAACTGGCGAA
GTCAACCCCGTGAATGAAGAGTCAGAACAATCATTACAGAATGCATCTTC
TATTGAGGAAGATGTTACATCAAATAATAAAGGCACTAGTGAAAATGATG
GAGGGACCACTGATGTTGAATCTTCAATAGAGATGACTGTTAATGCTAAA
GGTGGGTCAGAGGATATCTCTTCAGGGAGTTCTGCTGAAGAAGCAGTTGT
CATTGATGAGGAAGTGAAACTAGTTGTCGAGGAAAAGGAAGAACCTGAAT
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:465351..470757 + |
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