MSTRG.11112.1.p1 (mRNA) -

Overview
NameMSTRG.11112.1.p1
Unique NameMSTRG.11112.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:1118405..1119493-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11112.1.p1 ID=MSTRG.11112.1.p1|Name=MSTRG.11112.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1089bp|location=Sequence derived from alignment at sc0000079_pilon:1118405..1119493- (Clytia hemisphaerica_ch_hm2_pilon)
TTGTACAGAGGTGCTTAAGGAGACGCCACTATTCGAGAGCTGCGATGACG
CTTACGTATTTTCTACTAAAGATGACAAAGTTGGAAGCATATACAATGAT
TATGACGGCGATTCCGACAAGCTAATTATGGAGTCAGACTTTCAGGAGGA
CGAACTATCATGTTCCCAGTCTGCCCATGAACTAATACAACAGGAAATCG
TCAGAGACCCGATTGTGGATGACGAGGATATGGATTTCTATTTTCTTGAG
TCCGACGAGGCAACTCCAGCTAGGTGGACTAAAACGCACAAACTTTTCTA
CACGGAGAAAGGAACTACTCATTACCAGTTGTGTATCAATATTTTGAACT
ATATGTCTAACGAGGAATGGAGGAAGGTGCCTATCAACCAGGAGGACATT
AAGAGGTATTTGTTATTATTTCTCTCAAAGTGTGATACTGAACCTGGAAA
TCGTTTTGAAAAGGTTAATTTGCCAAGTTTTACCATTGAATGTATTATGG
ACTTGAAATTCTTATGCTCCATGCTCTGATTGAAACATAAGGAAACTTCC
AGCACCACGAAACTGTGATGTTATATTGACGGCTTATTTCATTATCTTTT
TAGGTACGAGATAAGAAGAAAACGCAAATGGCGTGGCGGAGACACCTTTT
ACGAGGCTTGAATGGCACGGCAGGACACGGTGCCTGAAACTCCGTTAAAG
GATATGCCCGCCCCAAGTGTTTCAACCTCCACCCCTACTAATGTAGCTGG
GCAAAACTCTAACTCTTCTAGTCCAAAAAAACGACAGTTCCCAACCGAGT
GTTAAACTTCAGTCCTATCAAAAGGAAAAAGTGTTCCCAGAAAAGTTCTT
CCACCCCATCAAGCTCGAGTAAAACCTTTGCATGCTCACCGCCGAATTCT
TCAAAAGCTCTCCTCTGAATCTATTGAAGATTCTTTACAGCGACAATACA
AGTGATGACGACGATGAAGTTCTTCCATCCCTGAAGCGGACGAAGAAATC
ACAAAAATCGGAAACGTCTAATGCAATCGATAGTGGCACGTCAACGGAAA
GCGCTTCGGACGAAGATAAAAAACCGCCACGAATTAAAG

Coding sequence (CDS) from alignment at sc0000079_pilon:1118405..1119493-

>MSTRG.11112.1.p1 ID=MSTRG.11112.1.p1|Name=MSTRG.11112.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000079_pilon:1118405..1119493- (Clytia hemisphaerica_ch_hm2_pilon)
GTACGAGATAAGAAGAAAACGCAAATGGCGTGGCGGAGACACCTTTTACG
AGGCTTGATGTACAGAGGTGCTTAAGGAGACGCCACTATTCGAGAGCTGC
GATGACGCTTACGTATTTTCTACTAAAGATGACAAAGTTGGAAGCATATA
CAATGATTATGACGGCGATTCCGACAAGCTAATTATGGAGTCAGACTTTC
AGGAGGACGAACTATCATGTTCCCAGTCTGCCCATGAACTAATACAACAG
GAAATCGTCAGAGACCCGATTGTGGATGACGAGGATATGGATTTCTATTT
TCTTGAGTCCGACGAGGCAACTCCAGCTAGGTGGACTAAAACGCACAAAC
TTTTCTACACGGAGAAAGGAACTACTCATTACCAGTTGTGTATCAATATT
TTGAACTATATGTCTAACGAGGAATGGAGGAAGGTGCCTATCAACCAGGA
GGACATTAAGAGGTACGAGATAAGAAGAAAACGCAAATGGCGTGGCGGAG
ACACCTTTTACGAGGCTTGATGTACAGAGGTGCTTAAGGAGACGCCACTA
TTCGAGAGCTGCGATGACGCTTACGTATTTTCTACTAAAGATGACAAAGT
TGGAAGCATATACAATGATTATGACGGCGATTCCGACAAGCTAATTATGG
AGTCAGACTTTCAGGAGGACGAACTATCATGTTCCCAGTCTGCCCATGAA
CTAATACAACAGGAAATCGTCAGAGACCCGATTGTGGATGACGAGGATAT
GGATTTCTATTTTCTTGAGTCCGACGAGGCAACTCCAGCTAGGTGGACTA
AAACGCACAAACTTTTCTACACGGAGAAAGGAACTACTCATTACCAGTTG
TGTATCAATATTTTGAACTATATGTCTAACGAGGAATGGAGGAAGGTGCC
TATCAACCAGGAGGACATTAAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11112MSTRG.11112Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11112.1.p1.exon2MSTRG.11112.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11112.1.p1.exon1MSTRG.11112.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11112.1.p1MSTRG.11112.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:1118405..1119493 -