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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:419283..427333+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11273.1.p1 ID=MSTRG.11273.1.p1|Name=MSTRG.11273.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8051bp|location=Sequence derived from alignment at sc0000081_pilon:419283..427333+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCGATATGTACAGGAGTCTTTGTGAGCCGGTCgaataattattttgagt
gattttaacaatttttgtttcttttgattcGTTTTCTGAAACACTTGCTT
GCCAAATATATTtggaaaagaatttgaaattggcaaaatgacttgataat
attgaaaaattgagaTTCTAAACGTGTAGAGACGAATTTTGAAACGTAAA
AGTGACTCTACATTTTGGTTTTGACTTTTGTTCGTAGACATCAGGGATAA
CTTGTTGGTATcagaaatttaatttaaaaataacaGCAATAGTTAATTTA
AAAGGATCGCCAAGATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCA
CGAATTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGA
GAAAGCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGA
AAGAAGTTCGGGCTGAAAGGGTAATTTTCATTACTTTCCCCttttttttG
CAGTATAGTCGATTGGAATTCTTTTTACTCAGTGGAGGTAGGTGATGCTT
GTTGCTAGGGCGTTTTCCTATCAAGAGTAATTTCAAGGCTAGATTATCTA
GTCTGGACAGGGTCCTATTTGGTGTTTTATACAGAGATGCCATTACCTTA
GGTTTTATTCTTTCGGTTTTCAACATAGAATGTACAAGTTTGTACGAATT
TTCACCTTGACGATTAAAACATGGATAACCTGAAAAGACCCAATAATTGc
acaatttctatcattttcaaAGGACCCGCTGCATCCAACTCTTTTTGAAC
TTGTCATCAATGTGGGTCGTTCTATGAAATACTGTTATTTCTTTGTAAac
atattatttttcatttcttcaaaGGGCAGTTTCCGACCGGGAGATTTTCT
GTCTCTTTTAAACCAGAACTAGTCCCTGGGGGTGTTAGATAAGCAGACAG
CATGCGTGCACAAGACTCATTTCTTCCAGAACCTTACCATGGAatctttt
tgaccaatcaaaaACCAGGCTAGTGTCAATATAGTCAATAAGCCGATTTA
CCAAACTTCTGAATATTAATTGCCTGTAATTTCCACTCGCTAACATCTAA
TAGAACACATATTTATTTCTACAGCAAGACGCACTGGAACGTAAAGAATA
TAAACTAGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGG
ATGCAATCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATC
GGCAGAGAAGAACAAAAGTTGAATGACACGTTaaaaaaaCAATCGGAGTT
GCAAGCAAACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAAC
AGATTCTCGCCTTCCAAGAGAAAGAATCGAAGTAAGGCTACTTTCGATTT
CCACACCAACCTCATACCAATGCTGTGCTTTAACACTTCGTTAGGTCAAA
TTGCCGGTAATACTTCAAATAGGCATAACTTATGATGCAATAAGCTTTTA
TGCAGTAACCGTTGCTTACACAAACCTACATAAAACTCTGCCCTAATTTG
AGGATTTTGAAGCAGAACCCATTGACCACAGGAGCCTTTaatctgaaaga
aaattttttcaaggaaaatccaCAATTTGCTATTTTCATCTGATCGAAGA
GACGGAGTGTCCTTGGACTAAAACTAAATTTAATACCTACCATGCTATCA
TTCTATTTTCTGGCCTGTTTCTTATCTTGCGTTTTATGTTCCATTTTTAG
GTACCGTGAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTG
CAAGAGGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGGACAATATC
AAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTACGTGAAAT
GGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGA
AGATCACAAGTAAAGAGAATGAAATCAGGTAATGGCTAGCCCCTCGTTTC
TTTCTGTTAGTGTTGAAATTTCTGGTAGAAAttaaatacacccccttctc
acagacccgcgggatttttttcagccagtgatAGGATAGaaatactcttg
tctcccgaatagacggggggtccgaataagcagggggtaggaaaattttc
taaattctaataagcggggggatggaataagagggggtaGTTTGAAGAAA
GATTATTTTCTaactggtatcaatttcaacaagaaaaaagaaactttaat
aaataaacacgtaaaataagaaccaatactaacaaaaaggaaaactttaa
caagtttaaggtctatctacactgtaataaaatattgaattattcgaatt
taattagcgggggggtcttaataagagcggggggatggatttttttgtct
cttaacaattagcgggggggacgtctattcgggagacaagagtagaggac
caaaactcgatggggattgatattcccatgttttcttatggctggggatt
taaattctattGCTTTCGAGCCAGAAAACTCAGTGAAGACggaaaaaata
atacaataatttGCAGTGTGGATTAGCTTATCTGAATATTTTCAGTGGGG
GACAAATATTagtgtataattttccactggggacgatattttggccaatt
tctccAGTGGGAAGGGCCGGGAAggggtctgtaagaaggggaTGTTTATA
TTGATGCTTCGTTTGAATCTGCGAATGATTTTCTAAGTTCTATTACTTGT
ACAAATGTTTGTGACCTGAAACGAGCAAGCATTTTTCGCGAAGTTTGGCC
TTTTTCACGAGCCTTTATATactttttgcccccgcaggagcgtagcgacg
aggaggcactcatagtttcacgcatagatattggactgaaCTCTCGAAAA
TTGTTGTcttgtcgcgcaagcatccccgtagttagtctcttccgtaaatg
ttcggtttttttccgggacggtagtatacatattttcatattacgttata
tggtattatcattattacatattacaattttagttttgatttagctttga
aaagctgaagcgagtgttataaatgcaaatcaaaacagtgtatgatataa
cacgaattacaatattacttgtgcaaatcaaaacaaacaaaatggcagac
tggttatgatgatgatgagctgattcattgactagaaaaagtgttttgta
tgtcaaattttgtttcttgtctttgaaactgaatactaactactgtaatt
tagtcagaagttcacttcagcaatgatttcgatagatcttttttcaaaga
ggccaccctgttgaataattatgtagtccagcagaaaaacaatgataaaa
ccatgcataattattacaatatgcatgatacattAATTacgcatggctct
atcattgtttttatggctagAGTAcctaattattcaacaggacgtcctct
ttgaaaaaaggtctattctttttccggaatctttaatgaaatttgcttaa
gttttcaaatgtatatttgatatttttgttcaaaccaGTTCAAactctaa
agtctattcacgataagtgtgcactcttttttcatttacccataactttt
gaaggaattcttcaatctttataaatttggtatcattggaaagatattag
tgagtggatcaatttgaaataaaaaaatctttaaacaaattctaaaaatg
aagatgaaaatgaagaagaaaaaaatgaagatcttgtagaaaggtgctat
aactatcattttcactgaagtgaatccttggttatcgaacatcatcactg
tgaagaaatttctcaaaaataatcattgaatcaaaagatatcaagcaaag
ttataagctgattgacgtctaaaaacgctgttttctgctgttttctgctg
ttttttggggtcactcacttattaactttgtatcataactttatattgaa
taaatattttagtgaaatttcttcacagtgatgatttcctaagatcaaag
aatctctccagtgaaaatgaaagttatagcacttctctacaagatcttca
tttttttcttcttcattttcaccttcgtttttagaactttttcaaagact
tttttatttcaaattgttccactcaaaaatatctctccaacgataccaaa
tttataaagattgaagaattccttcaaaagttataggtaaaagaaaaaag
agtgcacacttatcgtgaacagactttaatttatttttgtctgtcatttt
attgataactacctttattgtttatagggcttcttgagctttaaatacca
tcacatggtcgtaactcgagaaagtccttctgaacttagtaaaacaaccg
gcaaagtacaaaaaagttgaatgtgcgcatatgtaaagttgaatctaaac
gtggttgactttttcttttgttcttcaaaataatttacctcacttagagt
gtttttacgtcttttcagtgcggtaaatctttttcaaaaacctgaaaaaa
gtttgattaccttaaaggaagaaattttggcgggaatttaatttggtgga
tggccaaaaaagttttttcagagggaatttaatttggcggatggacgaaa
aagctaaatttggcgggtatttaatttggcggtcgcttaaaaatctaacc
ttaagatggcgtaaaaacagcgaaaaaatagcgaaaacaccttaaaagag
atcatattttcaaaatgtttaatttggcgggaatttaatttggcggatgg
cggaaaaaagaaattttggcgggaacttaatttggcggatttcagtcaaa
tccgccaaatccgccaaattttctttccgccaaaatttcttcctttaagg
tacttgttaaactttacatgcgcacgtttaactttttcatgcaattgtga
tagcctaaataactttcgctccagtggtttggtgaaatagctccaaattc
tggctttctaagttaggagagacattcccgaaggcatttaacggtggtta
gactaggtacacagacagtcatacagaaacaccataaagggaaagtatat
cgctagctataaactcaaaaagtctagcttcctgaaggcacgtctcttca
ttgtctgcgctgcgatcagcttgcatcatgaaaaagtactatgcacttga
aaagaaatttaggcgcattttaacttttctcgactgtacgtctgaatgaa
ccacaatggcattcctttacttttcttttgaccaacaacatagaagattt
tgcttgagaagtgcaatcacagcgtacgctagtggagccttaacccgggc
cttaactaggataagtgagtttctatttcacccaacttaagatggcgcag
aactttttgataaattttatatgcagtatcctcttgactattgtttatta
ggcaaagtagcaatagagaaatgttgaaatatagcagccaatgaaaaaaa
acagctatttctgattggttaccttgtggatttattcactgcgtatgtcc
atatattttgcctacaatctaagatgtctgcgacattattagaaaaggtc
tatttagtgaataataatcatgacatatatcgctataagaaagaaactag
gagaaaaaacaaacaaacaggagatgtgaaaatcagtaagataatgatag
cataactttttaaatatatttttgagaggcttttccagcttttcattaaa
ttttattaagttatcaagctgcatgaattcctcaagtatgtattttttta
taatggaatataattttttttttcaagcaaacgcctcaatcaatcaataa
atcaatctatcaatcaataaatcaaccaatcaaccaatcaatcaataatt
aaatcaatcaattattcctgattattttttaatgtttaatctttaaagca
ttaaagctgtataagtgcatgacatgatctttatgtgggggcatttagtg
aaagctatgactagtttaatAATAATGAGGCAattcaaaaaactgaaaaa
ttctagagattttttaaattctagtgaatctaatttttgaatttagaatA
GTTCTATAATTTCTTAACCattcttacacccctgtctcgcagccccggtg
gaacttcttcccaaagtggagatcaaaatttattatttattacaaattct
attgttccttgttcaaaaaatccagtgggaaggttttggattttttttct
attgaattttaaatggggatgaaaacaaagtcaattttcccaGCGGGACA
AAAATGAAGGGTACATTTCCGACAGGGTGTTCACTGGTTAGGAGTGTAGT
CttcttgtgaaaatttaattgtTCCCTTGGCAATAGCACGCTGCTGTGCA
GACGTCATAAttgaattattacttttaacatttgatCGAAATTCAATCCC
TATGGCTTCGCTATACAAATGTCCttgttattacttttttattgtcaata
agtgtaattgacttgcaaaagcaattaatgcaaaggatgatgAGATTAAA
ACTCGAACAAACAataattttgatgtctatttttagAatcaCtACGGTAT
GCTATTGAAATCTTGTATCTTGTATGTAAGTTAATTTGCGCTTAGGTCGA
TGCTTAGGTAAATCAACCCTCATGGAGAGAAGATTTAATGTTTGATAATT
GTCTATTTTTTAGAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAA
ATCGAAATGAATGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAA
AGGGCCTGAAGCTTTGAGATACCTTCAAGAGTAAATATAATGGAAAACTT
CTGAACTGAACAATGATTGGTAGAGAGCTGACGAAGCTGAAAAAGCTAAA
ACTGTTATATGCAAATTGTAGTTAGTGAAATTCAAACTACCCCTgctttt
ttggtAaaaatgtgTAAATATTGCTCAAAATATCAGCAATTCAAGAAAGC
GAAAGATTCAAGAAAAGAAGACTACTTTGTGTTATTTTAAAGTATATACt
tgtatatatttatttttgctaTATTGAATGGAAAAGTTATTTTTGgataa
aaagtgaaaagaaatcTCTTGAATCAAATAAATCCTACTTCAATAAAAGA
ACCAAATCACCAAATCAACACCTCAGGTTACAGGCATTTTTTGGTCCAAA
CCCAAATATTAATGATATCATTAAAGCCAATCTAAAGccattcattttca
ttttaaaaaatccTCCAGTTTTCGGCTACGACTGTAATAAACGAATGCTG
TGAAGATTAGATAAAGGGATATGAATATAGGGACCATCAGCCAATTCAGC
GTATTAGAATGGAAAATCAGTGTTCGACGTTATCACTGGTGGAAGCAACG
TTATGATTTGGAACTTTAAAAAAGTGTCAAATCTTTTTCATCACCAAGGT
ACATGTCCCATATTGCATGGACTAGTACTTAAGTTAGCACTTTTTtcagg
acaccctgtatatgATGCACTTCATTTAgatttaaccctattcgtccTAG
CATCGACCTCTGTCCTAgggggggtttctgttcggaggtcaaattacGAA
ATTaatggtaatagctcctgaaataaaagAGCTTTTGCCataaaattttc
tgtaaattcctaacttttatttagcttcaaaataaagaaaaatttgatat
ctaaaatttttacaccttgagcatgatgacatttctgacagtaaggtgtc
acaaaaattgacacttttccaatacaaatttattttttatgtcaaatata
tcgtttaaaccgtaatgtATTGAgtttttaggataaaataagcattttag
actgaagcaacttttttctaaagtctttgttagaatacaatagctattta
taagaacaaaggaaatttattggtttttgctcactttgggcatgatgagt
gatgtcatcaaaaaatcttttgtcaaaagttaccttatgtgacaagaatc
ctgtgtgccaaatttcatccaagaAGATCGActaaatcaaaagttaaggg
gtggtacaggaaaagcctccctagttttgaaccgcccctaaaagcctagt
a Coding sequence (CDS) from alignment at sc0000081_pilon:419283..427333+ >MSTRG.11273.1.p1 ID=MSTRG.11273.1.p1|Name=MSTRG.11273.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3048bp|location=Sequence derived from alignment at sc0000081_pilon:419283..427333+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACGAATTGCAGGATT
CGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGAAAGCCGTGGAAA
GAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAAGAAGTTCGGGCT
GAAAGGCAAGACGCACTGGAACGTAAAGAATATAAACTAGGCCAGTTAGA
ACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAATCAAACAAAGCA
TGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGAGAAGAACAAAAG
TTGAATGACACGTTaaaaaaaCAATCGGAGTTGCAAGCAAACATGATCAG
GAATATGAGACGAAGAGATACGATTGAGAAACAGATTCTCGCCTTCCAAG
AGAAAGAATCGAAGTACCGTGAAAAGATGAAAGAGCTAAAAGATAAACTT
TCCTACCGAATTGCAAGAGGTGATGAATGCAAAAAATCGATTCTAGAGAA
AGTGGACAATATCAAGAAAATGCATGCTGCAATGCTTCAGATGGAACCAA
AACTACGTGAAATGGTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTT
GAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAATCAGAGCCAAACA
TAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGAATGAAGTCAAAT
TCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAAGCTTTGAGATAC
CTTCAAGAGTAAATGAGTTTTTCAAATGCGCAAGCAAACATGGAATCACG
AATTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCGCCAGAAAAGAGA
AAGCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTCAGATTCATGAAA
GAAGTTCGGGCTGAAAGGCAAGACGCACTGGAACGTAAAGAATATAAACT
AGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATCGTATGGATGCAA
TCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGAGATATCGGCAGA
GAAGAACAAAAGTTGAATGACACGTTaaaaaaaCAATCGGAGTTGCAAGC
AAACATGATCAGGAATATGAGACGAAGAGATACGATTGAGAAACAGATTC
TCGCCTTCCAAGAGAAAGAATCGAAGTACCGTGAAAAGATGAAAGAGCTA
AAAGATAAACTTTCCTACCGAATTGCAAGAGGTGATGAATGCAAAAAATC
GATTCTAGAGAAAGTGGACAATATCAAGAAAATGCATGCTGCAATGCTTC
AGATGGAACCAAAACTACGTGAAATGGTAACTCGAATGCGATGTGCAGAA
GTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAAAGAGAATGAAAT
CAGAGCCAAACATAAAGACTGTCTTATTGCATGTGATCAAATCGAAATGA
ATGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATACAAAGGGCCTGAA
GCTTTGAGATACCTTCAAGAGTAAATGAGTTTTTCAAATGCGCAAGCAAA
CATGGAATCACGAATTGCAGGATTCGAAAAGAAGGAGAAACAATGCATCG
CCAGAAAAGAGAAAGCCGTGGAAAGAATTAACACAGCACGAGAAAAGCTC
AGATTCATGAAAGAAGTTCGGGCTGAAAGGCAAGACGCACTGGAACGTAA
AGAATATAAACTAGGCCAGTTAGAACAACGTTTAAAGACTGTTGAATATC
GTATGGATGCAATCAAACAAAGCATGAGGTCAAGGAACAATGCTAACGGA
GATATCGGCAGAGAAGAACAAAAGTTGAATGACACGTTaaaaaaaCAATC
GGAGTTGCAAGCAAACATGATCAGGAATATGAGACGAAGAGATACGATTG
AGAAACAGATTCTCGCCTTCCAAGAGAAAGAATCGAAGTACCGTGAAAAG
ATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGCAAGAGGTGATGA
ATGCAAAAAATCGATTCTAGAGAAAGTGGACAATATCAAGAAAATGCATG
CTGCAATGCTTCAGATGGAACCAAAACTACGTGAAATGGTAACTCGAATG
CGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGAAGATCACAAGTAA
AGAGAATGAAATCAGAGCCAAACATAAAGACTGTCTTATTGCATGTGATC
AAATCGAAATGAATGAAGTCAAATTCGAAAGACAACGTGAAAGAAAATAC
AAAGGGCCTGAAGCTTTGAGATACCTTCAAGAGTAAATGAGTTTTTCAAA
TGCGCAAGCAAACATGGAATCACGAATTGCAGGATTCGAAAAGAAGGAGA
AACAATGCATCGCCAGAAAAGAGAAAGCCGTGGAAAGAATTAACACAGCA
CGAGAAAAGCTCAGATTCATGAAAGAAGTTCGGGCTGAAAGGCAAGACGC
ACTGGAACGTAAAGAATATAAACTAGGCCAGTTAGAACAACGTTTAAAGA
CTGTTGAATATCGTATGGATGCAATCAAACAAAGCATGAGGTCAAGGAAC
AATGCTAACGGAGATATCGGCAGAGAAGAACAAAAGTTGAATGACACGTT
aaaaaaaCAATCGGAGTTGCAAGCAAACATGATCAGGAATATGAGACGAA
GAGATACGATTGAGAAACAGATTCTCGCCTTCCAAGAGAAAGAATCGAAG
TACCGTGAAAAGATGAAAGAGCTAAAAGATAAACTTTCCTACCGAATTGC
AAGAGGTGATGAATGCAAAAAATCGATTCTAGAGAAAGTGGACAATATCA
AGAAAATGCATGCTGCAATGCTTCAGATGGAACCAAAACTACGTGAAATG
GTAACTCGAATGCGATGTGCAGAAGTTACCGTCCTTGAGCTTGAAAAGAA
GATCACAAGTAAAGAGAATGAAATCAGAGCCAAACATAAAGACTGTCTTA
TTGCATGTGATCAAATCGAAATGAATGAAGTCAAATTCGAAAGACAACGT
GAAAGAAAATACAAAGGGCCTGAAGCTTTGAGATACCTTCAAGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:419283..427333 + |
|
