MSTRG.11184.1.p1 (mRNA) -

Overview
NameMSTRG.11184.1.p1
Unique NameMSTRG.11184.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000080_pilon:756144..757542+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11184.1.p1 ID=MSTRG.11184.1.p1|Name=MSTRG.11184.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1399bp|location=Sequence derived from alignment at sc0000080_pilon:756144..757542+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATAAAAGCGCTTGCAATTTATCAAAGTTTACGATCTCATTTTGGgaa
gaactttttgaagaaagGAAGAATGTTTAGTTTTACGATGTTTTTGGTTA
TCTTTCTGGCGATAATACAGATAGCTTCATCCAATAACGGTAAGAAAAGA
TTTCCCAAGGATTGGCTTATTTGCttgttttcagtggggacaaaaatggg
aggttaattttccaccggggatattttgcccaatttttccagtgaaaAGG
GGTCTAagtgggtctgcgagaagggagtgtatcagaagacattgcaatag
tgcatatcatgaacaGCAGTTTTATGTCTGTACTTACAAATGACTCACTC
TTTTCATAGCTATGAAGCAGTTGGCAGAGAAATATGCACCGCTTATCCGA
ATGGCTAAAGGCGATCCATGGAGACCATCATCAGTTGAATTCTTCTTAAA
ACATACAAAACTAACTGGTAACATCAATCAAGCACACGTCACAACATCAA
ACCTACCGAAGTGTCCACAAAGAGGATGTTATTTAACCACCAAACAAAAC
ATGAATAAAGATACGACATCAAACCTCCCAGTTTTCTACGGAGAGCCTTT
AGACAAGGCTCCAATCTACGCGTTCCATGAAACCACGCCCACTGAAATCA
TCATTGATTATTACACGTTTTATCCGTACAACCGTGGTAAAACCATTTGT
ATTGGTATAGCTGGGAGCGGTAAATGTGAGAAAAGAGTCTGGGGTGTTTG
TATATTTTACTCTCCAAAATGTGCTGGCTATGCTAAATCATTTGGTCACC
ACGTTGGGGACTGGGAAGGAATCAAGATTGTGTTCCATGCTAACAGATCA
CCAAAATATATCCAGTTCAGAGCTCATGGAACCAAATACACATTCAACTA
CCAAAATGGCAATTTCATACGAAACGGTGAATCAATACGTTTCCATGGTA
ATCACCCTATTGTTTACTCTGCATGGGGATCGCATGGCGCTCGCATCACT
GCAGGATCACATGTTTATCAAACCATACCTGTGAACAACAAATTGACCGA
TGTAACAAGCGACGGCCCCGCATGGCACACCTGGCGAAACGTGGTTCTAA
TCCAAAAGAAGAAAGTTGGAGAATATACAGGGAACGAAAGTTGGGTCAAT
TTCCGTGGCAGATGGGGCAACAAGAAACGTTCCTGTGACTTCTGGGAAAG
GATTTCCAACGAATGTGTCCAAAATAGCGGACCAGGAGGGCCATACTAAC
TTTCAAGATGTATTACAAAATGTGATAGTTTATTTACGATTCCAACGACT
TTGTACaatttaaggagacattcgagttatgtaCGTTTTATTGCTGtatt
tcttcgttttcttctttaaattttgaaataagactCCAAAAACAAACGA

Coding sequence (CDS) from alignment at sc0000080_pilon:756144..757542+

>MSTRG.11184.1.p1 ID=MSTRG.11184.1.p1|Name=MSTRG.11184.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000080_pilon:756144..757542+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATAAAAGCGCTTGCAATTTATCAAAGTTTACGATCTCATTTTGGgaa
gaactttttgaagaaagGAAGAATGTTTAGTTTTACGATGTTTTTGGTTA
TCTTTCTGGCGATAATACAGATAGCTTCATCCAATAACGCTATGAAGCAG
TTGGCAGAGAAATATGCACCGCTTATCCGAATGGCTAAAGGCGATCCATG
GAGACCATCATCAGTTGAATTCTTCTTAAAACATACAAAACTAACTGGTA
ACATCAATCAAGCACACGTCACAACATCAAACCTACCGAAGTGTCCACAA
AGAGGATGTTATTTAACCACCAAACAAAACATGAATAAAGATACGACATC
AAACCTCCCAGTTTTCTACGGAGAGCCTTTAGACAAGGCTCCAATCTACG
CGTTCCATGAAACCACGCCCACTGAAATCATCATTGATTATTACACGTTT
TATCCGTACAACCGTGGTAAAACCATTTGTATTGGTATAGCTGGGAGCGG
TAAATGTGAGAAAAGAGTCTGGGGTGTTTGTATATTTTACTCTCCAAAAT
GTGCTGGCTATGCTAAATCATTTGGTCACCACGTTGGGGACTGGGAAGGA
ATCAAGATTGTGTTCCATGCTAACAGATCACCAAAATATATCCAGTTCAG
AGCTCATGGAACCAAATACACATTCAACTACCAAAATGGCAATTTCATAC
GAAACGGTGAATCAATACGTTTCCATGGTAATCACCCTATTGTTTACTCT
GCATGGGGATCGCATGGCGCTCGCATCACTGCAGGATCACATGTTTATCA
AACCATACCTGTGAACAACAAATTGACCGATGTAACAAGCGACGGCCCCG
CATGGCACACCTGGCGAAACGTGGTTCTAATCCAAAAGAAGAAAGTTGGA
GAATATACAGGGAACGAAAGTTGGGTCAATTTCCGTGGCAGATGGGGCAA
CAAGAAACGTTCCTGTGACTTCTGGGAAAGGATTTCCAACGAATGTGTCC
AAAATAGCGGACCAGGAGGGCCATACTAAGAAATAAAAGCGCTTGCAATT
TATCAAAGTTTACGATCTCATTTTGGgaagaactttttgaagaaagGAAG
AATGTTTAGTTTTACGATGTTTTTGGTTATCTTTCTGGCGATAATACAGA
TAGCTTCATCCAATAACGCTATGAAGCAGTTGGCAGAGAAATATGCACCG
CTTATCCGAATGGCTAAAGGCGATCCATGGAGACCATCATCAGTTGAATT
CTTCTTAAAACATACAAAACTAACTGGTAACATCAATCAAGCACACGTCA
CAACATCAAACCTACCGAAGTGTCCACAAAGAGGATGTTATTTAACCACC
AAACAAAACATGAATAAAGATACGACATCAAACCTCCCAGTTTTCTACGG
AGAGCCTTTAGACAAGGCTCCAATCTACGCGTTCCATGAAACCACGCCCA
CTGAAATCATCATTGATTATTACACGTTTTATCCGTACAACCGTGGTAAA
ACCATTTGTATTGGTATAGCTGGGAGCGGTAAATGTGAGAAAAGAGTCTG
GGGTGTTTGTATATTTTACTCTCCAAAATGTGCTGGCTATGCTAAATCAT
TTGGTCACCACGTTGGGGACTGGGAAGGAATCAAGATTGTGTTCCATGCT
AACAGATCACCAAAATATATCCAGTTCAGAGCTCATGGAACCAAATACAC
ATTCAACTACCAAAATGGCAATTTCATACGAAACGGTGAATCAATACGTT
TCCATGGTAATCACCCTATTGTTTACTCTGCATGGGGATCGCATGGCGCT
CGCATCACTGCAGGATCACATGTTTATCAAACCATACCTGTGAACAACAA
ATTGACCGATGTAACAAGCGACGGCCCCGCATGGCACACCTGGCGAAACG
TGGTTCTAATCCAAAAGAAGAAAGTTGGAGAATATACAGGGAACGAAAGT
TGGGTCAATTTCCGTGGCAGATGGGGCAACAAGAAACGTTCCTGTGACTT
CTGGGAAAGGATTTCCAACGAATGTGTCCAAAATAGCGGACCAGGAGGGC
CATACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11184MSTRG.11184Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11184.1.p1.exon1MSTRG.11184.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11184.1.p1.exon2MSTRG.11184.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11184.1.p1MSTRG.11184.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000080_pilongenomesc0000080_pilon:756144..757542 +