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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000081_pilon:53233..62491- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11245.1.p2 ID=MSTRG.11245.1.p2|Name=MSTRG.11245.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9259bp|location=Sequence derived from alignment at sc0000081_pilon:53233..62491- (Clytia hemisphaerica_ch_hm2_pilon)
CGAACGAAAGCGCAAGGTCATTTCCGCATTATTTTTTCGCCCGGGTGCGT
GTAAGTTGTCATAGTTCGGATGTAAACAAACAACTGGAAATCATCAAAAC
AAAATGGCGACGGAGTGAACAATCACAGATCAAAATCAGGAAAAGACCAG
CCAGTGATCAGGTTTTACAGCTCATTCATTGATTGAAAATGTCCTCACTT
ATCATGCATGGAAGAAGAGAAGGTCAGGTGAAGAATGGAGGTACCAATTT
TTGCCATATTTCACTTTCTGATTCGAAATGCAAGCAAAATCTTTGTGTTC
TTTACTTTTTTATGGCGCGCCGAATTACTTTTTATTATCAACTTTTTTTT
CGACACCAACTTTTGTTTTTTGACATCAGTTTTATTTTCTGATACCAACT
TTTCGTTTTTTGCGACCAACTTCATGTTTTTTCATACAGTCATCTTTTTT
TCTCCGACACCAATTTTTTTTTTCGGCACCAATTTTTTTTCCAATAGACC
TTTTTTTAAAGAGGTAAACCCTGTTGAATAATTATGTAGTCCAGCATAAA
AACAATGATACAGCCATGCATAATTACTGTTTCATGCATATTATAATAAT
TAAGCATGGCTATATCATTGTTTTTTTTGCTGGACTACATAATTATTCAA
CAGGGTGGCCTCATTATTAAAAAAAGGTCTATACCAACTTCTTTTCAAGA
CCCGGTTACGAAACTTCTTTTTTACGAAGTCAACCTTTTTGGTTATTGTC
TCGTCCACCCAACCTGATTAATATAATGTGTGTCTGGGGCTTTAACGAAA
TGCCCACCATGAAACTTTTCCAAACGGGATTGAAAAAATAAAAAGCTGAA
ACACCAGCATGAATACTGACTAGGACGAAGTCTGGAAGTTTGTTTCGGTT
GAACTTGAAGTCATTCCTATAGTTTGTACTTGTATATACTTTGTGTTTTA
CTTCAAATTTGGTTTGTGAACTTTCAGTTTTTTTTCTGTTGTTTTTTCCT
ATCGCTAGATTTCACAAAATGTAGTCCTCCAAAACAAAAGAATCACTAGA
TACAATCCGTCGTCATGATTGGAGTGCGTTCTATGCGCGTTTGGGAAAAT
AAGTAGCAGGGAAATAAGTAGCTTCAATTTCTCTTGCCTGAGAAGGGTTA
AAGATTCGCCTCTAGCCCTTCGGGCTTGAAACTCAATGGTCATCACGCCC
AATCGTGCCGCCTTTTTAGAGCAGAATAGATTATTGGCAATGATGTAGTA
AAGCCCGAAGCAGCCGAAGGGCTAGCTAGATGTTGAATAAGTCACGTGAC
ATTCTAATAGAATTTCAGAGCTTGACCAATCAGAAGATTTTCGGAAAGAT
TAGCAGAAATATTTTTTCCGATGTTCACTTTTTTTGCTTGGAAGAGCTTA
AAGCACTCCATCTAGCCCTTCGGGCTTTACAGAAATCTGGTATCGCGTTG
TGTACCGTAAAAAGCACAGGTCGAAATCTTATGTCGACGCTGTGCTGACG
AATCGAGATTCTATTCAGCGCGCAATCAACGCAGACAAAAGTAACCATGA
CGACCATCCAAGATCTTGGATGAAGTTCAAAGTTGATATTTTTATTCCCA
TTTAGTAATTACTGTTATACATTTGGGGATCACGTACTGTAAAAGATTTC
TTTTGAAAGAAACTCACTTCAATTAAACTTTCTGGGGAATTCTAATATCT
TTAAGGTTTCTGGGGAATTCGTAAATAGTAAACTGCATACTGATACAGTC
TGCTAGATATTTTTAATAAGGTAATATTTGCTCTTCATCTTTGATACGTT
CTACAGTGATTAGATTGACACATACACGATATAATTCCTATTATCGGTCT
TCAGAGGTTAATATATTCTTTGAAAACTTAACCTCTGATACTCAGGGTAC
GTTAGAAGGTAATCGAGACAAGAGTTAGTATCGGAAAATAAAAGTTGGTA
GTAAGGGAAAAAAATGGTATCGAAAAAAAAAAGTTAGTGTCGAAAAAAAA
AAGTTTGTTTGGTGTCGAAAAAAAAAGTTTGTGTTGAAAAAAAAAAGTTG
GTGTCGAAAAAAAAAGTTGGTGTCGAAAAAAAAGTTGGTAATAAAATAGT
TCTTTTCTAAAGCTGGGCACAGCACATAGATAGGAAAAGACAGGCTGATT
TAATTCATAAATTGAAAACATATAGTACTGCCAAAATATGTTTCATATTT
TTTCTTTTAATCAGTACACAATCTTTAATTTGTAAGGGGTCACTCACATA
AATTTTTGGTTAGAAAAATGTCAATTGACGAAGCGTTCAAAAAAAAAGTT
TATTACAGTATTTATTTTCACCAGAATATTAATAAAAGTTCATTCTGGGC
TGTTTGTTTTGGTTTTCAAAACAGACGAAGCAAGTGGGTGGATGGGTTAA
AAGTTGTTGACGTTTTTTTCAAATCTAGCTAGAAACATTGATATTTTTTA
CTCGCCATGTTTCAGTTTGATCGCTTCGTCTGTTTTGAAAACCAAAACAA
ATGGCCCGGAATGAACTTTTATTGATATTTCTGGTGAAAATGAATACTGT
AATAAATCACCACAAACATCATCAATTGTGTCAACTGGACAAACTTAAAA
AAATTAGCAAAAATAGAGTCAACAAGTCAGTAAACTTTATGCTATATATG
TATTTTATAATTTAGGATTAGCATCAGAGTTACCAAGAATTGGTCTCATG
GCTCAAGGAATCAATCCCAATGAGGTAGGTAAACATCCAAAGGTTTATAT
ATCTCACTATAAATAGAAGAATTGAAAAACTCTTTAATATAAAATGCTAT
GGAGATCACTTTCCTAGTTTCAGGTAGTGTGGTTTCTGTGTCAACATTCA
ACAACAAAATAAAACAGAATTTGTCTAAAATTAAAAAATATATACTTTTT
AATGAAAATTGTATGCACTTGAAATTCTTATTTAGGTTGCTGTCTTTCAA
CCAAAAGATTGGCAGCGAATACAAAATAATCTTGCACGGTACAATGAAGC
TTCAGAAAAAGCAGAACAAAAGAGACGTGATAGAGAGAATCTTCACGCAG
CGTCAAAAGAGTTGGTTAAACATTGGGAGAATACTATCGAAGGCCAGAGG
TTGAAAAAACTTCAAGCTAGAAAACTCCGCGAAGAAACAAGAAGAGGTAC
CATACCAAATTTGCTCTTTCAAGCGTACTCAATTTATTCTGTGTCTTTGT
CACTTTGTTAGTCTTACTTTTTCTTTTTGCTTTATACTCTTCACTCTTTA
TATTAACTGAACTCTGTATTAGTGAACAATTGATTAATTGAACCCCTTAG
CGTTTGAGTTTTGTGAAACTTTTGTATAGAAAGTGAATTATGATAGCTTT
GGTTGGCTTTAGTTCAAGATTCTTAAACATTCTCAAGTTAGCTATGTATC
CCATCAAATACTCTAAAACGTTTTCTTTAATTTTGATTACTCAATTTTCC
AGGCATATACTGTAACCTTTTTTTGTAAAATTATCATTTTCAGGAGGAAC
GTAAAAAGATTGATATTGAAGAAGCTAAAATTCAAGCACAAAAGCGTAAA
GAAGCCATTGAGAGGGCTAAACAACAACAATATTATGAGACTGATCGTGT
CAAAGGCTTCCATGTGAGTAGTTTTAAAGTCCCTACTTAAAAAAAAATCC
ATTGATCCTAAGTCACAGCTGATGGTAGACAACTTTCACTAGAGGCCATT
CTATTCAACGATACAATTAGTAAATGTCCTAGGACCTCAAAATGTAATAC
TTTGTAATGGTATGTATGCGTTATTCAACTTTAATGAATATCTTTCTTCT
CATAGGGTGCACTTTTATTGACTGAAGTTTTAAAGGAAAGAGATGCACAA
ATTGCTTTCAAAAATTCCAGACAGGATTTTCAGAAAGAAAGAGAAAACCA
CTTGATCAAATTGCAAAAACAGGTACCTATTTAGAGTTATGTTCAATAAT
TTGGTGCAAATCTAGAGGACCCAATTTCTAAAAGAATAATACACAATTTT
TCATATTTCGTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATT
CACCTCTGTCCGTCCGTCCGTCCGTTCGTTACCAGCTTTTCCCAAGATTG
AATCATAGGAATCATTTGGTTTTTGGTACAAAGGTGCAAAATGGTAGTGG
CCAAAATGTGACGGAGCCCTATTTTCGAAAAAAAAAAATTTGGGGTAAAT
TTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAAT
TGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGG
GTGAAGCAGATTTTTGTAAAAAAACTTTTCAGCTCAAAAAACGCATCTTT
ATCTATAAGAATCACTATTAATAAATAAGCATACATCAATGTTCTTAGCC
AAATTACTCAATTTTTTGATGAGATAGATGTTTTTATGCTCACGAAGTCT
TGAATGAAAAGAATATTTCAAGATCATGAAATTTTGGTTTCTAAACGTTT
TTTTTATAAGAAACAAACGACTAATTTTAATAAATCGTCACTATTTGTGT
TCTGAATGATTGTTTAACGTTCATGCTCACGTAGATATCAATTATATATG
TGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTGTATT
GAAATTTCATCTCATATCATCAATATCTTAGATTTGATTTTCAAATACGC
CACCAAAATGACTTTTTACATATTTAACGTTTCTTTATCAGAATCTTGAC
GATCTTCTGAAAGCAGAACAAGAAAAATTACAGGAGACTAGACAAAGATC
TACGGAAGTTGCAAATTTCCAAAAATTACAGTAAGCTATTTTTTTCTCAA
TTTTGAGTGGATTCATTGAATAATCTTTGAATAAATGTATATATCATTTG
AATTTCATTCTATAATCTGTAAGCTTTTTTGATAAAGGTTACTTTTAAAT
TTCATGATTTCAAGATTTTTTTTTTTAGGTTAAACCAATCCATTTATTTG
ATCACTTTGAAAAGCTTAAGTAGAACTTTTAATCAATATTCAAGTTTTAC
TTTACAACTGATCGATGTGTCTTTTTTTTATATAAGGGTCAAAGATTGTG
ACAACATCAAACAATTGGAAAAAAGTGAGGATAAGGAGGAAGGAAAGACT
CTGAAAGATCAATTCGATGCTTATTGTAACACCAAGAAAACCATCGCGAA
TAAACACCGCCAAAAGAAAAAGGCACTTCAAGAATTTTATAAAAATGAAA
TACAATTAAAAAGGGTAAGATCGTTTTTTGTTTGTGAAAACATGTAATAT
CTGTTCGTGATACTTTTCCATTACTATCATACTTGTCTTTTCAATGATTT
TATCCAGGGGTACTAGGTGGTTTGCGAGATGATGGTTAAATATCCGAGTC
AAATTTCGAAAATCGACCCTCAGAGAGAAAATTTTGTCCATTTTTGACGT
TTTTGCTACCCTTAGAGTAATTTTAGACCAAATTTCAATAATTTATGACC
CCTATTTTTGAATTTGGTAATTTTGGAATCCTTACAGAGACTCAATTGCT
GTTTAAATGGTTTCTGTATCCTTTTGAATGACTTTCGGAAGTGTGAAAAA
AGAACCCTTATGACGCACCCATTTTGCCTAAGTAACCCCCACCCGGATTT
TAATCCTATGGGATCCTTTTCAATGTTTTAGTAGCAATTTTATAATTGGT
CAATAACCCGTCAATGGAAGAGGAAATATTGTCGGAGAAATTAATGACAC
CTCAATTTTTCTTTCAGGAAAAAGAGCAAGAAGATCTTTTGAAAGAAGAA
GCTGAAAATGAAAAAATCAAAAAATTCGTCAAAGCGAAAAAGGTAAGAAA
TAACTCTATCTACTCCCTACACATAATGATAGAGTCGATTTCATGCTTTT
TAAATGAAAAAAGTAGGCACGCCTCGTATGCTGAAAAACCCCAATCAAAG
AAGGAATTCCTCAAAAAAGGTTAGCAGACATTGTATAGCCTTTCATTAAC
CCTTTTAAAAGTGCCAATGTCGTATTTATCAGACATGGGCTATGTAGGAG
GGGTAATTCCTCCTGTAATGCCCAGTTTGAGTTAGAAATCGTCATTTTTG
GTCTAACTCGTACGAATCGGATTGGGCTTCATAGCCAAGCAAAAAAAAAA
AAATCAAAAGTGAGTCTTTTCAGCGAGATTTTAAGCTAAAAAGTCAAAAA
TATGCAAAAATTTGACAAAACTCCACTTTTTTAAGATTTTGACAGTTTTT
TTGATAATTTCTGGTTTCTGAACGAGTTATCCAAGAACCTACAAATTTGG
ACTCTAAGCTATCCAACAGACTATAAACGAGCTTCTAACTCCTTCTAGAT
CCGGAGATATAAGCCTTTAAAGTTCGAACTAGCGATTTTCTTTAAAAAAA
TAAGAAAAAATGACCGTGGCACTTAAAGGGTTAACGCCCTCATTAGATAA
TTGTGATTTATTAACTAGAAGTAATATTCAACGGCGTGAATATGTTTCAT
TTACTTTTTAGAAAATGGCTAACATGCGGAAAGAGAAAGAACAACAGATT
TTCGAGTAAGTTTCCATTTCTTCCAATTCTTGATAACATTTGATCTTGAT
TGTTTGTCCGTTTAGAAGAAAAGAAGAAGAACGCTGAGATCTCCTGAACT
CATTTAGGGGTGTTTTTGCTGAATTTTAATCTTATTGTCTTCTTTCTCCA
TTCTTCACAGTAACTTCCAAGAACATACAGAGATGATGCGCAGTAAACTA
CAAGACAGCATGCAACAACAAATTGATGACGAAGATGATCGCATCGCCAA
AGCTGTCGCCGAACGAGAACAAAAACGAATGGTGAGGAATTTTCATCGAA
TGTCTCTTTTCCGAGTCCATCTATGACAGACCTTCCATTCATGATGTATA
CGAGGAAAAATATATTTGAAAAATTTTGAATATTAATTTGTTCATTCTTT
TGATCTTTCCATGTAACAGGAAGAATTAAACCGCAAACAGCAAAAACAAA
AGGACTCTTTACAAGCCATGAAAAATCATCGCATACAAATGGTAAGAGCT
CTTATTCATCTTACTTCTCTATTCAACAAAGTCAAGCCCATATTGAAAGA
CGATGTGAAGTCTTTGTTGATTTTTGCGTTTTCAACCATTGAGTCGAAAG
CCCCAAAGGGACTAAAGGATTAAACTCTTGCATCGGAAATGAAGCCACTT
AGTTCCCCTCTTAAACGAGTGACACGCGTTGTTTTCACAAGAAGGGCTGG
ATTGCAAGTAAAATATATCGCCAGATCTCGAAAAACGTGTCGTGTGAAGA
ATAGAAAATCGCTAGATTCAATCTGTCATTCTAAATGCGGCGCAAATCTT
AAAAGGTTTCACTTTTTCTTGCTCGAGAAAGCTCAAAGATTCCTTTCTAG
CACTTCAGGCTTTAATGTTTTTGATAATTGCATTATTTTATTGAAGCTAA
TGGCCAGATCAGATGGTTCCAGTGATTTCATTGTTTTTTTTATTGCCAGA
TGACGGATTCTAATCATCAGCAACAAGAGAATAAAGCAAAAGATCAAATG
TTGTTGCAGCAACGTATCAAGCAAGACAATAAGGTAAAAAAGTTTACATC
CAAAAAGAACGAATGTAGCTTAAACTCCTTAGCTGCTAAATCCTCAATCT
AAACTTTCAAAGACACGATTTTTTGTGACTGTACGAAAATTCATGATATG
CACCATATAATATCAATATCTTTCACATAATCACCAACTGATTGGTTACA
AGTGACGTATTGACTGATTTTACTGGATTTTATGTCACTTACAAACCAAT
CAGATATTGGGAATGTAATTTCAGAAGACATAGCAATGGCGCATATGAAA
TATACCACTGGAAAGTCTTCTAAGAATTTTTAAAATTTTCCACCCAATAA
TACGTCACTTTTTCTATTCTTTAAGTGACGTATTGGGTGAAAATTCTCGG
AAGACTCTCCAGTGGTGCATATCATGAATAGCTTAATTCTTCACGATGAT
TTGAAACTCAGTATCACGTCAATCAACTACGTTTAACATCTTTTTCCCCT
TTCAGTTTTTCGAAGACAAGAAAAAGGAGCGTAAAGAGAAACGGCAAGTA
GCAAGCAAATTACAAAGCACACACAAAGATCAGATGGTACGTAACCATTA
TTTTCTTGAAATGAGCTTAGTAACGCTCAAATTGCAGATGTAGAACGATA
AACTCGGTCTACAATCACTCACCATCTGGATAATGATATCACTTTATCTC
ACTAACATTCTGCCGATTGGTAGTGTGAAGGTTTCGATCACAGACTTTCA
CCGCAATGGACTGTGTTTGAATCCCAAGCTCTTCCAGAGAGGATGTTAGG
GAAATATGTTGATAGACTCTCCACCTTCACTCACATTATTTTCTTGGTTT
CGGAACCTGTTTTCTTACTAACAAAAGTACGTATCACGTTTTATGGGGTA
GTTACACCCTTTGCAGTTGAGCTAGTCTTGGTTGGGCGTGCGTGAGAGGT
GCGTTCCCTGAGAATGGCCTGAGAAATGTCAAATAGCGACAACAGGTGAC
AGAGATAGTTAGCTTCTGATTTGTCTAGATCCTGATTGACTGAAGAGCAG
TTACTCCACCGTCCTCAAAAGTGCAAATACATGAACTCGATATTGTTCTG
TCTTCGCGCACGCAAGGGGGAAATAAATTTCTTACACTTCTATTTCGATT
TTTTTTAGTTCCAGAAAGAAGACAAGAGTGCGAAGGAAAGAAACGAGCAA
TTGGAAGTCGATAAAAATAATAAAGAGCTTCTAGTAAAGGAAGAAGAAAT
TTTCCAAAATTACGCTGATAAAGTCATCACAAATGCTACCGATAATGGGC
GTAACCCATTTCCTTTAATTAAAGCCGCCCGAGAAGGTCCTGGTGGAGGA
CGTGGACCTAAATTTGAAGGTAATGCAGGTTTAAGGCCGAGTTATATAGT
TGCTGACGCTACTGGGGTCCAATTACCGCATTATTTGAAAGACGAAAGTG
TCGGAAATCGCGTTTACGGACATGTCGGTAAATCAGGAACCAGACTTGGA
TTCACATGGTAATTTGTACATGGTAATTTTTCTTTCAATTAATTTTTTTT
ATTTCCAAATTTTAATTTCTGATATATTTTTATATTATAAAATTCTTGGA
AATGATTAATTTATAATGATGCCGTACTGTATATATTTTTAATGATTAGA
TATAATAGAATTTGAACATAATGAACATAATTGTCCTGTTAATTCGTAGA
ATGCTGGAA Coding sequence (CDS) from alignment at sc0000081_pilon:53233..62491- >MSTRG.11245.1.p2 ID=MSTRG.11245.1.p2|Name=MSTRG.11245.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000081_pilon:53233..62491- (Clytia hemisphaerica_ch_hm2_pilon)
GAGGAACGTAAGTTGCTGTCTTTCAACCAAAAGATTGGCAGCGAATACAA
AATAATCTTGCACGGTACAATGAAGCTTCAGAAAAAGCAGAACAAAAGAG
ACGTGATAGAGAGAATCTTCACGCAGCGTCAAAAGAGTTGGTTAAACATT
GGGAGAATACTATCGAAGGCCAGAGGTTGAAAAAACTTCAAGCTAGAAAA
CTCCGCGAAGAAACAAGAAGAGGATTAGCATCAGAGTTACCAAGAATTGG
TCTCATGGCTCAAGGAATCAATCCCAATGAGATGTCCTCACTTATCATGC
ATGGAAGAAGAGAAGGTCAGGTGAAGAATGGAGGAGGAACGTAAGTTGCT
GTCTTTCAACCAAAAGATTGGCAGCGAATACAAAATAATCTTGCACGGTA
CAATGAAGCTTCAGAAAAAGCAGAACAAAAGAGACGTGATAGAGAGAATC
TTCACGCAGCGTCAAAAGAGTTGGTTAAACATTGGGAGAATACTATCGAA
GGCCAGAGGTTGAAAAAACTTCAAGCTAGAAAACTCCGCGAAGAAACAAG
AAGAGGATTAGCATCAGAGTTACCAAGAATTGGTCTCATGGCTCAAGGAA
TCAATCCCAATGAGATGTCCTCACTTATCATGCATGGAAGAAGAGAAGGT
CAGGTGAAGAATGGAGGAGGAACGTAAGTTGCTGTCTTTCAACCAAAAGA
TTGGCAGCGAATACAAAATAATCTTGCACGGTACAATGAAGCTTCAGAAA
AAGCAGAACAAAAGAGACGTGATAGAGAGAATCTTCACGCAGCGTCAAAA
GAGTTGGTTAAACATTGGGAGAATACTATCGAAGGCCAGAGGTTGAAAAA
ACTTCAAGCTAGAAAACTCCGCGAAGAAACAAGAAGAGGATTAGCATCAG
AGTTACCAAGAATTGGTCTCATGGCTCAAGGAATCAATCCCAATGAGATG
TCCTCACTTATCATGCATGGAAGAAGAGAAGGTCAGGTGAAGAATGGAGG
AGGAACGTAAGTTGCTGTCTTTCAACCAAAAGATTGGCAGCGAATACAAA
ATAATCTTGCACGGTACAATGAAGCTTCAGAAAAAGCAGAACAAAAGAGA
CGTGATAGAGAGAATCTTCACGCAGCGTCAAAAGAGTTGGTTAAACATTG
GGAGAATACTATCGAAGGCCAGAGGTTGAAAAAACTTCAAGCTAGAAAAC
TCCGCGAAGAAACAAGAAGAGGATTAGCATCAGAGTTACCAAGAATTGGT
CTCATGGCTCAAGGAATCAATCCCAATGAGATGTCCTCACTTATCATGCA
TGGAAGAAGAGAAGGTCAGGTGAAGAATGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000081_pilon | genome | sc0000081_pilon:53233..62491 - |
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