MSTRG.1118.1.p1 (mRNA) -

Overview
NameMSTRG.1118.1.p1
Unique NameMSTRG.1118.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:2489242..2490749-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1118.1.p1 ID=MSTRG.1118.1.p1|Name=MSTRG.1118.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1508bp|location=Sequence derived from alignment at sc0000005_pilon:2489242..2490749- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTCGTGATTCCAGTGATATTGTGGGCTTCACAAACATTGCACGTGC
CAGTACACCGCTAGAAGTTGTGGCGCTCTTGAATGATATGTACACCAGCT
TTGATGGTATTGCTGCTAATTATGATGTTTACAAAGTCGAAACTATCGGT
GATGCATGTAAGTAAAAAGGCCTTAGAAAGGCTTCCTCGTTTTGGCGAGT
TTAGACAAAATTCCCCACAATTAGTTCTCGCCAAAATAAGCTCTTGCCAA
AAGTAATTTTTTTTCTCGCATTTTTCCAAAATAACCAAATTCATTATTTT
TTGCTCGAAATAAGGCAAAATAGGATGTATTTAGCCTGTCATCGTTGTCA
TTCGTCAAAATTAGTTCTTGCCAATATTAAAAAGTTGACTATTCGCCAAA
ATAAGTTCTCCTCGATATTAAAGATTTTTAAGATTTTTGCTGCTTGCCAA
AATTAGCTCCCTTAATGTAGAACGAAAGTATTGCACGAGGTTCTCTTTCT
CTTTGAAGGCGAATGGGAATTTAGTTCAAATGATGGTAGGATTTGAATGT
TGAAATTTGAATTATTGAGTGTCTTCTATATATTCATTACACACGATGCC
TCCTGAAAGTAGAATGTTAATCTTAAAAGCTTTCACTCACCTCTTTACAA
TAGACATGATTGTCTCTGGATTACCAACACGGAACGGAGATCAACACGCA
GGAGAAGTTTGTACCACTGCTATGGACCTGTTGCATGCTATCGGGTCTTT
TACCATCAGACACATGCCCAAAACCAAAATGCGTCTCCGTATTGGTGTCC
ATACAGGTATGAAACACAACTATCTCTATCTTTTGCCCGCAATGTCCCAG
CGGTTCGCATGATGGCGTGATTTGACATGATATAGGGCAAACATTTTTTG
GCATGAAGAGTGCCGTTTTTTCTCTATTTTTTACATGCTGATAAAGTTTA
GCGATCTTCGTGATCATGATGGCGAGTTCAGAGGGTCCGCTAAGGAGCCT
CCTCAAAATTATAACCAGATGTTGAAATTAAAGGGATAATAAAATAATTC
TTTTCTTTTTCTCGTTACTTTTATAGGAGTTGTTGTGGCTGGTGTGGTAG
GTTTGAAAATGCCTCGATATTGTTTGTTTGGTGATTCTGTCAAAGTAGCC
GAATCTATGGAATCAGGTGGTGCTCCTATGAGAATTCAAATCAGTGAGAC
CACCTTCGAAGTTTTACAACGTTTGGGAGGCTATAAAACCGATTACAGAG
ATGAAGTTGACGTGAAGGGCCATGGTAAATTAAAGAGGTACTGGCTCAAA
GGGAAAGTCGGCTATGATAGAGAACTTCCCGAAGGAGAAGACCCTTAAAA
CATTATACAAAATAGTAAAACTGAAAATATATATTTTTTTTATTCCCTAT
AAATATATTTTAATTTTAATTGCCCTGATTAATTTATTTTGAATTGTAAA
ATTTATGTAAATATTGTTCAAAAAGATATTGAATTTTAGGCTTAGTTTTT
AAATCAAA

Coding sequence (CDS) from alignment at sc0000005_pilon:2489242..2490749-

>MSTRG.1118.1.p1 ID=MSTRG.1118.1.p1|Name=MSTRG.1118.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000005_pilon:2489242..2490749- (Clytia hemisphaerica_ch_hm2_pilon)
GAGTTGTTGTGGCTGGTGTGGTAGGTTTGAAAATGCCTCGATATTGTTTG
TTTGGTGATTCTGTCAAAGTAGCCGAATCTATGGAATCAGGTGGTGCTCC
TATGAGAATTCAAATCAGTGAGACCACCTTCGAAGTTTTACAACGTTTGG
GAGGCTATAAAACCGATTACAGAGATGAAGTTGACGTGAAGGGCCATGGT
AAATTAAAGAGGTACTGGCTCAAAGGGAAAGTCGGCTATGATAGAGAACT
TCCCGAAGGAGAAGACCCTTAAACATGATTGTCTCTGGATTACCAACACG
GAACGGAGATCAACACGCAGGAGAAGTTTGTACCACTGCTATGGACCTGT
TGCATGCTATCGGGTCTTTTACCATCAGACACATGCCCAAAACCAAAATG
CGTCTCCGTATTGGTGTCCATACAGTTTTTTCGTGATTCCAGTGATATTG
TGGGCTTCACAAACATTGCACGTGCCAGTACACCGCTAGAAGTTGTGGCG
CTCTTGAATGATATGTACACCAGCTTTGATGGTATTGCTGCTAATTATGA
TGTTTACAAAGTCGAAACTATCGGTGATGCATGAGTTGTTGTGGCTGGTG
TGGTAGGTTTGAAAATGCCTCGATATTGTTTGTTTGGTGATTCTGTCAAA
GTAGCCGAATCTATGGAATCAGGTGGTGCTCCTATGAGAATTCAAATCAG
TGAGACCACCTTCGAAGTTTTACAACGTTTGGGAGGCTATAAAACCGATT
ACAGAGATGAAGTTGACGTGAAGGGCCATGGTAAATTAAAGAGGTACTGG
CTCAAAGGGAAAGTCGGCTATGATAGAGAACTTCCCGAAGGAGAAGACCC
TTAAACATGATTGTCTCTGGATTACCAACACGGAACGGAGATCAACACGC
AGGAGAAGTTTGTACCACTGCTATGGACCTGTTGCATGCTATCGGGTCTT
TTACCATCAGACACATGCCCAAAACCAAAATGCGTCTCCGTATTGGTGTC
CATACAGTTTTTTCGTGATTCCAGTGATATTGTGGGCTTCACAAACATTG
CACGTGCCAGTACACCGCTAGAAGTTGTGGCGCTCTTGAATGATATGTAC
ACCAGCTTTGATGGTATTGCTGCTAATTATGATGTTTACAAAGTCGAAAC
TATCGGTGATGCATGAGTTGTTGTGGCTGGTGTGGTAGGTTTGAAAATGC
CTCGATATTGTTTGTTTGGTGATTCTGTCAAAGTAGCCGAATCTATGGAA
TCAGGTGGTGCTCCTATGAGAATTCAAATCAGTGAGACCACCTTCGAAGT
TTTACAACGTTTGGGAGGCTATAAAACCGATTACAGAGATGAAGTTGACG
TGAAGGGCCATGGTAAATTAAAGAGGTACTGGCTCAAAGGGAAAGTCGGC
TATGATAGAGAACTTCCCGAAGGAGAAGACCCTTAAACATGATTGTCTCT
GGATTACCAACACGGAACGGAGATCAACACGCAGGAGAAGTTTGTACCAC
TGCTATGGACCTGTTGCATGCTATCGGGTCTTTTACCATCAGACACATGC
CCAAAACCAAAATGCGTCTCCGTATTGGTGTCCATACAGTTTTTTCGTGA
TTCCAGTGATATTGTGGGCTTCACAAACATTGCACGTGCCAGTACACCGC
TAGAAGTTGTGGCGCTCTTGAATGATATGTACACCAGCTTTGATGGTATT
GCTGCTAATTATGATGTTTACAAAGTCGAAACTATCGGTGATGCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1118MSTRG.1118Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1118.1.p1.exon3MSTRG.1118.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1118.1.p1.exon2MSTRG.1118.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1118.1.p1.exon1MSTRG.1118.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1118.1.p1MSTRG.1118.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:2489242..2490749 -