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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:11464..14131- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11132.2.p1 ID=MSTRG.11132.2.p1|Name=MSTRG.11132.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2668bp|location=Sequence derived from alignment at sc0000080_pilon:11464..14131- (Clytia hemisphaerica_ch_hm2_pilon)
GAACTAATGACATCATTTGTTTACATTTGGTCACAAGACACGAGCGATTA
TGATTTCGCATGCAGTCTTTTGAATGCAACTCATTGTAAAATGTTTATAA
AACAGAGTTATAGCAAAGTTTGAAATAAATTCCTTGTAAGTTTTCTAGTA
AACGTAAATCGAGAAAAGGAATAAGAGAAACAACACAAGAAATAACATCA
CTGAATTCAACATGTTCAAGAAAAGTATTCATTCGTCATCTAAACCGAAA
ACTACCAGATTGACAACAACAACTGCTGCAGCTGCTACTGCTAGTACAAC
GAATTCACCCGCTATAAAGTAAGTAACTTTTGAATTTTGCGCAATTATGC
GTGAGAGAGTTTATGTTCAAACTTAATTTTGAATTTATCTGATTTGATTC
TCGGTAAAGTAACCGACAAGTTTTCGTACTTGACAAAACGAGATGATATC
TGATCAACATGATATTCATTACGTAATGTTTTCTAGGGAAGCACCCCACT
TTTTGCCATTAGTGGCAAATTTTAAAGAAATTTTTCTTTAGCTAATATTT
GCCACTACTGGCAAAAGCAGGGTGTTCCCGTAGAAAGCATATTGTGTCAT
GAATATAAAAAACATAGAGGTTTCTTGATTTTGTTTAGGCTGCACGCATC
CCCTCTGATATGATTTGATAAAACAAAATAAATTCGTGGGATGCGTGCAG
CCTAGATTTTGTTCTGTTCGTTAGTTGAACAATCTGAGCTTTAGAATCAA
TAACTGATATTTTACTACAAATAACTACTATTCTCTTTTTACGTCAGGAT
AACCTTTGTCTCGGCAGTATCAAGTGGCAACTTACAACAAGTCAAATCAG
CCTACAACAAATCCATTAACATCAACAAACAACATCAAGTTGGTCAAACG
CTTTTATACCATGCTGCATTCAAAGGATACACAGATATCGTACAATTTCT
ATTGGACAATGGCGCCGACATGATGATTTGTGACGATAACGGAAATTTCC
CGATTCACACGGCGTGTAATAAAGGACAAGTCCGATGTGTCGAACTTTTG
ATCAAGAAGGGTGCGAACGTTGATTTATTGAACAGAAAGAATCTAACACC
GATGCATTTTGCTGTATGCGGAGACCAATACGAAACCGCAAAATTGCTCC
TCAATTACGGCGCCAATGTGAATTCGCGAAACAAAAATAATGTTGGATAT
TTGTATTTTGCCAGTTCCCATGGCAACCTACAAATGGTGGAATTATTGTT
ACAATGTGGCGCCATTATTGATATTCCAGGGCGTACTGCTTCTAATTCCG
CCCTACATGTGGCGTCAACGAAAGGACATTATAAAGTCGTTTCTTGTCTC
ATTAACCATGGTGCTTCGTTGAGTCTTAAAGGCGAAAAATTTTCAGCCTT
GTTCAGCGCTATTCATCATAAACGGTTGGAAGCTGTTGACGTTTTACTGG
ATGCGGGTGCAGATCCTAATTTCGTGATATCTGGAGTGGAACAGCGACCT
CTTCACCATTTGGCATTCAAATATATCAATGATTTAGATTATATGTCACG
CTTGGTTGACCACGGAGCCGACGTCAACGTCGTTGAGGAGAACGGTTTAA
CGCCTTTACACTTTGCATCCTCTGCTGATAATCTGAGAGCGGCCGAATAC
CTTTTGTCACACGGCGCTGATGCAAATATTAAGTCGAAAAAAGGTTCGAC
AGCTTTGACCGTTGCCAAAACTGAGGAGATGAAAATGTTGTTACGAAAAC
ACACTGATGACCAATCTTCAGCTTCTTCGGCTGTTGAATGTAAATACGCT
GATCCTTTGAACCCTACAAACTTCGCCTTTGCTCCGCCTCAAAGTTTGCC
TTCTGGACCTTTCCAAACTGCCGCTACTGCTCTACCGCAAAATGTTGCCA
GTGCACCTCCTCTTGAAGTGCTGGACACCACCGATGATCACATTCAAAAA
CCAATCCCTTGCTCATTCTCAAAACCACTTGAAGCACTGTTGCAAGAAAA
AGAAGAAGAACTCCTTCTGTTGAAAGAAAAAGCAGTCAACGTCGAATCTG
AAATCGATGATTTAAAGAAACGTATAGAAGCGCAACGAAATCGAGATTTG
GAAGCTACAACTGGTTTCTCATTACCTACAAATCATTTAGAATGTCCTAT
TTGCTTAGAAATTCCATATGCGCCAACCAAAATCTTTCAGTGTGAACAGG
GCCATATTTTTTGTGAAGTATGCAAAGACAAAGGATTGCAATATTGTCCG
GAATGCAGAGTTGAGTTGGATGGGAAATTTATACGGAACCGAAGATTGGA
AGATGTGATCCAAGGGATGACGAGTAAACCAGAGTGAAAAAAAAACTTCA
TCATATTTTTTTTTATTTTTTTTATTTTTTGCTTCATTCATTGTAAATAT
ATCTATGAATAATCAATCATTCTCAAATTAAATTTTAAATGAATGTTTTA
ATTAAAATTTCATTCGAGTATTTGGCTCGTCTAGAAAATTGTTGTACATG
TGGGGTGGAGGATATAGTGTCCGGGGGGGGGTAGTGAATAATATACAAAT
TTTGCCTTGTCCGACGGTAAACTTGTTTTGTTTGGTGGTGATTTTGTTCT
TTAGTTACGATCATGTCAATGTGTTGTTCATTATCCAATCGATTTCTATA
GTATTTTTCATTTACTAT Coding sequence (CDS) from alignment at sc0000080_pilon:11464..14131- >MSTRG.11132.2.p1 ID=MSTRG.11132.2.p1|Name=MSTRG.11132.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3294bp|location=Sequence derived from alignment at sc0000080_pilon:11464..14131- (Clytia hemisphaerica_ch_hm2_pilon)
GATAACCTTTGTCTCGGCAGTATCAAGTGGCAACTTACAACAAGTCAAAT
CAGCCTACAACAAATCCATTAACATCAACAAACAACATCAAGTTGGTCAA
ACGCTTTTATACCATGCTGCATTCAAAGGATACACAGATATCGTACAATT
TCTATTGGACAATGGCGCCGACATGATGATTTGTGACGATAACGGAAATT
TCCCGATTCACACGGCGTGTAATAAAGGACAAGTCCGATGTGTCGAACTT
TTGATCAAGAAGGGTGCGAACGTTGATTTATTGAACAGAAAGAATCTAAC
ACCGATGCATTTTGCTGTATGCGGAGACCAATACGAAACCGCAAAATTGC
TCCTCAATTACGGCGCCAATGTGAATTCGCGAAACAAAAATAATGTTGGA
TATTTGTATTTTGCCAGTTCCCATGGCAACCTACAAATGGTGGAATTATT
GTTACAATGTGGCGCCATTATTGATATTCCAGGGCGTACTGCTTCTAATT
CCGCCCTACATGTGGCGTCAACGAAAGGACATTATAAAGTCGTTTCTTGT
CTCATTAACCATGGTGCTTCGTTGAGTCTTAAAGGCGAAAAATTTTCAGC
CTTGTTCAGCGCTATTCATCATAAACGGTTGGAAGCTGTTGACGTTTTAC
TGGATGCGGGTGCAGATCCTAATTTCGTGATATCTGGAGTGGAACAGCGA
CCTCTTCACCATTTGGCATTCAAATATATCAATGATTTAGATTATATGTC
ACGCTTGGTTGACCACGGAGCCGACGTCAACGTCGTTGAGGAGAACGGTT
TAACGCCTTTACACTTTGCATCCTCTGCTGATAATCTGAGAGCGGCCGAA
TACCTTTTGTCACACGGCGCTGATGCAAATATTAAGTCGAAAAAAGGTTC
GACAGCTTTGACCGTTGCCAAAACTGAGGAGATGAAAATGTTGTTACGAA
AACACACTGATGACCAATCTTCAGCTTCTTCGGCTGTTGAATGTAAATAC
GCTGATCCTTTGAACCCTACAAACTTCGCCTTTGCTCCGCCTCAAAGTTT
GCCTTCTGGACCTTTCCAAACTGCCGCTACTGCTCTACCGCAAAATGTTG
CCAGTGCACCTCCTCTTGAAGTGCTGGACACCACCGATGATCACATTCAA
AAACCAATCCCTTGCTCATTCTCAAAACCACTTGAAGCACTGTTGCAAGA
AAAAGAAGAAGAACTCCTTCTGTTGAAAGAAAAAGCAGTCAACGTCGAAT
CTGAAATCGATGATTTAAAGAAACGTATAGAAGCGCAACGAAATCGAGAT
TTGGAAGCTACAACTGGTTTCTCATTACCTACAAATCATTTAGAATGTCC
TATTTGCTTAGAAATTCCATATGCGCCAACCAAAATCTTTCAGTGTGAAC
AGGGCCATATTTTTTGTGAAGTATGCAAAGACAAAGGATTGCAATATTGT
CCGGAATGCAGAGTTGAGTTGGATGGGAAATTTATACGGAACCGAAGATT
GGAAGATGTGATCCAAGGGATGACGAGTAAACCAGAGTGAATGTTCAAGA
AAAGTATTCATTCGTCATCTAAACCGAAAACTACCAGATTGACAACAACA
ACTGCTGCAGCTGCTACTGCTAGTACAACGAATTCACCCGCTATAAAGAT
AACCTTTGTCTCGGCAGTATCAAGTGGCAACTTACAACAAGTCAAATCAG
CCTACAACAAATCCATTAACATCAACAAACAACATCAAGTTGGTCAAACG
CTTTTATACCATGCTGCATTCAAAGGATACACAGATATCGTACAATTTCT
ATTGGACAATGGCGCCGACATGATGATTTGTGACGATAACGGAAATTTCC
CGATTCACACGGCGTGTAATAAAGGACAAGTCCGATGTGTCGAACTTTTG
ATCAAGAAGGGTGCGAACGTTGATTTATTGAACAGAAAGAATCTAACACC
GATGCATTTTGCTGTATGCGGAGACCAATACGAAACCGCAAAATTGCTCC
TCAATTACGGCGCCAATGTGAATTCGCGAAACAAAAATAATGTTGGATAT
TTGTATTTTGCCAGTTCCCATGGCAACCTACAAATGGTGGAATTATTGTT
ACAATGTGGCGCCATTATTGATATTCCAGGGCGTACTGCTTCTAATTCCG
CCCTACATGTGGCGTCAACGAAAGGACATTATAAAGTCGTTTCTTGTCTC
ATTAACCATGGTGCTTCGTTGAGTCTTAAAGGCGAAAAATTTTCAGCCTT
GTTCAGCGCTATTCATCATAAACGGTTGGAAGCTGTTGACGTTTTACTGG
ATGCGGGTGCAGATCCTAATTTCGTGATATCTGGAGTGGAACAGCGACCT
CTTCACCATTTGGCATTCAAATATATCAATGATTTAGATTATATGTCACG
CTTGGTTGACCACGGAGCCGACGTCAACGTCGTTGAGGAGAACGGTTTAA
CGCCTTTACACTTTGCATCCTCTGCTGATAATCTGAGAGCGGCCGAATAC
CTTTTGTCACACGGCGCTGATGCAAATATTAAGTCGAAAAAAGGTTCGAC
AGCTTTGACCGTTGCCAAAACTGAGGAGATGAAAATGTTGTTACGAAAAC
ACACTGATGACCAATCTTCAGCTTCTTCGGCTGTTGAATGTAAATACGCT
GATCCTTTGAACCCTACAAACTTCGCCTTTGCTCCGCCTCAAAGTTTGCC
TTCTGGACCTTTCCAAACTGCCGCTACTGCTCTACCGCAAAATGTTGCCA
GTGCACCTCCTCTTGAAGTGCTGGACACCACCGATGATCACATTCAAAAA
CCAATCCCTTGCTCATTCTCAAAACCACTTGAAGCACTGTTGCAAGAAAA
AGAAGAAGAACTCCTTCTGTTGAAAGAAAAAGCAGTCAACGTCGAATCTG
AAATCGATGATTTAAAGAAACGTATAGAAGCGCAACGAAATCGAGATTTG
GAAGCTACAACTGGTTTCTCATTACCTACAAATCATTTAGAATGTCCTAT
TTGCTTAGAAATTCCATATGCGCCAACCAAAATCTTTCAGTGTGAACAGG
GCCATATTTTTTGTGAAGTATGCAAAGACAAAGGATTGCAATATTGTCCG
GAATGCAGAGTTGAGTTGGATGGGAAATTTATACGGAACCGAAGATTGGA
AGATGTGATCCAAGGGATGACGAGTAAACCAGAGTGAATGTTCAAGAAAA
GTATTCATTCGTCATCTAAACCGAAAACTACCAGATTGACAACAACAACT
GCTGCAGCTGCTACTGCTAGTACAACGAATTCACCCGCTATAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:11464..14131 - |
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