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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:738765..744012- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11181.2.p3 ID=MSTRG.11181.2.p3|Name=MSTRG.11181.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5248bp|location=Sequence derived from alignment at sc0000080_pilon:738765..744012- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAATATGGAAGAGAATAATTTAAAACACAAAATCATGGATAATTTTG
CATCTTTGAGCAGGCATCCTGGTTCATCACCCTGCCCAAAACGTTTACCT
CCAAAGGTTAAATTTCTATCTAGATTCTATATTTCTTGAACAAGTCTTTT
TAATTACTAAATGAAAATGTGAAAACCTCAAAAAGCTGTAAGCTTAGTTC
GGGTTTTGATTGATGAATTTTTCATTGTTTGTAACTTTCTTTCACAAACT
TTGAACCTCTGATGTAAGCAAACTTGTAAACTACCTCAGATTTTTGAGTT
TTTATCGGGGTGCAACAACGTCAAACATTTAACAATTGTCTGAGTTTTTT
ATACTGACACTCTCACAGGTGTATACTTTTATAATTCACTCCTTTTGACA
TCCACCCTAAAGCGAACTAAAACCAAACTGTTTGTCAAATTAAGGTTGAT
ACTATGTTTCCCAAACTACTTTCAGCCACCACCAAACTTCAAGAGAAGGA
AAATAGAAGCTCCCCAAGGAATGCATGGGCAAATGGTAGATGACTTCCTC
AAGAAGACGCCATTAGAAGAAGAGCGAGCAGCTGGGATGACATTACGCTT
AACTCATCATCGTATCCAAGGTACTTTGGAACCCAATGTTGCAGATTTCA
CTGTGAGAGAAGTGTGTCAGGAAGCTCATAATAGACCCATGAGGCACATC
CATTTCACCAATATGGAGATTGACAATCAGAAGCATCCAGAGAAACCATG
TCCTATTGTTGACCCTGGGTTAAAAGAGAGCATTGATGATTTGGCATTTG
GTGCAGTTGATTATGCGAAAGAAGTGCGATTCATGAAAAATGATCCCAAA
CAACGGTATTTGTATTGGAATTATTTTGAAAAGAAATTAACTAGAAAGTA
ACTAATTAGTTTTCATTGTGTTTCATGTTTGCGCCTGCCATTTTATACTA
GCCAGAAATAACGTTATCAAAATGTCAAAACATGAGTTGTTTTTATGAAA
TATTTTTTAATTTTGGTATTTAATATTACTGTATACAAACTATAGGCGTA
CAAAGTTTCGCGATCAGAAACTTTCGCGATTTTCACGAATTTTGGCCTTT
TTCGCAAAAGTAAATGTCTTTGAGAATTCTTAACAGGGCAATTCGCGAAA
GTTTATGCTTGCGAAAAATTCTCAAAAAAAGTGGAAATCTATAAAACCTT
GAAATCGTAATAAATATCAAAATTTCCGCATTATCCTTTAATGCCTGTTT
AAAGTCGAAGAGCAACCATTTTTATCAGATTTAAGGAATATTTTTCATTT
TTAAGGCAATCTTCATTCGAAAATCCTCATTTTTATCCAACGATTCGCGA
AAGTTTATGCTCGCGAAAAACATTTTTTAATCAAATTTGCGAAAGTAAAT
GTCGTGAATTTCGTGATTTTTCGTCCTCGCGAAAGTTTCTGATCGCGAAA
GTTTGTACGCCAAAAGTATTTGTAACAAGTTTCTTTCACAATAGAGCTCT
ACACTGAAAAAGACGAAACTGGCAACACTTGGATGGTCGCTAAACATAAA
ACTTCAGAAGACACGATTAAAGAGCAAATAAAACAAGTATCAAAGCTATA
CTGTCACTTTGTGATATTCAGACAGAATGTTGACCCTTATGACATTGTAA
CTACACTCTGTCGAAAATTGCATTTTCAAAGACATGATTTTTCTTTACCC
ACAAAATTGAATTATCAAAATTCAACCATGGTACAGAAAGTCTCCGTTAG
ATTCAAACCAAGCGATTCTAGAGACCGCTTACTGCAATTGAACAATGAAG
TACAAAATTTTAAAATTGGGAATTGTATTTTGAAAAAACATGGTAGATCT
GGTTCTTTAATTGGGAATCATTTTGAAGTAGTTATTCGCAATGTTTCCAA
CCCTTATGACTATTTTATAGAGGAAGTGTCTGAACATTGGGCTAAGACTG
GTTTTATAAACTATTTTGGATTTGATTACTATGGCAGTGGCAAGGTAAAT
CTAGGTATAGTATGTGTCATTTTTCATTTTTTTCGTGATTTTAATTTAAA
AATTGTTTTATTTCCACCATTTGGTAGAAAGCTAGGAAAAAGGGAGCTTT
CAGGTCGCCCTCCAGCGCCCTCAAATGCAGTCTCATACTTACTTAGTTGA
CAGTCATTGAAATAGTTTAAATAGATTGAAAAAGCAGCTGTTTTTAAATT
CCTTTTTGTTTTACTTTCAGGAAAATTCATGCTACACTGTGCTGATACTA
CTCTGCAAATGAAGCTTCCGAATAGAGAAAGACAATTCCATTTGAAAGCT
TATCAAGCGGTCACTTGGAATAAATTTGCTTCCTATAGAATCAAAGTAAA
GTGTTGTCTTTGAAATATTTTTTATAATAGTTTACTTTGGATGAATGTAG
TATTCTTAAAAATCAACCTAAATTTAGAATTTTTTTTGGACAAATTTCTT
TCATTTTCCTACAGCTAGGGATTTTTCAAATTTTTCTTGCAGGTTCAAAT
TTTCGCGGTTTTGCCAAAAAAACACAAAAAACGCTAAAATTGATCCTCGC
AAAAATTAGTTCCAATAAGTAAGTTTTTCCACGTTTTCTCATGGCTTTTG
TTGATTCTAATCAGTTTTAAATGATTCGAATCAGTCACAGAGCTAATAAC
TTAGAACATTTCATCTTTACACTTCTTGGTCTTCTTTTCAGCAATATGGA
TTACAGCCAATCATTGGTGATTTGGTTTTAACAAAAGGAAAAGGTATAAC
CTAACAATATTTATCTTATTTTTGCCATAAGCTTTCCCTTTTTTATCCTG
GCAATATAAATAACATTAATCTAGTTTGTGGACGTTTGACTGCTTGAATA
CAAAGGAAGTTACTTTAATTAGATAAGAAGGATACAAGTGCTTATGTAAA
ACCTGGTATTTTAACGTAAAACTTTGAGGATTAACAATATTTGAAAACTT
CTCATCCACAGACAGTACTGGAATATCAATCGTCAAATCCATAACTGCTG
AGGATATCAACCAAAAACAATACACTGTTGAACAAGTAGTTTTACCTTAT
CCTGGACACGGGTTGAAGTACCCTGAAAATTTGTGCTTGAATTACATGTC
AAACATCTTGCAACAGGATGGGATAGAATTGATCAATATCCCACGGCGTA
GAGGTGACATGAGTTTGATATGTGGGTATAGGTAAGTATTTCTTCTGACT
TTTGAACTGATCCATTTTCACCAAAAAAAACTCAGGCCTTTGAAAAAAAA
CTTTCATCTGCAAAAAAGAAATTTCACTTGCCAAGCTAATGAGTTTTCAA
TCTTTGAAAGCCAACCTAGCCTTCATTTAGTTTTCAATTTGCCTTGTAAA
TGAAGTTTTTTTATCTTTTTTGAAAGTAATTGGCTTCATCTTTCTGATTA
TATTTATTTCTTTTTCAGACCCATCATTTCAAAGCCTCAAAATGTAGAAT
GGGATCTGGTTTCATACGATGATCCAACTCTTCCATTAATAGAAAACGAT
TATGAACATCTTTTCCGATTAGCTGCTCACAATTTTAAATATAGACAGAT
GAAAATTAAATATGAGGAAGCCGTACGCAAGAAGACTTTAAATGGTGCAA
GTGAGGCCATGTCGAAACCAGATAATGAAGAGTCTGGTACTAGTGGTCTC
GAATGCAAAGAAACTGAAGAGAGTGATGAAGACTTAGCCAAAGGTATTGA
TGTTGACGAGCTTTACCAAGGAATTGGTTTAGAATCTGAAGAACAACCTT
CATCATCTGATGGTTTACCAGAAAAACCACCTTCGTTCGAGTTTAGACCT
CAACTTGGAGTTGAAAATGGACTGTACAAAGCTCTTAGATTGAGATTTAT
GTTAAGCCAGGAGGCATTTGGTACTTCAGCTTTGAGAGAGATTATGAGTA
CTTGCCCACCTTATGATCCTGTCAACGTTTCGCAACCGCCCATACAAAGT
TGTACTGCTCAAACATCGCTGCAGAATCCTATTGCTCCCCTGTTGCAAGT
GTCTACGGCTCAGCCATTGCCTGAAAATCCTCAACCACCATTGCAAAACT
ATACTGCTCCACCATTGCTGATAAATCCTACTTCAACAACACCTCTGCGG
AATCCTACCGCTCCACTAATAGTAAAAAATGCTGTCACTCAACCGATGCA
ACAAAGTCTTACTGTTCTACCACTACTGCAAAATCCCACTGCTAAACCAC
TTTTAATTAATCCTGCTGCTCAACCACTGGTGCGGCCATTAGTGCGGATT
CTTACTGCTCCGCCAGTCCTTCCCACCCCAAGACTGCTACATAATCCTAC
TGTTCAACTGGTTCAACCACTACAGAAAAGCCATAATATTCTACCACTAC
AGCAAATTCCTACCCCTCCACCAAATCTACTAAACCCTATCCAGATTCTT
GTCGCTCAACCACCTCCGCAAAACGCTCCTGCTCCAACACTGCTGCTAAA
TCCTACAGCTCAACCAACTCTACCGAACCCTATCGCTCCACCACCATTGA
GAAACCATATCGCTCCACCATCGCTGCTGAACCCTACCCCTCCACCATCC
CTGCAGAATACTACCCCTTTACCTCCGCTGCAGAGTTCTACAATTCAACC
ACTGATGGACATTTCTACAACTCAACCACCTCTGCGGAATCCTACCTCTC
AACCATCTCTGCGGAATTTTAACAGGCCAACATTGTCACAAAATCCTAAC
AGGCCACTATTTCTACGTAATCCTATCAGACCACCTCTTCTTACAAATCC
TAATGGGCCACCATTACTACCAAACCCTAATGGGCCACCATTACTACCAA
ACCCTAATGGGCCACCATTACTACCAAACCCTAATGGGCCACCATTGCTA
CCAAATCCTAATAGGCCACCATTGCTACTAAATCCTAATGGGCCAGCACT
ACTACCAAATCCTAATGGGCCACCACTACTACCAATTCCTAATGGACCAC
CACTACTACCAATTCCTAATGGACCACCACTACTACCAAATCCTAACGGG
CCACCACTGCTACCTAATCCTAATGGACCTCAACCGCAAAATCTTCCTAT
TCCTGATGAAAGAATATATCTTCAGGATAGGTTTAGTGATGAACTAGTAG
CACCTATAGGTTTTAGTCAACCATCATCAAACCCGCCTTCATTAATGGAA
ATCGAAATAAAAGATCATTTTTACAAATAATACTTCTGTTGTTATAAAGC
CTCTTAATTATCTTGGTTGAAAAATCAACCTGTAAATATGTAAACTGC Coding sequence (CDS) from alignment at sc0000080_pilon:738765..744012- >MSTRG.11181.2.p3 ID=MSTRG.11181.2.p3|Name=MSTRG.11181.2.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000080_pilon:738765..744012- (Clytia hemisphaerica_ch_hm2_pilon)
AGCTCTACACTGACCACCACCAAACTTCAAGAGAAGGAAAATAGAAGCTC
CCCAAGGAATGCATGGGCAAATGGTAGATGACTTCCTCAAGAAGACGCCA
TTAGAAGAAGAGCGAGCAGCTGGGATGACATTACGCTTAACTCATCATCG
TATCCAAGGTACTTTGGAACCCAATGTTGCAGATTTCACTGTGAGAGAAG
TGTGTCAGGAAGCTCATAATAGACCCATGAGGCACATCCATTTCACCAAT
ATGGAGATTGACAATCAGAAGCATCCAGAGAAACCATGTCCTATTGTTGA
CCCTGGGTTAAAAGAGAGCATTGATGATTTGGCATTTGGTGCAGTTGATT
ATGCGAAAGAAGTGCGATTCATGAAAAATGATCCCAAACAACGATGGATA
ATTTTGCATCTTTGAGCAGGCATCCTGGTTCATCACCCTGCCCAAAACGT
TTACCTCCAAAGAGCTCTACACTGACCACCACCAAACTTCAAGAGAAGGA
AAATAGAAGCTCCCCAAGGAATGCATGGGCAAATGGTAGATGACTTCCTC
AAGAAGACGCCATTAGAAGAAGAGCGAGCAGCTGGGATGACATTACGCTT
AACTCATCATCGTATCCAAGGTACTTTGGAACCCAATGTTGCAGATTTCA
CTGTGAGAGAAGTGTGTCAGGAAGCTCATAATAGACCCATGAGGCACATC
CATTTCACCAATATGGAGATTGACAATCAGAAGCATCCAGAGAAACCATG
TCCTATTGTTGACCCTGGGTTAAAAGAGAGCATTGATGATTTGGCATTTG
GTGCAGTTGATTATGCGAAAGAAGTGCGATTCATGAAAAATGATCCCAAA
CAACGATGGATAATTTTGCATCTTTGAGCAGGCATCCTGGTTCATCACCC
TGCCCAAAACGTTTACCTCCAAAGAGCTCTACACTGACCACCACCAAACT
TCAAGAGAAGGAAAATAGAAGCTCCCCAAGGAATGCATGGGCAAATGGTA
GATGACTTCCTCAAGAAGACGCCATTAGAAGAAGAGCGAGCAGCTGGGAT
GACATTACGCTTAACTCATCATCGTATCCAAGGTACTTTGGAACCCAATG
TTGCAGATTTCACTGTGAGAGAAGTGTGTCAGGAAGCTCATAATAGACCC
ATGAGGCACATCCATTTCACCAATATGGAGATTGACAATCAGAAGCATCC
AGAGAAACCATGTCCTATTGTTGACCCTGGGTTAAAAGAGAGCATTGATG
ATTTGGCATTTGGTGCAGTTGATTATGCGAAAGAAGTGCGATTCATGAAA
AATGATCCCAAACAACGATGGATAATTTTGCATCTTTGAGCAGGCATCCT
GGTTCATCACCCTGCCCAAAACGTTTACCTCCAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:738765..744012 - |
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