MSTRG.11111.1.p1 (mRNA) -

Overview
NameMSTRG.11111.1.p1
Unique NameMSTRG.11111.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:1043090..1044730-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11111.1.p1 ID=MSTRG.11111.1.p1|Name=MSTRG.11111.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1641bp|location=Sequence derived from alignment at sc0000079_pilon:1043090..1044730- (Clytia hemisphaerica_ch_hm2_pilon)
AAACAACACCGAAAAAATGGGTAGAAAATGCATTGTGCGTGGCTGCAAAT CTAATTATAACAAAAGTAAAGCGTCGCAAAATGATAATATACGAATCAGG AATGAAGAAAAATTAGCCGATTTTCGTAAAATTCCAATGTATGGTTTCCC AAGCAAGAAGAAAAGACTCTATGAAAGGCAGCGCTGGATCAAATCCATTC CGTACCTTACCGAAGAGATCGTCAATAATAACAATACACCAGCGGTTTGC CGTAAACATTGGCCAGAAAACACTACTTTTGAAACAGGTGTGTAACCTTA TTGCTTTCGTGGAATATTTGAACAAGCTAAATAAAGTCTTCGGATAAGTT TTTCTCTGTTCATAGGTTATCTATTAACATATTTTCGATATTATAAAAAA TCCAAATCTGATGCTTGTTTTTGTTGAAAATGTTTATTTATAATTCACTC ATAGGCCCATAAGATACAAATCTACAACACAAAGTTCAATTAACTCTTAA ACGCTATGTTTATTTCTTTCTTTAGGTCAGAACGGCCTTCCTCGACCAAT CGAACCACCATCAATCTTTGATAATATACCGTCCAGTTCCATTCCAACAC CTCTTCCACCTCCAAGACCAACAAAACGCACGTCTTTCGAAACTCGCAGC CAGCAGGAGGATGAGATGGAAGAGTTTAGAAATCGCGACAAACTAAAATT TGAGGACATCGCCAACTCCGATCGATTGACATTACTCGGTTTGCCTATTG TCGCATTTCAAGTCAATGGTGAACAGTGAATAGTGATCCATTGGAAAAAG AATTTGGAAAGCTGAGACAAGGTTCCGGAGGTGAGAACACTTTTTAATTT CTTCTAATTGAAATGAGGTCTTCATTTTAAACATTGTTAATCATTTTACG GCTTGAATTGTTTACGCACGTAATTATTAGTTTGCGATGCGTTTTTCGAT TACTTACAAGTTTACACCGAAAATTCAAAATTTTCCTTTTATCTTCATCT ACAGGAACGTATTTTATCACTGCTCAACAAGTACTCGAAAAACTCGATAT CAAGAAAACCAAACTTTTGCTAAAGTTGAATGTCGACCTGTCCGTTTTAC GAGCTGAACCGGGTCATTGTTGTGACAAGTGTTTTTTTGCTCTTGATCGT GATGGAATAAGTTTGCTCAACCAGTTAGAAGAGGAAGAGATGTCCATCCC GGTCGAAACGAAAATGTCTCTTATATATATGGCCGGTTATGTAGCTCGTA AAGATGAGATGAGTGAGCAGGAGTTATTCGATGCTACGATGTTTTACGCT CAAAAGTACGGGAAATATCTTCACGAGCTTGACCGTGGTGGTTTGAAAAT TCCGACTGATACGATTTGTCAATGGACGATGTTTTCATACATAATGTTCA ATCATATCCGACATCTCGTCTGCCGAACATCACTGTCTGATGTCTTGATG TCTATCGCTCACACATACGCTTTTGACTCTATCACTAAAAATAATGCTAT GATATTATCGAACATCTTTCTGAACAATTTCTGCAAATCGCAGACGCCTC GCTCCTCGAAGGAGGCGAGCCAGAAAGTTCTAAAGCTAAAAGAAAAATGA AACATCTTTTTCTATCATCACACTCTGAGTGCATCCAGTTC

Coding sequence (CDS) from alignment at sc0000079_pilon:1043090..1044730-

>MSTRG.11111.1.p1 ID=MSTRG.11111.1.p1|Name=MSTRG.11111.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000079_pilon:1043090..1044730- (Clytia hemisphaerica_ch_hm2_pilon)
GTCAGAACGGCCTTCCTCGACCAATCGAACCACCATCAATCTTTGATAAT
ATACCGTCCAGTTCCATTCCAACACCTCTTCCACCTCCAAGACCAACAAA
ACGCACGTCTTTCGAAACTCGCAGCCAGCAGGAGGATGAGATGGAAGAGT
TTAGAAATCGCGACAAACTAAAATTTGAGGACATCGCCAACTCCGATCGA
TTGACATTACTCGGTTTGCCTATTGTCGCATTTCAAGTCAATGGTGAACA
GTGAAACAACACCGAAAAAATGGGTAGAAAATGCATTGTGCGTGGCTGCA
AATCTAATTATAACAAAAGTAAAGCGTCGCAAAATGATAATATACGAATC
AGGAATGAAGAAAAATTAGCCGATTTTCGTAAAATTCCAATGTATGGTTT
CCCAAGCAAGAAGAAAAGACTCTATGAAAGGCAGCGCTGGATCAAATCCA
TTCCGTACCTTACCGAAGAGATCGTCAATAATAACAATACACCAGCGGTT
TGCCGTAAACATTGGCCAGAAAACACTACTTTTGAAACAGGTCAGAACGG
CCTTCCTCGACCAATCGAACCACCATCAATCTTTGATAATATACCGTCCA
GTTCCATTCCAACACCTCTTCCACCTCCAAGACCAACAAAACGCACGTCT
TTCGAAACTCGCAGCCAGCAGGAGGATGAGATGGAAGAGTTTAGAAATCG
CGACAAACTAAAATTTGAGGACATCGCCAACTCCGATCGATTGACATTAC
TCGGTTTGCCTATTGTCGCATTTCAAGTCAATGGTGAACAGTGAAACAAC
ACCGAAAAAATGGGTAGAAAATGCATTGTGCGTGGCTGCAAATCTAATTA
TAACAAAAGTAAAGCGTCGCAAAATGATAATATACGAATCAGGAATGAAG
AAAAATTAGCCGATTTTCGTAAAATTCCAATGTATGGTTTCCCAAGCAAG
AAGAAAAGACTCTATGAAAGGCAGCGCTGGATCAAATCCATTCCGTACCT
TACCGAAGAGATCGTCAATAATAACAATACACCAGCGGTTTGCCGTAAAC
ATTGGCCAGAAAACACTACTTTTGAAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11111MSTRG.11111Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11111.1.p1MSTRG.11111.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11111.1.p1.exon3MSTRG.11111.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11111.1.p1.exon2MSTRG.11111.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11111.1.p1.exon1MSTRG.11111.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:1043090..1044730 -