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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:1199299..1204429- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11119.6.p1 ID=MSTRG.11119.6.p1|Name=MSTRG.11119.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5131bp|location=Sequence derived from alignment at sc0000079_pilon:1199299..1204429- (Clytia hemisphaerica_ch_hm2_pilon)
TGTCATCAATGAAGTCAAATCTTACGTAGATCTTATTTTAGTATGAATAA
TTCCAATAATAAAACAAAAGGGAAGAAGAACAAGACAAAGGACAAGAAAG
GAAACTTTCCCAAAAGAGATGCATATGAACGAGTTGAGTTTCTCAAACAG
GTATCATTTTGAATTGTTTCCTTATAATCTGCTTTAATGCATATTTTCAG
CCTGTTACTCTTAAAAGTAATAAATGTGGCCCCAGCGGTTTGCGTCAGTG
GCCGTGAAAATTGAAAAAATGCATGAATGCATGATTGAAAAAGCTTCAGC
ATGAACGTGAAAATCTCATTTTTAAATTTTTGAATTTGTTCTCTTTTTTT
GTGAATACGTGAATTTTACCTTTTTCCTTTGATTACGTTTAAATTTCTCT
GACTGTCAAATGTTTCCCTGATTTTTACAGTACCTAAAATTTTCTGAAAA
ATTTGGTTTGCCTGAATCTCAAGAAAAATTTATGTAAATGTGTGAATTTA
AAGAGAAACGCATGAATCCGTGAATCGAGTACTAATAAACGTTTCCCCAG
CCTTGGATGACACTCTTTTTTCCACCTACCTCAACTCCTTAAATTTTAGG
TAAAATCTTTATGAAAGTCTCCTGCGAAGAATCCTGCATTACAACACACA
TGTCTAATTTGTCGTTTTTCTAACCATATGTAGTTGATCTTTGATAAAGA
ATTTAAAAGATTGGAGTGGGCAAACTTGCTGGGTCCAAGCTGTGAATGAC
TAGATTTGTCGTTGTTTTCAATTAGTTGTTCTTTTTGCTTATTTTTTTTG
TAAATGTAGGATCCTTTAGATTAAGAGCAGATGCGGCTAAGGATCAGAAA
TATGGAATTAGGGGGGTCCTCAGATTTTGATGAAATTTGGCACATATGTG
AGGAACCTTGAGCTGATCACATCCAGAAAATTTCAGCGCTCTAGCACCAG
CGGTTCGAAAGTTATGCCCAATTTTGTAAAAGTCTATTTTACTGACCGGT
AATTTACAGACCAGAATTAAAACTGCTATAACTCCTTCAATATTTATCCA
ATTGAGCTGAAATTTTGCACACATGAAGAACTTATGGATTACTTTGAGGC
AAAGTCAAAAAAAAATTTTTCGAGACCACTGATGTTCCGCCATTATGGAT
TTTCGTTTTGAAAATTCTAAAATCTTTGCGCAACTCGTGCCCAATTTCCC
AAAAAAGGGGTTGTCAGAATTTTGAGTGTCATATATCATTTGAAAGCTCA
GACTGTCTTCTTTCAAGACAAAAAAGAATTAGGATGGAACTCTAATCCTA
ACTAAAGAAAATTTGATTTGAAGTGGGGTCATTTTTTACCGAAAAATTCA
AAATTTCCCTAGCAACCATGTATGAATTCCTTAGTAACCAAGGTAAATAT
TAATTTCAAATGATCTGATTCATTCATAGGAACATTTTCTTATGTGTCTT
TGAGCATCAACAGATGTAAACACCCCTCAATTAATCATCAAGGTCATTTT
TTTTCTATTTTCCACCTGAATTAGCAAATTTTCCTTAGCAACAAATGACA
GTCCTAGGCAACCAAAGCGGTAATTTATTGTTTTATTATTTTATTTACCT
ATTTCATCTTTTTCCTTGGTAAAAAAGTGAAAAAAGGAGGAAAAGTATAC
TGAAGTATCAAGGATAGAAAATTAGAGAGAAAGGTATCCCAAAATCTTGT
CCTCACTTTGGGAATGCTTAACTATTTATTTTACTTACAATTCAACATGA
TTCCTTTACTAATCCCACTCCAAAGCCTGTCCATTATGTAAATATAAGTG
TTTTTATTTATTTTTCTCATTTTTTAAATATATAAATGTTATTTCTATGA
AGGCTCATTTGAAGAAAAAGTTTGAAGAAGCACTATCAAAATTTTTTTGA
TCATTTGAAATATAAAAGTGGCTGTAATGGTTTTAGATCAATTTTGATAA
AATATGTTTTAAACTATTCTAAAAATAATATAAAATTCTACTGGGTGACC
CCAAAAAAGTGTAAATAGGAAAGGTAAAATTAATTTCAGCATATATTATT
TTAAAATTTGGTTCAGTACTTCTCTAGGTTTTTCTTGAAGTCAAAATTCA
CTTTTTTTGGGTCACCCTGTAGATGGCACAATCTAAGAAAAAAAAGTTGA
GTTGCTTTGTTGGTGAGAGATTAAATGAAGAATGTGGTTTGACTTGGTTT
GGATCTAATGATAGTAATTCTCTTCCTGTAAACTTTGGTGAGTGTCGTCA
GGATCCTACCACCCATCTTTCATCATTGGGATTCTCAGATGAAACAATCT
TTCACTGCCCAAACACCAATGAACAATGGCTTATCATGCATCGTCTTCAA
TTTACAATCCCAGATGAGGCGCTAATATGCCCAAAGCACCGATTAAAATT
TGGATTAGGATGGAAACCTGAAGTGTCATGCCAATATCCCAGCCACAAGA
AATCAAAATTGAAAGCAAAGAATATGCGCAAAATACCAATTTCAGCAGCA
GCACAGTGCCACCTCCTCTTTTCTAGTGCTGGAGAGAAAACAGTCATTCA
AGTTGGTTCCAAATGGTGCAGTAGTTGTCGAGTCAAATACCATCCCTCTT
TAATGGAACAAAACAAAATAGACCTAGGTCATAGGTGTTGTCTATGTCTT
GAAATGCATGACACAAATGAGATGGATGTTTCCTTAATCTCAATGGATGA
CAATCAGCCTGACCACCTAAATGCATCTATTGTTTCAACAGAACCAGAAC
CTGCTGACAGTGATTATGAACCTGAGACTCAATATTCCGAAAAAGAAATC
TTCAATCGATCCATGAGTAGCATGTCAAAAGAATGGGAGCCATTGACATT
TCAACTACATAGAGACTTTGATGACTTGGATGAAAAGAACCAGAAAATGC
TTGTCAGAAAAAGTTTATCAGCCATTGACACCGTGTTTGAATCAATTGCA
CCAGGCCAAGCAGAAAAATTGAAAAAAGCATGTGCCAATCCAACACCCGA
CACCTATCTTACCGAAGCACTTCAGCACTTTATATTTTCAGGTTTGAGCC
AAACGCAATGATTGAAGAGAACACACAACTGACCAAAGTCAACAATCGAT
GAAAAACGAAAACAATCACATAGATATTATTTCATTAGCCATTCTTCTTT
AATTTTGACAAGAACTATAGTATCCAAAAACCATTATTTCTATACATTCA
CTCCTTCATTCCACTTTTTTCATACTTTTTTTCTCCATCTCTTTGCCTCA
GGATTGAGAGAATTTGCATATTTTGAAGGAAATTTTGAAATAAAACTTTG
ATATTGGTTAAAAAATGTTTGGATCCATCATGTACACTCTCAAAAAAGAT
TTATCAAAGGACCTACAGGCAAAAATTAAAACATTAAAAGGGGGATTTTT
AGCGGTTTCTAAGGAATTTTTGCTTGTTGCAAGGGAAAATTTGCTAGTTC
TGGTTGAAAATAGAAAAAAAATTGACCTTGATGATTACTTGTAGGGTGTT
TACATCTGTTTATGCTCAAAGACACATAAGAAAATGTTACTATGAATGAA
TCAGATCATTTGAATTAATATTTACTTTGGTTACTAAGGAATTCATACAC
GGTTGCTAGGGAAATTTTGAATTTTTCGGTAAAAAAATGACCCCACTTCA
AATCAAATTTTCTTTAGTTAGGATTAGAGTTCCATCCTAATTCTTTTTTG
TCTTGAAAGAAGACAGTCTGAGCTTTCAAATGATATATGACACTCAAAAT
TCTGACAACCCCTTTTTTGGGAAATTGGGCACGAGTTGCGCAAAGATTTT
AGAATTTTCAAAACGAAAATCCATAATGGCGGAAGATCGGTGGTCTCAAA
AAAATTTTTTTTGACTTTACCTGAAAGTAATCCATAAGTTCTTCATGTAT
GCAAAATTTCAGCACAATTGGATAAATATTGAAGGAGTTATAGCATATTT
AATTCTGGTCTGTAAATTACCGGTCAGTAAAATAGACTTTTACAAAATTG
GGCATAACTTTCGAACCGCTGGTGCTAGAACGCTGAAATTTTCTGGATGT
GATCAGCTCAAGGTTCCTCACATATGTGCCAAATTTCATCAAAATCTGAG
GACCCCCCTAATTCCACTTTATATGGAGGCCTTCTGAATCTTAGGTGCAT
CTGCTCTTAAATCCCTCGTTCATCTGTAGCCTCTGATTCAGCCTCTTGTA
TTATGATTTTTTGAAACCCTTTTCACTCATTTAGGCTGCACAATTGAATC
TGAGAATCAACCCACACAATGAGGAGCTATCCAGGCACTATGTCAAATGT
TTGAGATCTGTCAAAGAGAAAAAATGCTTATCACTGTATGTTTTACTATA
TTTAATAATGGCTCGTCTCAGGTCCCAGGCCTTTGTTGGATCTGTGAAAT
AATTTTTGAAACTTTATGAAACTCTCCAAACCACATTGATGATTGAAACT
ACTACACAAGAGCCACTAAATTAATTCTACTTCTTAACAAACTTATTTTT
CAAGCCAAATAGAATTCCATCTCAAGAAAGAAAAACTTTCAGTAATTGTT
TCTTCTTTAAGGACAAACGAAATGAAGCGCAGTATTTGTAAAGGCTGTAA
CATGATACTGGTGCCTGGAGTGACAACCAGAGTTAGAGTTGGAGGTTTGT
TATTATTTATTTCAAAAAATTGAAGTTTTGGTCTTTTAGTTAGGGACTAT
TTTCTTTACCTCGCAACTTCTTTTGAAAGGTATATAATAAAAGAAGTAAC
ACAAAAAAGAAATCTTGGCTTAGAGTTGCATTTCTTGTAAATTTTCCGCA
ACATAAAAAGAATCTTTCTGTCAATTAAAGAAAAGTTACTTCAAATTTAC
CTATTTTTAATTCAGCCAGAGACTCTTTTTACAATTGAAGGTTATTTTTA
AGGGTAGATTCTAGTTGGCCCTAGATTTATAGAATTTAGAAATAAAGTAA
AATGATTTGTCCCACTTAGACCATAAACGGATCAACATCACATGTTTGAC
TTGCAATAACAAAAAGAGAGTACATATTAGAAATAAGAAGAGACAAAAAG
GTGCAAAGAAGACCAACAAACCAACTGAAGAAACCGATGAAACAGCAAAG
GGAAAAAGCTGAGAAGGTATGGAAAAATTAT Coding sequence (CDS) from alignment at sc0000079_pilon:1199299..1204429- >MSTRG.11119.6.p1 ID=MSTRG.11119.6.p1|Name=MSTRG.11119.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000079_pilon:1199299..1204429- (Clytia hemisphaerica_ch_hm2_pilon)
ACCATAAACGGATCAACATCACATGTTTGACTTGCAATAACAAAAAGAGA
GTACATATTAGAAATAAGAAGAGACAAAAAGGTGCAAAGAAGACCAACAA
ACCAACTGAAGAAACCGATGAAACAGCAAAGGGAAAAAGCTGAGACAAAC
GAAATGAAGCGCAGTATTTGTAAAGGCTGTAACATGATACTGGTGCCTGG
AGTGACAACCAGAGTTAGAGTTGGAGGCTGCACAATTGAATCTGAGAATC
AACCCACACAATGAGGAGCTATCCAGGCACTATGTCAAATGTTTGAGATC
TGTCAAAGAGAAAAAATGCTTATCACTATGAATAATTCCAATAATAAAAC
AAAAGGGAAGAAGAACAAGACAAAGGACAAGAAAGGAAACTTTCCCAAAA
GAGATGCATATGAACGAACCATAAACGGATCAACATCACATGTTTGACTT
GCAATAACAAAAAGAGAGTACATATTAGAAATAAGAAGAGACAAAAAGGT
GCAAAGAAGACCAACAAACCAACTGAAGAAACCGATGAAACAGCAAAGGG
AAAAAGCTGAGACAAACGAAATGAAGCGCAGTATTTGTAAAGGCTGTAAC
ATGATACTGGTGCCTGGAGTGACAACCAGAGTTAGAGTTGGAGGCTGCAC
AATTGAATCTGAGAATCAACCCACACAATGAGGAGCTATCCAGGCACTAT
GTCAAATGTTTGAGATCTGTCAAAGAGAAAAAATGCTTATCACTATGAAT
AATTCCAATAATAAAACAAAAGGGAAGAAGAACAAGACAAAGGACAAGAA
AGGAAACTTTCCCAAAAGAGATGCATATGAACGAACCATAAACGGATCAA
CATCACATGTTTGACTTGCAATAACAAAAAGAGAGTACATATTAGAAATA
AGAAGAGACAAAAAGGTGCAAAGAAGACCAACAAACCAACTGAAGAAACC
GATGAAACAGCAAAGGGAAAAAGCTGAGACAAACGAAATGAAGCGCAGTA
TTTGTAAAGGCTGTAACATGATACTGGTGCCTGGAGTGACAACCAGAGTT
AGAGTTGGAGGCTGCACAATTGAATCTGAGAATCAACCCACACAATGAGG
AGCTATCCAGGCACTATGTCAAATGTTTGAGATCTGTCAAAGAGAAAAAA
TGCTTATCACTATGAATAATTCCAATAATAAAACAAAAGGGAAGAAGAAC
AAGACAAAGGACAAGAAAGGAAACTTTCCCAAAAGAGATGCATATGAACG
AACCATAAACGGATCAACATCACATGTTTGACTTGCAATAACAAAAAGAG
AGTACATATTAGAAATAAGAAGAGACAAAAAGGTGCAAAGAAGACCAACA
AACCAACTGAAGAAACCGATGAAACAGCAAAGGGAAAAAGCTGAGACAAA
CGAAATGAAGCGCAGTATTTGTAAAGGCTGTAACATGATACTGGTGCCTG
GAGTGACAACCAGAGTTAGAGTTGGAGGCTGCACAATTGAATCTGAGAAT
CAACCCACACAATGAGGAGCTATCCAGGCACTATGTCAAATGTTTGAGAT
CTGTCAAAGAGAAAAAATGCTTATCACTATGAATAATTCCAATAATAAAA
CAAAAGGGAAGAAGAACAAGACAAAGGACAAGAAAGGAAACTTTCCCAAA
AGAGATGCATATGAACGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000079_pilon | genome | sc0000079_pilon:1199299..1204429 - |
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