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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:1233126..1237506+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11122.1.p1 ID=MSTRG.11122.1.p1|Name=MSTRG.11122.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4381bp|location=Sequence derived from alignment at sc0000079_pilon:1233126..1237506+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACGGCATTCTAGTTTCCAGGTCTCTAGAGAGCTAGGTGAGATATAGCG
AGCGTGGGCGGCACAGTGAATCATTCCATAGCAAGCTGTCGTGGTAAGCG
CACACGTGTACAACAAACCTTCTTGAACAGAAGgatttcattttaaaaga
gtatattttacaatttctgataaaaagtacaatttctttcctttttcttt
tagaaGTGAATCTAAATCTAGGAATTCTCCTCTCTGAGAAAAATGGCTGA
TATACAAGATATTTTAAAAGGACTTGAGACATCATCTCCAAGAAGAAAAC
GAAGTTATACTAGTTCTgactcatcatcatcatctgacTCCGACAACAGC
AGCAGTGGTTCATCGATTTCATCTTCATCTGATAGTTCCTCAAGCGatca
ttcaaaacaaagaaaaaagaggaggAGAAGAGAAGAACATTTGAGTGACA
GTGATGCTTTATCTATTCATGCAGGGGAAACCCCTGATAAAAATGGTAGC
CAAAGTAGCTACAAAAATGACAGCCAAAGTGCtgctgaaaagaaaaacaa
cgaaAGTGTTGGTAAAGAAGAAACTTCTCTTGACTTATACTCTAATCTCA
ACCTTGTGAGCACAGAAGAGAAAAAGGGCGAAAAAATCGATGATGGTTGG
GCTAAAATAATAGATAAACAATGGAGTAACTCCAAAACTGTTGACAAACT
TAAACCACTCATGGAGAAATATGTAGTCCCAAAAAATTGTCAGAAACTAA
CCATTTTGGATATGAATGAGGAGATTAACAAACTGCTTTCGTCTTTCCAA
AAGAAGAATGACAGGAGATATAAAGGCATACAAAAAGCACTCAGGACTGC
AGTTTGTGGAGCATTAACTTTAGTAGATGCTGCTGTGTCAACGACAACCT
CACCTGAAAAATTGACCCAACAACAGATTTACCAAGTGGGGATTGACATC
GTGGCCTTACTTGGCCGTGTAAACACTGACATTTCTGACATCAGGAAAAA
ACATGCCGTTTCTGTGTTGAAACCAGAATTCAAATGCTTGACGACACAAA
CTAAATCCTCAAATTCAAAACTATTCGGTGAAAATGTATCGAAAGTCttg
aaaagtattgatattACCAACAAAGTTGGtggaaaaataaagaagtaCAA
CAACCGATCGTCGTACCAAAAGAAAGAATCCTATGACAGACAAGACAGAT
CTTACAACAAATCGCAGTCTTTTTTAGGACACGGCCGAAATTCCTGGCAA
CAAGGTCGGAAGAATTATCACAATCATCGTCAttcaagcaacaacaacaa
caacagaaatcaaaagagaaaaaactaaaagtgagttctttgaaaaacat
caaagaacaaaTTGAAGCATTGAATGATTACTTAACAGCGAAAGTTGAAA
ACTTTAGTGCTGGACAACTCTCCAATCATTTAGAAGAATGGGAGAATTAT
ACAAGTGATCCAGAAATTCTTCAAATTGTTCTTGGTGACACTATTAAATT
TAACCATGATTTCTATTATcagcatttttgtaaaaatgctAATTTCACTC
TTGTGGAAGAAGCCTTTGTGTCAACAGAAATTCGAAAACTTATTTCAAAA
GGAGTAATAGTTCAATGTGAAccagaagaaaaagaatttgtCTCCCCAAT
TTTCACAGTACCAAAAACTGATGGTGGaagaagatttattttgaaTCTAA
AAAATCTTAATAAAATGTTGAGTTTAAACACTTTAAAATGGATACTATTA
AAACTGTTTTAGAAAATATCACTCCTAAATGTTACATGGCATCCATGGAT
CTCAAAGATGCATATTACAGTGTtagaattgatgaaaaatatcaaagatt
tttaaaaaattttcttttgatggaAGACTCTATAAATTTACCTGTTACCC
GAATGGCCTCGGACCATGTCCAAGGAAGTTTACAAAACTGAACAAACCTT
TGCTGTGCTATTTACGACaaaaaaaGGCCATTTTGTTGTTGAATTTATTG
ACGATTTCTTCCTTCAAGGTCAAACATACAATGAATGTGAAAAAGGAGtc
ataaaatcaataaaactcTTCGATGGAGTAGGTTATGTTATCCATCCAAT
AAAATCCCATTTAATACCATCAAATGAGATTACATATCTAGGTTTTGTGA
TTAATTCCATTGACATGACTGTTGAAATAACACAGGAGAAAAAAGATGAC
ATTTTGAGTTTTGCAGTTACCTTAATAGAATCCTTTCAAATATCTATCAG
ACAATTAGCTGGATTTATTGGTAAAATCGTTGCAACCTTTCCTGGCTCAA
CATATGGGCCATTACACTATAGATGTCTTGAAAGCTATAAAACTGTTTGT
CTTCGAGAAAACAAAGGCAATTTTGATGCTAAAATTAGGCTCACTCCTGA
ATGTAAAATAGAATGCTCCTGGTGGAGAGATAAGGTCATGGACATGAAGA
AATCTATTGATCTACCCCCTTTTGATCATGAAATATATACTGATGCTTCA
AAAACAGGGTGGGGTGCTGTattttccaataaaaagttATCTGGTCATTG
GGATTTTGTTGAAGATGTACACATTAATGTGTTAGAAATGCAGGCAATAC
TCAATACAATCACTAAGTTtacaaaatacataaaaaattcaCACATTAAA
GTGTACTGTGATAATGTTACTGCTGTTTCAACTATCAATAAAATGGGAAC
CAGTCACAGCACTAATTGTAATAAATTAGGACAACTTATTTGGGAATACT
GTATTGAAAATTGTATATGGATTACCTGTACATTCATTCCTGGAAAGGAG
AATATTGAAGCTGATGCCCTGTCTAGAAAGTTGTATAAAAATGCTGAAGC
AATGCTTAATAGGGAGCTTTTCAATGAAGGCATTAAACAGTTAAATTTCA
TGCCTGACTTGGACTGTTTTGCAAGCCCCTCAAATGCCCAAATTGATAGA
TTTGTATGTAGATTCCCAAAGAAGAACTCCTTTGCCACCGATGCTTTTAC
TGTCGACTGGTCAAAGTATAAGTGTTATTTATTTCCACCTTTTAGCCTAA
TCGGAAGAGTGCTACAAAAGATCAGAAGGGACAAGCCAAGAAGAGTCTTA
ATGGTTGTTCCTCGTTGGCCAACTCAAGCTTGGTATCCTATGCTAGAACG
TCTTATGATTCAACCGCCGTTCAACATAAAGCCCCAAAAAGCCAATATGT
TTGTGGGAAAAGGTGTTCATCCGATGGCTCACAAAATTCCTTTGATGATG
TGTCTATTGTCAGGGCTGCATACATAGGTATGAAGATTTCACCCGAAGTG
GTGGATGTAATCATGACAAGTTGGAGGAAAAACACATTGGCCAAATATAA
ACCCATTCTTAGAAAGTGGTATACGTTTTGCTTAGAAAATAAAGTAAACA
TTGTCCATCCAAACTTAGATGATGCAATGTCGTTTTTAGTCCAACTGTCA
CGATCAGGTTATTCTTACTCTCAGCTCTGTACAGCTAGATCAGCCCTCTC
TTCTATTCTCTGGGTTGATAAAGGCATTCCATTTGGAGAATACCCTGTTa
ttaaaagactttgaaaattaaaagattttttgaatgtAAACCAACATTTC
CTCGTTTCTATTCAACATGGGATGTTAAAATAGTATTTGACTACATCAGA
AAATTACCTCATCAAGACGATCTTCCCTTGAAGATATTATGTAAAAAGCT
TGTGGTTCTAATGGCCCTACTCGCAGGTGGTCAAAGAATGCAGACTATTC
ATAAAATCGACTTAAGAGACATAACAGTTGAACCAAATAAAATTATTATC
CCCATTATGGATAAAATCAAGCAAACTAAACCTGGAAAACACCTTAAACC
ACTTGAGTTTTTGCAGTATCCTAATGAACCAAAGCTTTGCGTGCCATCAA
ATCTGAAAGCCTACCTATCTAAAACTATAAATAATAGAACCTCTTACCCT
TTGTTTATCAGTTACATAAAACCATTCAAGCCTGTTTCAAAAGATACAGT
TGCAAGATGGTGCAAGGATTTTTTACAGTTATCGGGTGTTGATATCAAGA
GATATACTTCTCATTCTTGCAGGTCTGCTGCGTCGtcgaatttgaaaaca
aaaattgatgtaAAGAAGATACTAGACTCAGCAGGTTGGTCATGTGAATC
GACCTTTGCAAGGTTTTACGAAAAACAAATCGAAACATCCATTGGTACTG
CTATGATTGATACATGAACATTATTAAATGGATATGTTGATAAATGAACA
TTTTGAATGACTTTAAACATTTGCGTTAtgaattatattatattttccaG
TCACTTTGTGGAATAGTAACCTTACATACCATAATAAGCGATTACATTTG
AGTTAAAAACCAAATATTAGTTTatgaaaaa Coding sequence (CDS) from alignment at sc0000079_pilon:1233126..1237506+ >MSTRG.11122.1.p1 ID=MSTRG.11122.1.p1|Name=MSTRG.11122.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1086bp|location=Sequence derived from alignment at sc0000079_pilon:1233126..1237506+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATATACAAGATATTTTAAAAGGACTTGAGACATCATCTCCAAG
AAGAAAACGAAGTTATACTAGTTCTgactcatcatcatcatctgacTCCG
ACAACAGCAGCAGTGGTTCATCGATTTCATCTTCATCTGATAGTTCCTCA
AGCGatcattcaaaacaaagaaaaaagaggaggAGAAGAGAAGAACATTT
GAGTGACAGTGATGCTTTATCTATTCATGCAGGGGAAACCCCTGATAAAA
ATGGTAGCCAAAGTAGCTACAAAAATGACAGCCAAAGTGCtgctgaaaag
aaaaacaacgaaAGTGTTGGTAAAGAAGAAACTTCTCTTGACTTATACTC
TAATCTCAACCTTGTGAGCACAGAAGAGAAAAAGGGCGAAAAAATCGATG
ATGGTTGGGCTAAAATAATAGATAAACAATGGAGTAACTCCAAAACTGTT
GACAAACTTAAACCACTCATGGAGAAATATGTAGTCCCAAAAAATTGTCA
GAAACTAACCATTTTGGATATGAATGAGGAGATTAACAAACTGCTTTCGT
CTTTCCAAAAGAAGAATGACAGGAGATATAAAGGCATACAAAAAGCACTC
AGGACTGCAGTTTGTGGAGCATTAACTTTAGTAGATGCTGCTGTGTCAAC
GACAACCTCACCTGAAAAATTGACCCAACAACAGATTTACCAAGTGGGGA
TTGACATCGTGGCCTTACTTGGCCGTGTAAACACTGACATTTCTGACATC
AGGAAAAAACATGCCGTTTCTGTGTTGAAACCAGAATTCAAATGCTTGAC
GACACAAACTAAATCCTCAAATTCAAAACTATTCGGTGAAAATGTATCGA
AAGTCttgaaaagtattgatattACCAACAAAGTTGGtggaaaaataaag
aagtaCAACAACCGATCGTCGTACCAAAAGAAAGAATCCTATGACAGACA
AGACAGATCTTACAACAAATCGCAGTCTTTTTTAGGACACGGCCGAAATT
CCTGGCAACAAGGTCGGAAGAATTATCACAATCATCGTCAttcaagcaac
aacaacaacaacagaaatcaaaagagaaaaaactaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:1233126..1237506 + |
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