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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:84169..87078- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11247.1.p1 ID=MSTRG.11247.1.p1|Name=MSTRG.11247.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2910bp|location=Sequence derived from alignment at sc0000081_pilon:84169..87078- (Clytia hemisphaerica_ch_hm2_pilon)
GCGATTGGAGAGAAAAGACGTATCATGATATGTGTCACAATTATCAACGT
TTTATCTTTCATTCTCTGCCTTGTGCATGCAGACAGTTCTAGCAGCGATG
TTAGCAGTTTAAAAAATGATTTTAAACGACTTCAAGCAAACTATACAAAA
TTATTAGAAAGATTAAAACTTTCTTCCACCTATTGCATGCTCCACGCTCC
AGGTAAATGTGGTTCATGTATTTGTAAAGATGATTTGACCATTCCTACGA
AATTCTACTGTGATTGCCGAAATATAAAACCAGAACGTGACTGCCTAGCA
CACAGGCAAAACGGGATGGCTATTGATGGTTATTATAAGGTCACAATGAA
CGGATATCGAATGACTCAAGTTTATTGTGATCAAACAACATCAGGAGGCG
GTTGGACCGTTATTCAAAGACGTATGGATGGATCGGTCAATTTCTTCAGA
AGATGGGATGAATACAAGGTAAGTTATTCACCTTTTTTTTTTATTAGTTA
TTGCTCTGTTGCTCAAATTAAATTTGTGAAAGATTTAAAACATACATCGC
TCAAAGAAACGACTTGTCGCCTTAATTTTCAATTTTCCTACTAACCAGGT
TGGCTTTGGGAAACTGCATCGGGAATTTTGGTTTGGAAATGAAAACATAC
ATGTTTTATCTGCACAGGCTGTTTACCCAAAAGGATCAGAATTAAAGGTT
CAAATGAAACTTCTTGGGTATACAAGCTGGTATAACAACACATTCACACA
TTTCCAGGTAGATAGCGAACGAAGTAATTATCTTTTACACGTTAGTGGTG
GAACTCAGAAATCAGCAACTCAGTTCGCAGATTACCAAAACAAAGTCGAA
TTTTCGACCTGGGACAAGGATAATGATGACTATTCTTCTTGTAATTGTGC
AAAGGATTATCAATTCACGGGTTGGTGGATTAAAGGCACTGATGGAAATT
GCATTGGGAAATACAAATTCAATTATAATGGTCCGTTCGACAAATTCCAT
GAAAAGCATCATTACCAACGAATCAACCATTACAGGTACCAACCGACTTT
CATAGAGCTTAAAGTGCGACGATTATAAATACATACATGCTCTATTTAAA
AAAAAACTCAAGTAAACTCAAACGGTCATTTCAAATACGACAGTATCTAG
GATACTTAAACAAGTTAAAGTCGGTATTATATCTTGATACTTTTGTAATA
TTATATGTCCCAGCTGTTAACTCTTAGGTTGGTTTCAGCATAATTTTAAT
TTTTGAAAATTTACATATTTGTTCAAAAAGAAACAAAAAAATTGTATTGA
TGTGATAAAGTTTTGAAATATGATTTTATCAATGAAGAACCCTAATCTAT
ATTATAATATACCCATACGTGCCATTTTTTCCTCAGCGGTTTTGATTTTC
GCTAGGGACCACGCTTTTTTCTCGACACGGTGATAAAAAATCGCGTGGGC
TCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCT
GACTGGTTACATCAACAAAACTATGGCATGTTATACATTTTCTGTTAGGC
CAACTATTCTTGAATCTGAAAATTTAAACATTGCATTGAAAAAATTTGAT
GAAGAAGAAAATGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGAAGA
GCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAAAGTTTTCGCAGTAGAT
GGTGTATCTTTTACCGAACAATAAAAATTTTTGCGGAAAATTTTTGTAAA
TGCTTCTTTGTCTCAAAATCTTCAAAATAGTGGTGTTTCATCAATTTTTA
ATCTGAATTTTGCTTAAAAAAACAGTCATAACTTTTGACACATCTTTTTA
GAAAAATTTTCCGCAAAATTTAAAATAGTTCAATTCTTTGCGGACAGTTT
GAAAAAAGTTCGAAACAAAAAGGTTAATTACCCATTAAAACTTAGCACTT
TTTATAAAAGAAGGTGATGCAACATAATGCAACGTCTTTTTAAAGCTCAT
AACGTCATTTTTGCAAATAAGTTTTTAATTACTCTTAAGGGGTTTGATTA
AAGAGCAATTCATAAAGGCGATTCTTTGTTAAAAATGTTAAAGAATCTAA
AACATAACTTTTATGTTCAGAAACTAAAATCAATTTTCTGACTATGGTCA
GAGCCCTTAAGAGATCTACCCAGGGATATGTTTTTGATTAATATCAAATT
TTTGAAGATATTTGTAATCCTTAACCCTGATTAGTACCATGACAAATAGA
GTACGGTAAACTTACGCATTTCTTCAAATTAAATTTCGTTATTTATTCAA
AAATTTGCGATATCTTGAAAACTTTCAAAAGCAACTTTGTACTCTTGACG
AAGGAAAATTATTCACGAGAATTTGTTTTCATTTTTTGCAAAAAAAATTA
TTTTCAAAGTTTTCAAAGTCACACTAAAATGCGGACAGATGATTGCAAAA
TATCCATTGATTGCCCCTTTAGTTAGGAAGAAGAAATATATAGTATGTGG
CAATAAATTGCATTGCAACGCCTGAATCCAATTCTCAAAATTTCAAACAT
TCAGATCTTCAGATCACTTTTACATTAAAGTTCCTGTCTCATACAACTCG
TCCTAATGCAACAGGTTAAAGATATCAAACTATTTAAGTTATTCGTTGGA
ATGGTATTTATACCATAAAAATAAAACGTACATCTTGTAAGTGAATATTG
TACAGAAAACCGGGAGAAAATCAGACTTACCACTTCATTTTCCAGTATCG
GGTTATCCAATAAGAATTTGACGAGATTTCCTGTTCCATTGAAAGTGGTG
TTGCCTTCAGTGTAATTCGCTGCTAGTCCATCGTATTCCCTTTTTGCGTT
TATCTGTAATCAAATTTAGTACAATTGCAGTAGAAAATCGTGCCTGAATA
GTTAAGCCCG Coding sequence (CDS) from alignment at sc0000081_pilon:84169..87078- >MSTRG.11247.1.p1 ID=MSTRG.11247.1.p1|Name=MSTRG.11247.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000081_pilon:84169..87078- (Clytia hemisphaerica_ch_hm2_pilon)
TTATTCGTTGGAATGGTATTTATACCATAAAAATAAAACGTACATCTTGT
AAGTGAGTTGGCTTTGGGAAACTGCATCGGGAATTTTGGTTTGGAAATGA
AAACATACATGTTTTATCTGCACAGGCTGTTTACCCAAAAGGATCAGAAT
TAAAGGTTCAAATGAAACTTCTTGGGTATACAAGCTGGTATAACAACACA
TTCACACATTTCCAGGTAGATAGCGAACGAAGTAATTATCTTTTACACGT
TAGTGGTGGAACTCAGAAATCAGCAACTCAGTTCGCAGATTACCAAAACA
AAGTCGAATTTTCGACCTGGGACAAGGATAATGATGACTATTCTTCTTGC
GATTGGAGAGAAAAGACGTATCATGATATGTGTCACAATTATCAACGTTT
TATCTTTCATTCTCTGCCTTGTGCATGCAGACAGTTCTAGCAGCGATGTT
AGCAGTTTAAAAAATGATTTTAAACGACTTCAAGCAAACTATACAAAATT
ATTAGAAAGATTAAAACTTTCTTCCACCTATTGCATGCTCCACGCTCCAG
GTAAATGTGGTTCATGTATTTGTAAAGATGATTTGACCATTCCTACGAAA
TTCTACTGTGATTGCCGAAATATAAAACCAGAACGTGACTGCCTAGCACA
CAGGCAAAACGGGATGGCTATTGATGGTTATTATAAGGTCACAATGAACG
GATATCGAATGACTCAAGTTTATTGTGATCAAACAACATCAGGAGGCGGT
TGGACCGTTATTCAAAGACGTATGGATGGATCGGTCAATTTCTTCAGAAG
ATGGGATGAATACAAGTTATTCGTTGGAATGGTATTTATACCATAAAAAT
AAAACGTACATCTTGTAAGTGAGTTGGCTTTGGGAAACTGCATCGGGAAT
TTTGGTTTGGAAATGAAAACATACATGTTTTATCTGCACAGGCTGTTTAC
CCAAAAGGATCAGAATTAAAGGTTCAAATGAAACTTCTTGGGTATACAAG
CTGGTATAACAACACATTCACACATTTCCAGGTAGATAGCGAACGAAGTA
ATTATCTTTTACACGTTAGTGGTGGAACTCAGAAATCAGCAACTCAGTTC
GCAGATTACCAAAACAAAGTCGAATTTTCGACCTGGGACAAGGATAATGA
TGACTATTCTTCTTGCGATTGGAGAGAAAAGACGTATCATGATATGTGTC
ACAATTATCAACGTTTTATCTTTCATTCTCTGCCTTGTGCATGCAGACAG
TTCTAGCAGCGATGTTAGCAGTTTAAAAAATGATTTTAAACGACTTCAAG
CAAACTATACAAAATTATTAGAAAGATTAAAACTTTCTTCCACCTATTGC
ATGCTCCACGCTCCAGGTAAATGTGGTTCATGTATTTGTAAAGATGATTT
GACCATTCCTACGAAATTCTACTGTGATTGCCGAAATATAAAACCAGAAC
GTGACTGCCTAGCACACAGGCAAAACGGGATGGCTATTGATGGTTATTAT
AAGGTCACAATGAACGGATATCGAATGACTCAAGTTTATTGTGATCAAAC
AACATCAGGAGGCGGTTGGACCGTTATTCAAAGACGTATGGATGGATCGG
TCAATTTCTTCAGAAGATGGGATGAATACAAGTTATTCGTTGGAATGGTA
TTTATACCATAAAAATAAAACGTACATCTTGTAAGTGAGTTGGCTTTGGG
AAACTGCATCGGGAATTTTGGTTTGGAAATGAAAACATACATGTTTTATC
TGCACAGGCTGTTTACCCAAAAGGATCAGAATTAAAGGTTCAAATGAAAC
TTCTTGGGTATACAAGCTGGTATAACAACACATTCACACATTTCCAGGTA
GATAGCGAACGAAGTAATTATCTTTTACACGTTAGTGGTGGAACTCAGAA
ATCAGCAACTCAGTTCGCAGATTACCAAAACAAAGTCGAATTTTCGACCT
GGGACAAGGATAATGATGACTATTCTTCTTGCGATTGGAGAGAAAAGACG
TATCATGATATGTGTCACAATTATCAACGTTTTATCTTTCATTCTCTGCC
TTGTGCATGCAGACAGTTCTAGCAGCGATGTTAGCAGTTTAAAAAATGAT
TTTAAACGACTTCAAGCAAACTATACAAAATTATTAGAAAGATTAAAACT
TTCTTCCACCTATTGCATGCTCCACGCTCCAGGTAAATGTGGTTCATGTA
TTTGTAAAGATGATTTGACCATTCCTACGAAATTCTACTGTGATTGCCGA
AATATAAAACCAGAACGTGACTGCCTAGCACACAGGCAAAACGGGATGGC
TATTGATGGTTATTATAAGGTCACAATGAACGGATATCGAATGACTCAAG
TTTATTGTGATCAAACAACATCAGGAGGCGGTTGGACCGTTATTCAAAGA
CGTATGGATGGATCGGTCAATTTCTTCAGAAGATGGGATGAATACAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:84169..87078 - |
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