MSTRG.11202.1.p1 (mRNA) -

Overview
NameMSTRG.11202.1.p1
Unique NameMSTRG.11202.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:964550..965585+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11202.1.p1 ID=MSTRG.11202.1.p1|Name=MSTRG.11202.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1036bp|location=Sequence derived from alignment at sc0000080_pilon:964550..965585+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCCAATGAGATGGTTTGTTTACTCGAAATTTTGGTGAACTTTTATATGA
GGCACCTAACCGTAAAAAGGTGTATTGTGTATGGAATAAAAAAAGTTGGA
AGTTCACTTGTATGAATGGTTGTTCGAATGGTTGATATGGCAAATATTAA
TAAAGCTTTTGTTGGGGGATGTTTTGGTAGACAGCGGTTTTTGTTATGGC
ATTGTCAAAATTGAACCAGAAAGTCCTAAACTCGAAAATCCTTCCTAAGG
GATCGGTGTTAAAGTTGCTGAAGACTTATCAAACGAATATTGGAATGGAG
ATATTCCACCAGACAGCGAGTGGGTCAAACTTCTCCTAAAGACAATTGGA
ATTCAAGTAAAAAATGATTTAGCTCGAGAACAATCGGTAAAGAACTACTT
AAACAGCAATCAATTTTAAGTcaacatgaaaataattattttatgaaaat
aaaagttgattttttagcGAATGACAATGAAGAAAATGATTCGAGGAATT
TGAAATCACACCCAGAAAGTGATATTAATGTAGAAGTTACGTCTGTAGTC
AACCATTTGAACGGAAATGCAATCTGGAAGTTCATCTCAAAATGCACGAA
AGAACTATGCCACTTAAGCGTAATGTTTGTGGTAAATCTTTTATCTCTTA
ATCAACACCTTAGAATTCACACCGGAGTTAAGTCATACAAGTGTGTAGTT
TGTGAAAAACCTTTTGCGACTAGAAGCTATCTTAGAAATCATCTTCAAAT
TCACAGCGGAAttaatattctcaacttcagttgagctagaatgtGAGAAt
gtgtgtcTGtgtgtctgtgcgtgtgtATGATGTcccaaaactttagggca
gcctgaaGACTTTAAAAATGGTCGGACTTGGCTGagatttggcacacttg
ttccttgggtgaatatctgggggtgcttttttcatttttcaaagtttgat
ttttggggcctggggatgagtttttCGCCacaacgaggctaaaactttgg
ggcagcctggagacttcaaaaattgttccattTGGC

Coding sequence (CDS) from alignment at sc0000080_pilon:964550..965585+

>MSTRG.11202.1.p1 ID=MSTRG.11202.1.p1|Name=MSTRG.11202.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=342bp|location=Sequence derived from alignment at sc0000080_pilon:964550..965585+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaataaaagttgattttttagcGAATGACAATGAAGAAAATGATTC
GAGGAATTTGAAATCACACCCAGAAAGTGATATTAATGTAGAAGTTACGT
CTGTAGTCAACCATTTGAACGGAAATGCAATCTGGAAGTTCATCTCAAAA
TGCACGAAAGAACTATGCCACTTAAGCGTAATGTTTGTGGTAAATCTTTT
ATCTCTTAATCAACACCTTAGAATTCACACCGGAGTTAAGTCATACAAGT
GTGTAGTTTGTGAAAAACCTTTTGCGACTAGAAGCTATCTTAGAAATCAT
CTTCAAATTCACAGCGGAAttaatattctcaacttcagttga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11202MSTRG.11202Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11202.1.p1.exon1MSTRG.11202.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11202.1.p1MSTRG.11202.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:964550..965585 +