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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:2581856..2585406+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1119.1.p1 ID=MSTRG.1119.1.p1|Name=MSTRG.1119.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3551bp|location=Sequence derived from alignment at sc0000005_pilon:2581856..2585406+ (Clytia hemisphaerica_ch_hm2_pilon)
ATCACAAGACGAGTCAACATTGGAATGGGAAGGAAAACAAATTAGAAAGA
AActaaagaagaaatattttattgtaTGTACGACTGtgaaaagaaataag
aaaagaGTCTAGGAAAAGATTAATTAAAAGTATAAGCGAACCCTGAAAAT
ATTTACGTCTCAATTTATTGTTTGAAAGTTTGGAATAATTGGAATATTTG
AATTAACAGTAACAAAAAGGGTACTTGTTACAATTCTATAAAAAGACAAT
TttccttttgtaatgaaattaCTTCAATACATCACCACATAATTATCTTT
GCTTCAAGtatacaaagaatttttttttctcagcgCTGTGGTCTGAACAA
ATTTGTGCAGCAATCATTCCTAAAATAGAAGCAAAAGATGCTGCCACACG
TAGGAAGAAACttaaaagaatcaaaacaaaacaacaggTGAGTTTTGAAA
GACAAGCAAATCTAGCCATGCaaaatttgtgtttattatgATTTGATGAT
AATAATGATACTGGAGCTAAGATGCTTGTAGATGGAAATTTGATTGAACA
TCAATGGTTTGCATATGCAATATTTTGTATACTTTTCTGGTATTCTTCAA
ATAAATCCTCCTTTAATGTTACCTTAATTTAATAAGTATGATCATTTTCA
atcatgatttttttgttatattaATTAGAATAAGTTCGAAGGGTATGTCA
AAATCTATGACATGGAGGCTACTTTGAAAGCAATTGAAGAAGATCTATCA
AAAACGTTTAAGGTTTATTACTTATTAATTTATTACAAATAACAAATTTG
TTATTCCTATTTCATGAAATTCTTAGAATATTATCTTACATAATATTTAT
CAGTTtgcttcaaattttctttgtctcTAGTACTAAAACTATTTGGTCAT
TTTGATAGAAGGAAAAAAGTACAGGCTTTTGAATTCCTTCATTATAGGTT
ACTTTGAGTCTTGAAATACCTAAGCTTGATTTCATAAAAGATTCAAATCA
GAAGGTAAATGGAtattcttttcacttttttgttacCTTGTTACTAAAAT
AACTTGTGTAAAACACATTGATGAAGGTGTCTATGGAGCACTTAATAATA
ACAATCAGGCTCAAGTGCTAAATATTAGGTTGGTTAATAATTTCAAGGTT
ATTGATATCAGATGTTGAACAAAAGAATTTGATTGAATATAAAGCAAGGG
ATGATCTTTTCTTAATAAACTTTGCTTATATATAGATTGAATACAAATGA
CACTCAAAATGCCTTGAGGCAATGTTTTGATACATTTACACAATTTGATC
ATTTGGTTTCTTTCCTATTTTTAAGACAATCACACACAAAATAGACGAGG
GAAATGAAAATAAGATAAGTGCAGACAAAGTTGATGAAGAATATAAAGAT
ATTGAGGTTACAACAAAGGTTGAAATAGTTCCTTCTATTCtcctttttaa
aacaaaactatTACAAATACACTTTGCCAAAACTAAATTTAAACAAATCT
AAGATATTTCCTTATATGCTTTCAAGGCATTTTTCATACTTaggcgaaac
aaaaaaaatttcttgtttccggaaaccggccgggtgaaaaattttttttt
tctgacccggccgcaaacttttgttcgttagtagtccgtacttgttgtaa
tttagggcataatttatgctgtgtttatacataaaagttattcttaaact
ctatttcaatgagccataaattatcaaaaatagaaaaaaaaattattttc
cggccggccgcatgataacttttttccttcacccgcattccggaaacaaa
acattttttatcattcgccttattttaatcatttatgaaaaaactttaac
tttgagccctttttttaaagagagcTGAACATCAAATGAGTGGAGGAAAG
GAAAATTGGATAAATGCAGATGAAAACATCCAGGTTATATCTAAGCTTAT
TGGTTTTattctcttttaaaaaatttcatttgataatgtttagcaaaaaa
agtttttattaacAAACAATCTGTTTCTTTTCCATGCATTCAAAGGCATT
CTTTGTcttatttattgaattttgagcCTTTTTTATCTAAGATGACTGAT
CACCAAATGGAccaagaaagtgaaagtgagaTAACTCCagatgaagaaat
tgaagacATCGAGGTTATTACCCACCTTTTATTCTTTTCTTGTCAAAGTT
ATTTATTGTTTAGAAATAGGCAATATTTCTATCATCGCGTTGAGGAAGAT
ATGGCTGACCATGAGCTTGGTGAACTAAACATCTAGCACTCAATGAGAAC
TgacataaaaaagcaaaaataattaatCTCATGTTTCATGCTTTAGAGGC
ATATTTTATGTTGACAAGAGGCAGGCAATTTGAGTTCAATATCTCATGCA
CATACAAAAGCATTaattaattttgcatttttaagaCCACTGGAGCACGA
AAAAGATTCAGATGGACAATCAAAGAGGATCCTTCAAAAGAcggcaaaca
aaaacaaattgacAGGCTCAAAGAGTAAATGCAAGCCAAGCTTATACAAT
CGACTTactcaaagaaaaaaatgcttCTTTGACTCTGCGAAATGCTAATT
ACACGCATTTGAGAATGCTCGAGCAGTTAGGAGAAACACGCTCTTCGTTA
ATGGTAGACGCCTCCCTTTTCTCCAACTCCTTTCATTCTGGTGATGCCAT
CTTACAGCAGCAAAGTTCAGATATTCTAGACCCTTCGACTTTTCAGGATT
TAGCAGTAAAAATATTACCCTGTGGTACTTTTTCTTCCATCAAAAAATTA
TCCTTTTCAACCAAAGAATCTGTAATATTGAAAACTCTGAAACCAGATAG
TTTTGGTCTCCAAAGCTTAGCTGTTTTGAGTCATGAACATCGTCTCTTGA
AATTTGTTGGAACTCACTCAAATATAGTTTCAACACTTGGTTTGGTAAAT
TCAAATGGGTCGTTCTCTCATGTTATGAGTTTTGAGATTGGTATGACTTT
GTTTGAAATGACTCAAAAATCTATTTCACTCAGTTCGCTTGCAGAATTCA
AATCCATTATTGAAGGTGTTGCAAATGGACTGAACTTTTTATTCGAAAAA
GGTGTTATACACAACCATCTTGTCCCTGAAAATGTGATTGTCAGGGAAGG
ATTTCTAAAATCATTGGATTCACTTTGCTTGTAGGGtatattcttgtaaa
aaaaacattcaaaatgtgCTCTGCAAGTTCGAAGATGCGAATCACTTGGC
CCCAGAATTATATCATGGTTCACCTGTGAGCTTTTATTCGGATGTTTATG
CATTTGGTATGTTGCTGATGAAGATGTTAGAAATGAAATTTGCCTTCACC
ATGAACACATTCTTCAGATCAAGGGTAGATTGCTATGCTGATAGCTGTAT
GTATACTGCAGACTTGAGACCACCGCACAAATTTTTAGCTTCAAAAACGA
AACAAATGCTGTACTATAAGATTTAGTAActtgttttttgtaagaatcat
ACTTACACATTTAGGATCATTTCTACATAACACCAagtatttcatttttc
a Coding sequence (CDS) from alignment at sc0000005_pilon:2581856..2585406+ >MSTRG.1119.1.p1 ID=MSTRG.1119.1.p1|Name=MSTRG.1119.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=570bp|location=Sequence derived from alignment at sc0000005_pilon:2581856..2585406+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCGAGCAGTTAGGAGAAACACGCTCTTCGTTAATGGTAGACGCCTC
CCTTTTCTCCAACTCCTTTCATTCTGGTGATGCCATCTTACAGCAGCAAA
GTTCAGATATTCTAGACCCTTCGACTTTTCAGGATTTAGCAGTAAAAATA
TTACCCTGTGGTACTTTTTCTTCCATCAAAAAATTATCCTTTTCAACCAA
AGAATCTGTAATATTGAAAACTCTGAAACCAGATAGTTTTGGTCTCCAAA
GCTTAGCTGTTTTGAGTCATGAACATCGTCTCTTGAAATTTGTTGGAACT
CACTCAAATATAGTTTCAACACTTGGTTTGGTAAATTCAAATGGGTCGTT
CTCTCATGTTATGAGTTTTGAGATTGGTATGACTTTGTTTGAAATGACTC
AAAAATCTATTTCACTCAGTTCGCTTGCAGAATTCAAATCCATTATTGAA
GGTGTTGCAAATGGACTGAACTTTTTATTCGAAAAAGGTGTTATACACAA
CCATCTTGTCCCTGAAAATGTGATTGTCAGGGAAGGATTTCTAAAATCAT
TGGATTCACTTTGCTTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:2581856..2585406 + |
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