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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:670338..675397- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11177.1.p1 ID=MSTRG.11177.1.p1|Name=MSTRG.11177.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5060bp|location=Sequence derived from alignment at sc0000080_pilon:670338..675397- (Clytia hemisphaerica_ch_hm2_pilon)
CGGACAGTTAGTAGTGTTGACTATTGGACATTTAGTTGATTTTTGGTTAT
TCGATTATCGATTGGTGGTTTATATTATTGTCAAGTTCTTATCGTTTCGT
TGTTGTATTGTTTCGTAATTGGAAGATGAGAATTCGAAATTTTCTTAAGA
AACCGTCAAGAACTAATGCAGTTCTAAAGTTTAAAGGTATGTTTTCGAAT
TCGCCAAGGTTTCCTATTTTAACCAATCAAATTTTGTCAACTAAAACCTG
TCAATATCTAGCTTCAGCAGCAGCGGGGATAAAAATTCCTATTGAAATCG
CATTGGGGATGGAAATGCTATTGTTCCAAAGCAAAAAAACCCAGTGGAGA
GTTTTCGAGTGCAATTTTAAAAATTGAATTTCGAATGAGGATGAAATCAA
AGTCAATTTCCCAGTGAGGCAGAAATTTCATCCAGATTTTCCAGTGGGGG
AGGGGTCTAAGCGGGTCTGTGACACAAGGGTGAATTTGAGAACGTTTTAA
TATAATTTTGGGACTGGTTGATATTGATAGAAAGATCTTCTTTTTATTTA
GGCGGAAGCAGGTCACACAAGGCGGTGATCTTGGATATATTACGTGAGTG
CAGAAGAATCCTTCAAAAGAATAACATGCACATCCCAGAGTGGTTCGAAG
GAACTTCCTTTGAAACAGGTAAGGTGATTTGTGAAATGAATTTTCACTAT
CTTCACTAAACTTCATAAAAAGCCCAAGTCATTTTCCTCAAAGAGGTTAT
TTGAAGAATTACTAAACCTTTTTTCAAGGAAATTCAAGGGTATAATTATG
TTTTCTCTTTTCGAAAGATATCCCTTTCCGATTATCTCACCGTAGAAAGT
TATTACCAAACATTAGTAGAGCATCAGAGATTATTTTTGATTTTTATGAA
GCGAAAAAAGTTCAAGCTAAGTTTTATGAATCTGGAGGAAACATTTCAAA
AATCAGTTAGCTTAGCGAACCTTTTAACTTGGAGCCGTGATGAGAAAGTG
ACACTATTAGACCACTTGAAAGTACTAACTTAAATAGTCTTTGGTTCGTC
TTATCTTTTGAAAAGGAATACATGAACGTCTGGAATCAAGGACAAAAATT
GAAGCTTTTTCATCATATGACCATCGCTACAACTTCTTTTTATTTTCAGG
ATATTTCACAAACGAAGGCCAGTTCGTGGAAAAGAAAAACTGTTTCCCTT
CAAACCACAGTGATGTCATCGCGAAAGTTGCCAAAATTGAAGATGACGGC
AACGTTGTCAAGATTCAAGACCATTATGAAGGATCCTTAACCGGCATCGA
AGAACCTGCTATCAAAACGGGCCAAGATATTGAGCTTCTTTTAAAAGGTG
ATCAAGTTTCAGAACAAATTCAAAATCATATTGAAAGAGAAAATTCTTTA
AAGAAGGAGCTTGACAGAGATCCCGGATATGAATCCGATTGCCAAGATTA
TCATACCCATTCGCAATTCGGGTTATCGCATCTCCTATCAAAAACACAAA
ACCAATCGATTGAGGATTTTGAACCTTGGTTTATGCCAAAGGATGAAACA
GACTTTGAACAAACATCATACTCGATGCTGGGCAATAATAATACCATATT
TGGCGGTAAAAGTGAATTCGGAGCTATCGGTTCACCAATCAAAAGCAACA
ACAACAACAATACTGAAACGCCAATAACGACAAACCAAAAACGACAAAAC
TATTTTGAAGACTTTGCTAATGATGTTTATTCCCATTGGGAGTCAAAGAT
TTGGAAAACTCCATCTGACATTAGCCACTATTTGTAATTTTCATATCATT
TTTATATTTATCTGTATACGTTTTTTTTCTAAGTAATAATTTATAATAAA
GTTTCTCTCCTTGGTAATTACAAAATCGTCAATTAAAAATGTCCCCCAAA
GTCTGAATCTCAAAACTCTGCAAAAAAACCATAGTTTCCAGAGGGGTCAA
GAACCCCTCAGTTAAGAGGGGCCCCCCTCAAGTGGTATCCCCCCTTAGGG
GAAAATGCAGACCCACTTTTAGGAAATCAAAAGATAGTTTGTTTTTCAAT
AAGAAACAGTTTTAAAATTTTTGTACATCATTTTATAAAGAATCCCCTTA
GGTAGGAAGACCTCCCACTGCTTAACTGGCAACCCCCGCTTAGAAAGACT
TCCTGTCTGTGTTTTATCAAAATAGACCCCCTAAATGTAGTGGATAGAAA
CTATGATTACAACTAAATCAAAACTATGGCTTTCATCAGCCTCAAAAGAC
ACCCCCCCCCCCGCCCACGTTCCAAGATATGTTGGCGAGTCACCAGTTTG
CCAAAATAGCCTAATGCACAAAAATTCTACCAAAATTGCTGAAAAAGAAA
AAGTATTTTTTGACAGCACCAAATCTAGCAGCTTCTGACAGCACACACAA
ATGTACAAAAACCACCAGATTATCTAATGTTACTAAAAAGGCTCGCTATT
AAGCCAAAAGCAAAATTGAATAAACCGCTATTTCTAATGTGAATTTTAAA
ACGACAAACGGAATCCTTAGGTAAAATTTAAGGAATTTGATACAATAGAT
TCCAATTTGAGCGCTATCTCATTTTCAATCAAGCTTCTAAATACCTGAAG
AGGCACTATATCTGAAACTTACCGTAAGCGGACAAAGATAAGGGTCTCAA
AATTTTACCCATCCCGGGTAAAAAATTAATCCACTTGAGGTACTATATAA
AGTTGAGCAATTTTTTGTAATGTTGGATGTAAGTACGGTTTGACGAATAA
ATTCCATAAAAAAACCGTAAAAATAGCAATTTCCGGTATTTTCAGTCGGA
AAAAAATATTCGTAAAAATTGAAACCCGTCACATTTTAAACGTGCTAATA
TGTATTTAGAGCGAAAAATCAAGTGTTTGTGTGTGACAAGTGCTAGGTAT
TGATGAAACAAGCTTGCACCCAAAATTTGAGCAAAATTGGAAGAGTGGTT
ATGCTGAAAGTGAGCATTTCAAGTAAGAAACAGTCATGTCTGTAAAATAC
CAACCGCTCACGTGACAAAATTAAACAATTTTCACATTTGTGAAAATTTC
AAGTCAAAAGCTCAAGCAGTTCCTGAGTCCATGCTTCCCCTACTAAAAAA
TAGGAAGAAGATCCTCGAGCAGCGATAATAAAACTGATGTAATGAAAATT
TAATTGACGTCAAATATTTTATTTTTTATTATTTACAATATCTAGATTTA
GATTTTTTAAAGTTTCTAAAGAAATAGTATTTGAGAATCGGACAGTTAGT
ATTGTTGACTATTGGACATTTAGTTGATTTTTGGTTATTCGATTATCGAT
TGGTGGTTTATATTATTGTCAAGTTCTTATCGTTTCGTTTTTGTATTGTT
TCGTAATTGGAAGATGAGAATTCGAAATATTCTTAAGAAACCGTCAAGAA
CTAATGGAGTTCTGAAGTTTAAAGGTATGTTTTCGAATTCGCCAAGGTTT
CCTATTTCAACCAATCAAATTTTGTCAACTAAAACCTGTCAATATCTAGC
TTCAGCAGCAGCGGGGATAAAAATTCCTATTGAAATCGCATTGGGGATGG
AAATGCTATTGTTCCAAAGTTAAAAAACCCAGTGGAGATAGTTTTCGAGT
GCAATTTTAAAAATTGAATTTCGAATGAGGATGAAATCAAAGTCAATTTC
CCAGTGAGGCAGAAATTTCATCCAGATTTTCCAGTGGGGCTGGGGTCTTA
AGTCTAAGTTAAAAAACCCAGTGGGGATAATTTTCGAGCGCAATTTTAAA
AATTGAATTTCGAATGAGGATGAAATCAAAGTCAAATTCCCAGTGAGGCA
GAAATTTCATCCAGATTTTCCAGTGGGGCAGGGGTCTAAGCGGGTCTGTG
ACACAGGGGTGTATTTGAGAACGTTTAACATCGTTTGGGACTGGTTGATA
TTAATAAAAATATATTTTTTTCTTATTCAGGCGGAAGCAGGTCACACAAG
GCTGTGGTCTTGGATATATTGCGAGAGTGCAGAAGAATCCTTCAAAAGAA
TAATATGCACATCCCAGAGTGGTTCGAAGGAACTTCCTTTGAAACAGGTA
AGGTGATTTGTGAAATGGCTTTTAACTATCTAACAACTATACATGTATCT
CAATACTTCATAAAAGCTCCAGTCATTTTCCTCAAAGAGGAGCACAGAAG
AAAGAATTACTTTAATTGAAATTCAAGGGTATAATTATGTTTCCGTTTTC
GTAGAAGATACCCCTTTCCGATATCTCAATACTTCATAAAAGCTCCAGTC
ATTTTCCTCAAAGAGGAGCACAGAAGAAAGAATTACTTTAATTGAAATTC
AAGGGTATAATTATGTTTCCGTTTTCGTAGAAGATACCCCTTTCCGATAT
CTCAATACTTCATAAAAGCTTCAAGTCGTTTCACCAAAAGGTGATTGATG
AAATGACATTTTTCATTATTAAAGAATTCTTAACTTTTCTAAATCTTTTT
TTTAACTTTAAGGAAAATCAGGGAATTTAGGAAATTCAGGAGTATAATTA
TGTTTCTCTTTTCGTAGGAGATATTCCCTTCCAATTATCATTTCTCAGTA
GAAAGTTTTTACCAAACATTATTAAGGGCTTAAGCGAAAAATGTCATTTC
AAGCTAAATCTAATAAATCTTGAGGAAAAATCTCAAAAATCTGGTAGCTC
TGGTGAGAAAGTTGGCCTTATCTTTTGATAACATTTGTATAAATGTCTGC
AAAACATAGTTAAGCTTTTTTATCATTTTGACCATCGTTACCACTTTCAT
TTTCAGGATATTTCACAAGCGAAGGCCAGTTCGTTGAAAAGAAACACTGT
TTCCCTTCAAACCACAGTGATGTCATCGCAAAAGTTGCCATAATTGAAGA
TGACAGCAAAGTTGTCAAAATTGAAAATGACAGCAAAGTTGTCAAGATTC
AAGATCATTATGAAGGATCCTTAACCGGTATCGAAGAACCGGTCATCAAA
ATAGGTCAAGATATTGAGCTTCTGCTGAAAGGTGATCAAGTTTCAGAGCA
AATTCAAACTCATATTGAAAAAGAAAATTCCTTTAAGAAGGAGCTTAGCA
GTGATCCCGG Coding sequence (CDS) from alignment at sc0000080_pilon:670338..675397- >MSTRG.11177.1.p1 ID=MSTRG.11177.1.p1|Name=MSTRG.11177.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1812bp|location=Sequence derived from alignment at sc0000080_pilon:670338..675397- (Clytia hemisphaerica_ch_hm2_pilon)
GTGATCAAGTTTCAGAGCAAATTCAAACTCATATTGAAAAAGAAAATTCC
TTTAAGAAGGAGCTTAGCAGTGATCCCGATATTTCACAAACGAAGGCCAG
TTCGTGGAAAAGAAAAACTGTTTCCCTTCAAACCACAGTGATGTCATCGC
GAAAGTTGCCAAAATTGAAGATGACGGCAACGTTGTCAAGATTCAAGACC
ATTATGAAGGATCCTTAACCGGCATCGAAGAACCTGCTATCAAAACGGGC
CAAGATATTGAGCTTCTTTTAAAAGGCGGAAGCAGGTCACACAAGGCGGT
GATCTTGGATATATTACGTGAGTGCAGAAGAATCCTTCAAAAGAATAACA
TGCACATCCCAGAGTGGTTCGAAGGAACTTCCTTTGAAACAGATGAGAAT
TCGAAATTTTCTTAAGAAACCGTCAAGAACTAATGCAGTTCTAAAGTTTA
AAGGTGATCAAGTTTCAGAGCAAATTCAAACTCATATTGAAAAAGAAAAT
TCCTTTAAGAAGGAGCTTAGCAGTGATCCCGATATTTCACAAACGAAGGC
CAGTTCGTGGAAAAGAAAAACTGTTTCCCTTCAAACCACAGTGATGTCAT
CGCGAAAGTTGCCAAAATTGAAGATGACGGCAACGTTGTCAAGATTCAAG
ACCATTATGAAGGATCCTTAACCGGCATCGAAGAACCTGCTATCAAAACG
GGCCAAGATATTGAGCTTCTTTTAAAAGGCGGAAGCAGGTCACACAAGGC
GGTGATCTTGGATATATTACGTGAGTGCAGAAGAATCCTTCAAAAGAATA
ACATGCACATCCCAGAGTGGTTCGAAGGAACTTCCTTTGAAACAGATGAG
AATTCGAAATTTTCTTAAGAAACCGTCAAGAACTAATGCAGTTCTAAAGT
TTAAAGGTGATCAAGTTTCAGAGCAAATTCAAACTCATATTGAAAAAGAA
AATTCCTTTAAGAAGGAGCTTAGCAGTGATCCCGATATTTCACAAACGAA
GGCCAGTTCGTGGAAAAGAAAAACTGTTTCCCTTCAAACCACAGTGATGT
CATCGCGAAAGTTGCCAAAATTGAAGATGACGGCAACGTTGTCAAGATTC
AAGACCATTATGAAGGATCCTTAACCGGCATCGAAGAACCTGCTATCAAA
ACGGGCCAAGATATTGAGCTTCTTTTAAAAGGCGGAAGCAGGTCACACAA
GGCGGTGATCTTGGATATATTACGTGAGTGCAGAAGAATCCTTCAAAAGA
ATAACATGCACATCCCAGAGTGGTTCGAAGGAACTTCCTTTGAAACAGAT
GAGAATTCGAAATTTTCTTAAGAAACCGTCAAGAACTAATGCAGTTCTAA
AGTTTAAAGGTGATCAAGTTTCAGAGCAAATTCAAACTCATATTGAAAAA
GAAAATTCCTTTAAGAAGGAGCTTAGCAGTGATCCCGATATTTCACAAAC
GAAGGCCAGTTCGTGGAAAAGAAAAACTGTTTCCCTTCAAACCACAGTGA
TGTCATCGCGAAAGTTGCCAAAATTGAAGATGACGGCAACGTTGTCAAGA
TTCAAGACCATTATGAAGGATCCTTAACCGGCATCGAAGAACCTGCTATC
AAAACGGGCCAAGATATTGAGCTTCTTTTAAAAGGCGGAAGCAGGTCACA
CAAGGCGGTGATCTTGGATATATTACGTGAGTGCAGAAGAATCCTTCAAA
AGAATAACATGCACATCCCAGAGTGGTTCGAAGGAACTTCCTTTGAAACA
GATGAGAATTCGAAATTTTCTTAAGAAACCGTCAAGAACTAATGCAGTTC
TAAAGTTTAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:670338..675397 - |
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