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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:291775..296347+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11260.2.p1 ID=MSTRG.11260.2.p1|Name=MSTRG.11260.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4573bp|location=Sequence derived from alignment at sc0000081_pilon:291775..296347+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTAGAGAttcattaaatcaaatattaagaaatctaaaaataatctgaa
aaacaGAAATGACCAAACTAACTTATCCTGAAGTGCGTCGAGACAATGAG
GCTATTGATGATTTTCATGGAAACAAAATCCCCAACCCCTATCTATGGCT
GGAAGATCCTGATTCATCAGAAACTaaagattttgttgaaaaacaGAACG
AGTTAACTAAATCAGTACTCGAAACGTGTGAAACAAGAGATAAGTTCAAT
AAAAGGTAATAAAATTTGAgtttgtttacaatttgattctttttgcCTCA
CTGATTCCAATCAATCTGCAAGggataaatttattttctattcCATACAT
GTGACGTCATAGGACACTGTGGCTAAATCTTCATAAATTTAGTTAGAgct
attctatttttttttctcatttcaagGCAGGTGAAACAAAATAATGTGCC
ATCTTGTCTGAAAGTATACCACATTAAAAAGCTTAAATTCacagttgaaa
tattttgacactgcaattacttcaaaatttcaaggctcACGCAAACAAAA
TTGTGACGCCAATCTATTAAaaatggcgcattattttgtttttatgaaaa
ggCCAATGCTGCTTTTGCTGTTGttaagtaatgaacctctttaATCAAAA
tctcttcaatttttttaagtacaaactatattcatgatatgcaccacagC
AATGTCTaatgacattacatcacggacccaacagctgattgttTGTAAGT
ggcgtaaaatcagtcaatacatcactttcaaccaattagCTGTTGGGTTt
gcggaagacattgcaatgatgcatatcatgaataagaacataaagctaaA
GGCTTTGATCATGTCCAAAATgtttagaacaagttaagaacgtttAACAG
GCTTCgctgactctaaaacacccgatttcttagagaAATGGACAATGata
ctcataaaatggtgaGTATTAGAACatatgatgttcttataaaaaaatta
aaatttctattgttttgttaTAGAATGACAAAGTTATACGATTATCCAAA
ACATGGCTGTCCGTTCCGAAGGGGTAACCGGTATTTTTATTACCACAACA
CTGGATTGCAAAACCAAAGGTAAATTTTTTATTAGTACATTGTCAttgat
tttccttgaggaatacaaaCAATAGACAATggttttccttgagaaataca
agcAATAGAGAATGATTTTCCTTAAGAAATACATGAATATGAGAAGTTTT
TCAATAAAGCAAAAACGGTTTTCCTAGGGAAAATGACAAGTATGATTtcc
cttgagaaatacaaaagataaaagtgaaaacccacTCAAATGGTATTAGA
TATTCTTCTAtacctaaaattttgcaaatatcCAAGAgcaaattgagaaa
aattagaaatttccaagaaattgattttactgattttaGCATTAGTGcaa
ttccttttttgttttcttgtttctaGCCCCCTTTACGTGCAAGAAAAACT
TGGTGGGGATTCCAAAGTGTTTCTAGATGCAAATGCAATGGATTTGAAAG
GATTGATTGCCATCTCGAGAGTATCTTTCTCAGAAGATGGGGAATTATGT
GCCTACAGTATCAGCAAGAAGGGCTCGGACTGGAACACTATTAAGGTGAG
TTTGATTGTAAAGGGAGAGCATTCGGCTATGGCTCGCAAGGTTGTGAGTT
CAATCCCTGGTCGGATCTATTCAGACTCAAACCGGTAGTACTTAACACTT
CTCTGCCTAATGATCAGCAATATAAAAGAAGGCAAGGGTAGGTGGGATAA
ACCAAGGGTAGGTGGGATAAACCAAGGGTAGGTGGGATAAACCAGAAAGA
AAAAGGCAGAGGAGTACCATAGCTTATAAAAGTAGAGCAATCGGCTATGG
TGcgtaaggttgtgggttcaattcCTGGTCGGTTAATAATAGAATTTGAA
AACCCCCACTTATTAAAAACAAGAGAATAAAAACATCGTAAACAATCAAA
AAGAAGTATCATGGGTAAACGGagtaatccagggagaaagagttgCGACA
TTTCCCATACCCTTTTGAATAgatcataaattacgtcacgagcagtACTT
AACTCGTTTTCGATATATTGCTACaggtaattgattcccagaggagtaCA
TTTAAGAAGTCGACTCTATTGATAAAAGTAATACTCAAAGTCTCAAGGGG
TATAATCACCTTAGtcatggtttcaaaacgagggagtcgttgcactcaaa
ataatttataaaaaggccTATTAAAGCTCTTCGCATTTGTTTCCCTGTTA
CGTTTAGAATTTGTTTCTATAATTTTTACGTTTTAGTTCATGAAAGTAGG
AGACCAACAAGAACTACCAGACGTTTTGGAGAACGTCAAATTTAGTTGCA
TTACATGGACGCACGATCATAAAGGTGTTTTTTATAACGTAAGTTTAGAA
GAAATATTTTCCCAAGATCCCGCAGACGCAGAAGCTTTTAATTCCGTCTA
GTTTTCTGCGATTTAAAGTTAGACCTTTCCAATTTTTGATCAAACTGCCC
TAAAGGGTTGAGAGAGGTCATACTTTTCGCTCATTTTGTTTCAGAAATAT
GATAAAGACGAGAGTAAACAAGATGGAACGGAAGTGAACTCAAACCTCAA
TCAAAAGGTATGCACTCTTTCTTTGAACATAGAATTTATTTCATACTTAT
ACCGAgtgtcccagaaaaaaagtCCCTCCCTTgtaagtgaattttctcga
gttctatgaactttcggccatccgccaaattaaatttccgtcAAAACTTC
TTCCTTTAGTGAAGTTTAATATTATActctttttttggacctaccccggt
ggaggtcctataaattaacctttgtccgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttat
tagctttcctcatgattggcccgttagttttttctgattttttgcacaaa
gatgcataactataaactctcaaatgtgacggagcccgattttcaaaaaa
aaaattttttgggcaaatttgggccaaaaaacggctaaaaaacgggtttt
ttggactttgtgaaaaattaggtcgttaactttttctgattttttgcatg
aaagtagggtaccatcgtaggtaaaagatggcttaagcagatttttgcaa
aaaaattttgttggctcaaaaaacgcatgtttatctataagaatcactat
taataagcatacatcaatgttcttagtcaaattactcaattattttatga
gatagatgttttttttgctcaggagggcttacttttaaatgaatatgtgt
gtttcgacatgaaattttggttgcttggcgtgtttttatagaaaaactgg
ccaaattcgatatttttttataagcacattatcaattacttaggtattag
cttttctcgagattggctctttcattctttacgattttttgaacaaagat
gcataactataaaccctcgaatgtgacggagcccgattttcaaaaaaaaa
tttgggggggcaatttgggccaaaaaacggctaaaaaatgttttttttgg
actttgtgaaaaattggattattaattttttctgattttttgcaggaaag
taaggtaccatcataggtaaaagatggttaaagcagacttttgcaaaaaa
aatttgttgcctcaaaaaacgcatgtttatctataagaatcactattaat
aagcatgcatcaatgttcttagtcaaattactcaattttttttatgagat
ggatgttttttttgctcattagggcttacttttaaagaatatatgtgttt
gGTCATTAAATTTTCGttgcttggcttgtttttatagaaaaactggccaa
attcgatatttatttataagcacactatcaattacttaggtattagcttt
tctcaagattggctcttttattctttaattattttttgcacaaagatgca
taactataaaccctcgaatgtggcggagctcgatttttggaaaaaaaatt
ttggggtaaatttcagctaaaaaacggctaaaaaaagggttttttggact
tgttattttccgactttttgcatgaaagtaggtaaaagatggcccaagca
gatttttgtaaaaaaagaatttttcagctcaaaaaacgcatatttattta
taagaatcacttttaataagcatacatcaatgttcttaaaattactgaat
tttttgatgagatatgtttttttgctctcgaagtcttgaatatgaaagaa
tatttcaagagcatgaaattttggtttctaaacgtgttttttttataaga
aacaaacgactaattttaatagatcgtcactatttgtgttctgaatgatt
gtttaatggtcacgcttatgtagatatcaattatatatgtgttaaatgca
taaccaggtaggtccataaaagtatcacttgtttcacCTGTAGCTATACT
ACCACAAACTGGGAACAGAACAAAAAGAAGATATATTGGTCGCTGAAGCC
CCTGACCATCCCAAATGGATGAT Coding sequence (CDS) from alignment at sc0000081_pilon:291775..296347+ >MSTRG.11260.2.p1 ID=MSTRG.11260.2.p1|Name=MSTRG.11260.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000081_pilon:291775..296347+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCAAACTAACTTATCCTGAAGTGCGTCGAGACAATGAGGCTATTGA
TGATTTTCATGGAAACAAAATCCCCAACCCCTATCTATGGCTGGAAGATC
CTGATTCATCAGAAACTaaagattttgttgaaaaacaGAACGAGTTAACT
AAATCAGTACTCGAAACGTGTGAAACAAGAGATAAGTTCAATAAAAGAAT
GACAAAGTTATACGATTATCCAAAACATGGCTGTCCGTTCCGAAGGGGTA
ACCGGTATTTTTATTACCACAACACTGGATTGCAAAACCAAAGTTCATGA
ATGACCAAACTAACTTATCCTGAAGTGCGTCGAGACAATGAGGCTATTGA
TGATTTTCATGGAAACAAAATCCCCAACCCCTATCTATGGCTGGAAGATC
CTGATTCATCAGAAACTaaagattttgttgaaaaacaGAACGAGTTAACT
AAATCAGTACTCGAAACGTGTGAAACAAGAGATAAGTTCAATAAAAGAAT
GACAAAGTTATACGATTATCCAAAACATGGCTGTCCGTTCCGAAGGGGTA
ACCGGTATTTTTATTACCACAACACTGGATTGCAAAACCAAAGTTCATGA
ATGACCAAACTAACTTATCCTGAAGTGCGTCGAGACAATGAGGCTATTGA
TGATTTTCATGGAAACAAAATCCCCAACCCCTATCTATGGCTGGAAGATC
CTGATTCATCAGAAACTaaagattttgttgaaaaacaGAACGAGTTAACT
AAATCAGTACTCGAAACGTGTGAAACAAGAGATAAGTTCAATAAAAGAAT
GACAAAGTTATACGATTATCCAAAACATGGCTGTCCGTTCCGAAGGGGTA
ACCGGTATTTTTATTACCACAACACTGGATTGCAAAACCAAAGTTCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:291775..296347 + |
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