MSTRG.11099.1.p1 (mRNA) -

Overview
NameMSTRG.11099.1.p1
Unique NameMSTRG.11099.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:817553..818636-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11099.1.p1 ID=MSTRG.11099.1.p1|Name=MSTRG.11099.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1084bp|location=Sequence derived from alignment at sc0000079_pilon:817553..818636- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTCAACTAACATTTTCGGGTGTATATCATCCGGACCGAAGGATTTAA
TCACTTCCAGCAATTTTATCTGTTTTCTCATCAATTTGAAGTTACATTTT
CCTTTGGACGTGAAAATTTCCATAGAAGAAATAATTCATCTAGATTTTGT
ACATCTAATTTCAGGTAGCAATAACAAACAGTACACAAGCATATTATCTA
TAATAAAGACAATGAAACTTATGAACAAATGACATGGATGGGAAACAATT
GCATGGTCTGGTATGGAAGATTACTGCTGAACTACAACCATTGTGTTCAT
TGTTGGTTGAAGCTTTTGCATCATACCACAATAATGACCTTGCTGCAACA
CCTTCACAAGCCTTTGCTAAAAGGATGAAAGACACATACAATGGTCAGAA
AAAGAAAATATATTCATTGGCGACTAACAAGTTTTTTGACAATAACAATC
CTAAGAAAGATAATTTAAGAAAGGATATTGGATTTAATAATCTGGATATC
CAGGTATTGTTAAAGTTATTGATTGAAACTGATTTTCTTTTTGAAAGAGA
CAAAGGGACATGTGGTGTGCACCATAGTGCTAAATGTTGTAACTCTTGTA
AACATAAAATGAAGAGATGCCCATTGTGTAATTGCGACAAGGCAGACTGC
GGTAAATTATGCTGCAAATTATGTGGGAAATGCGTCAAATGCAGCCGTGA
TAAATTTGAAGATTTCAAAGAGTTTTATTTGAGTGGCAAAGATAAGAATT
GTGATATTATTACAATGGAAAATTCGAATCTTTGTTATATGGCTAATCTA
AAAGCAAGCCTTGAGGTTATGTTGAAATGGCGAAATTTATTCCATGTAAC
TCGCGAAGAATGTGAACACTTTGTTTGTAATCGCAGCAAATCTCTTGGTA
ATAATTTTAAAGACATCAATGGTGGACAAGATGAGCTGTTTAAGATTATA
CACATGGCAATCAAAACAGTCATTAAACTTTTATCCGACCCAAATTATTT
TGACGGGAAAGTCGACTTTCGCAAACAGGTGAAAGAAATTGAAAACGATT
TTGATGAAATTATTGATAGTGATTCGAAATTTAT

Coding sequence (CDS) from alignment at sc0000079_pilon:817553..818636-

>MSTRG.11099.1.p1 ID=MSTRG.11099.1.p1|Name=MSTRG.11099.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=849bp|location=Sequence derived from alignment at sc0000079_pilon:817553..818636- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGGGAAACAATTGCATGGTCTGGTATGGAAGATTACTGCTGAACT
ACAACCATTGTGTTCATTGTTGGTTGAAGCTTTTGCATCATACCACAATA
ATGACCTTGCTGCAACACCTTCACAAGCCTTTGCTAAAAGGATGAAAGAC
ACATACAATGGTCAGAAAAAGAAAATATATTCATTGGCGACTAACAAGTT
TTTTGACAATAACAATCCTAAGAAAGATAATTTAAGAAAGGATATTGGAT
TTAATAATCTGGATATCCAGGTATTGTTAAAGTTATTGATTGAAACTGAT
TTTCTTTTTGAAAGAGACAAAGGGACATGTGGTGTGCACCATAGTGCTAA
ATGTTGTAACTCTTGTAAACATAAAATGAAGAGATGCCCATTGTGTAATT
GCGACAAGGCAGACTGCGGTAAATTATGCTGCAAATTATGTGGGAAATGC
GTCAAATGCAGCCGTGATAAATTTGAAGATTTCAAAGAGTTTTATTTGAG
TGGCAAAGATAAGAATTGTGATATTATTACAATGGAAAATTCGAATCTTT
GTTATATGGCTAATCTAAAAGCAAGCCTTGAGGTTATGTTGAAATGGCGA
AATTTATTCCATGTAACTCGCGAAGAATGTGAACACTTTGTTTGTAATCG
CAGCAAATCTCTTGGTAATAATTTTAAAGACATCAATGGTGGACAAGATG
AGCTGTTTAAGATTATACACATGGCAATCAAAACAGTCATTAAACTTTTA
TCCGACCCAAATTATTTTGACGGGAAAGTCGACTTTCGCAAACAGGTGAA
AGAAATTGAAAACGATTTTGATGAAATTATTGATAGTGATTCGAAATTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11099MSTRG.11099Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11099.1.p1.exon1MSTRG.11099.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11099.1.p1MSTRG.11099.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:817553..818636 -