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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:690863..694362+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11176.7.p1 ID=MSTRG.11176.7.p1|Name=MSTRG.11176.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3500bp|location=Sequence derived from alignment at sc0000080_pilon:690863..694362+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaagtaccattttgggagaatctttggtatgactcgCCCGAGGGTCGAG
cccacaaccttgtgcaccgtagttggatgctctaccttcatgctacggtt
gCTACTGAATCTCTGAATCTATAATAACAGTGTTTAAAGCTCATCCGAAC
TAAAGATTTCGAGCAAATTCGTATTATCTACAAAAGCTGTCTGAACTAAG
TTCAAACCCTGCTATAGGTAtatatgccctccgatgcatcggaatgggtc
ctacccacgatggaTTAGGAATgacagcgcaagcagacattaCAACCCTG
CAGATGtgagctgccgagccatggcgtataccatgacactcgaactacac
gggagaacgggtgtcctcgcaggtgtagaaccgCCTAAGTGTAtcagcac
accacaatgtctagAATAtttacccatactcttgtatcagagttatgata
ccctattcccctcacatggcgtTGAGTTaacccgggcgaaggagcattca
cttgacaagtgaatcgtagtgtcGCTGTGAGTATCGAACTCTAGCCTTct
ggacagaagtcaagcacgataaccactataccatttatgccttgctttga
ccactgaaaAAAGAACATTTCGGATATGATGTATTTCTTGTTGTAGGTTG
AAAAACAGATGGAGAAAAGTCAACAACCAGTATTGAACAACATTCAAATC
TTATGGAAACAACATGAAAACGAGGCTCCCAAACCTCTACAGGTAAATGT
TATTGTCAACTTCAAAACTCTatctccaatttttttttccatataCCACT
ATTGACGCCATTAAAACTCTGCGTATATGTAACGGATGACAACTTCGGCT
GATAGatcagcgtccgagattcaaaaaaggccttaaacAGGTTTTCGTAT
GGCgtcccttagatcagggcaaattttttttcacctgcagttttcgagtg
aatcgatttttagtgaATCGGtaacggattgtatctagcggttctttTGT
TCTTGAGGACggcactttttgaaatttagcgatagattttactttcaatc
tggcgtttgtgtaaaatccaaaagtttctactctagcccctttggggctt
gaaactcaattgTCCATTTATTAGGCAccttagaaaattttttatattcC
AGGCACCGCATCAAATCAATGCTTTATTCAACGGATCAAGACTTGTGGTT
TACGGATTTGTTCCCTATTGTACCATGGTAGGtaattttgataataaaaa
aaatcgtcGGATTATTTTAAGCAGCGCATTATTGTCTTTTAGATGTTTAT
TGACACTGTCTATCTGATAAAGCGTTGAATATACGACGGGCAAGGTTGAA
CATAGCCTGGATATCAAacctcaaaatttttgaaaaaacatacaacagtt
ctaaaattatagatcttggtctccctagagaatgaaagtgcaaacccatg
tttccaaaactttcctagctAATCCAGGGcagaaaaacagaaattaataa
aaagcagccttacaagatataaaaccatttaaaacttCCAAAAATTACTC
CAGAGTATATAAACAAGTTTGCacgcattatcatgaccaaccatgtcatg
ttttcttggaaaatgaaactTGCCTcactgttttcttctttttcatgttt
tcatgtaacggAAAGCtgtatcttcactagcaagtggagggttatcctat
ttttgtttcagaatcACTCTGTGCCATGTAGATCGGtccttacggtttta
gcgaagtgagcgcaagcaagtggactgcattctcatatgagaatgtaaaa
cgctctagggagaccaggctgtaaaccagaacataaaatatgaaaaacta
gactgtgaaatagtctACAGCCTGGATATTCAAGCTAGGTTGAACATAAG
CATTGAGCATAAGTGGTGAGTGTTGGGGAGATATgggtttgacggtgtga
cggtatttTGGTGATGAATATACCACGAGGTGACAAATCAAAGGTTTCAA
TCTTTGACGATAATTTgcaaagaattgtcatttctgtGTTGTCAAACGAA
ATGAAAGCAATTATATTGCTAATTATTGGGTATAGCGTTATTTTTAACCA
TTTGAATagcttttcattttatttcaaaacgaTACAAAACCGCCATATGT
GAGCCGTATGTTaacctagaaatctaagctagtttgatttaGTCACTAGG
ATAAAACTGATGGTAAGCTCTGACTGAATAACTATCCCAACAGTATTCCA
AGgtaaacttaaaatccgtaaatataaaaaaatataaaaaagcccgaaaa
GCTATGTTGCcattagccgtgtgtcctagccttgtgaatacgtgCTTAGT
TTACTAGGCTAAAACCGCATGATAAGTTTCAGTACAACTTTGGACTTATT
GTAAATCGATTTCATATTTCATACTCCTCCAGGCGTATCTTTCATCAACA
GTGAATGGCAAAGAAGTCAACACCATGGTTTCTACGACCGAATTGAATAC
ATCTACTGGACTTGTGAGTTTTAGATAGCTTTCAAAGGTTCTTTTAATAT
CTTATTAAGAAGTAAGCACCGTATAAAATTTATAGTTTATAGCACGAAAG
AATACAAGTCTGTTTTCTTCTATCTGCCGAAAGTGCTCAATGGTATCAGA
Gcttgttcaaattaaaagaaagaaactttgatttattgtttagaattttc
attttcataccgcccgtatggacgacaatcatctttttaactttatttct
tttttcttcatttttcatcttcattttctgaattatttttcttaaaaatt
atagTGCTACGAATTAtctttttaaggctttgtttttaaataagagtgat
atcgtttgctttcATCAATTTAAATTCACAACCTTTTTCACATTgcattg
acacggatgtggagcaagattggccagaacGAGGaaaagataaacatttt
tttgcttatatcagcataatataacaataggtagacactgtcctgatatg
aaatatgtgtctgatatatgaaacgggaacacttatgtaaaaataaagcc
TTTAACGGTATTTTATGATATGTGAGGATTGaagtattgggctcttccag
aaaaaaattaaatattgggggttgaggatataacattttttggggATTTA
CTCCCGGATTTTCGACCCCCGGACCaacatcagttgaccccccggacatt
caaaattacccctaaacagagcGAATATGCCcttaaaacaaggcaaattt
tgcagatttttcactacccccggataatatatccaatatatccCCCACCC
CCGATGTAGAAAagttttctggaagagcccattggtCGAAAAATGACAGG
CACAGCAAAGATTAGTGCGCACTTGAAGCAAATGGACTTCAGTTttacat
ttcaatattttttagtCATTCCATCGTTTGACCGCAAAAGCAATCATTAA
cgattttgaaaatggaatattaCATACAGACCGCAGTCAACACGAGGTAT
Coding sequence (CDS) from alignment at sc0000080_pilon:690863..694362+ >MSTRG.11176.7.p1 ID=MSTRG.11176.7.p1|Name=MSTRG.11176.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1815bp|location=Sequence derived from alignment at sc0000080_pilon:690863..694362+ (Clytia hemisphaerica_ch_hm2_pilon)
tcaagtaccattttgggagaatctttgGTTGAAAAACAGATGGAGAAAAG
TCAACAACCAGTATTGAACAACATTCAAATCTTATGGAAACAACATGAAA
ACGAGGCTCCCAAACCTCTACAGGCACCGCATCAAATCAATGCTTTATTC
AACGGATCAAGACTTGTGGTTTACGGATTTGTTCCCTATTGTACCATGGC
GTATCTTTCATCAACAGTGAATGGCAAAGAAGTCAACACCATGGTTTCTA
CGACCGAATTGAATACATCTACTGGACTTtCATTCCATCGTTTGACCGCA
AAAGCAATCATTAAcgattttgaaaatggaatattaCATACAGACCGCAG
TCAACACGAGGTAtcaagtaccattttgggagaatctttgGTTGAAAAAC
AGATGGAGAAAAGTCAACAACCAGTATTGAACAACATTCAAATCTTATGG
AAACAACATGAAAACGAGGCTCCCAAACCTCTACAGGCACCGCATCAAAT
CAATGCTTTATTCAACGGATCAAGACTTGTGGTTTACGGATTTGTTCCCT
ATTGTACCATGGCGTATCTTTCATCAACAGTGAATGGCAAAGAAGTCAAC
ACCATGGTTTCTACGACCGAATTGAATACATCTACTGGACTTtCATTCCA
TCGTTTGACCGCAAAAGCAATCATTAAcgattttgaaaatggaatattaC
ATACAGACCGCAGTCAACACGAGGTAtcaagtaccattttgggagaatct
ttgGTTGAAAAACAGATGGAGAAAAGTCAACAACCAGTATTGAACAACAT
TCAAATCTTATGGAAACAACATGAAAACGAGGCTCCCAAACCTCTACAGG
CACCGCATCAAATCAATGCTTTATTCAACGGATCAAGACTTGTGGTTTAC
GGATTTGTTCCCTATTGTACCATGGCGTATCTTTCATCAACAGTGAATGG
CAAAGAAGTCAACACCATGGTTTCTACGACCGAATTGAATACATCTACTG
GACTTtCATTCCATCGTTTGACCGCAAAAGCAATCATTAAcgattttgaa
aatggaatattaCATACAGACCGCAGTCAACACGAGGTAtcaagtaccat
tttgggagaatctttgGTTGAAAAACAGATGGAGAAAAGTCAACAACCAG
TATTGAACAACATTCAAATCTTATGGAAACAACATGAAAACGAGGCTCCC
AAACCTCTACAGGCACCGCATCAAATCAATGCTTTATTCAACGGATCAAG
ACTTGTGGTTTACGGATTTGTTCCCTATTGTACCATGGCGTATCTTTCAT
CAACAGTGAATGGCAAAGAAGTCAACACCATGGTTTCTACGACCGAATTG
AATACATCTACTGGACTTtCATTCCATCGTTTGACCGCAAAAGCAATCAT
TAAcgattttgaaaatggaatattaCATACAGACCGCAGTCAACACGAGG
TAtcaagtaccattttgggagaatctttgGTTGAAAAACAGATGGAGAAA
AGTCAACAACCAGTATTGAACAACATTCAAATCTTATGGAAACAACATGA
AAACGAGGCTCCCAAACCTCTACAGGCACCGCATCAAATCAATGCTTTAT
TCAACGGATCAAGACTTGTGGTTTACGGATTTGTTCCCTATTGTACCATG
GCGTATCTTTCATCAACAGTGAATGGCAAAGAAGTCAACACCATGGTTTC
TACGACCGAATTGAATACATCTACTGGACTTtCATTCCATCGTTTGACCG
CAAAAGCAATCATTAAcgattttgaaaatggaatattaCATACAGACCGC
AGTCAACACGAGGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:690863..694362 + |
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