MSTRG.1107.1.p1 (mRNA) -

Overview
NameMSTRG.1107.1.p1
Unique NameMSTRG.1107.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:2302503..2309670-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1107.1.p1 ID=MSTRG.1107.1.p1|Name=MSTRG.1107.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7168bp|location=Sequence derived from alignment at sc0000005_pilon:2302503..2309670- (Clytia hemisphaerica_ch_hm2_pilon)
TCCATTTCAGTGCCAATTCGTCCACATTCCTTCTGCGCATGTGTGCGAGG
GTCTTCGCACTTTCCTCTTTCATTTCACTCACGTTTGTCGTAGAAAGTCA
CTGGAGGCAGAGATCTTCCAAGCCAATTAGGCTACCTTGTACCTCTTTTT
TACTTAGTTTTATATCATAATAAATAAAAATGATCAACACTGTTCGATTG
GCTCCACTCATGAGGCAAGCTGTAAGTATGATTTACTCCAACTTAGATGT
CAAGTATCTGTAAACATGCACCTGATTTCAATATGGTTACAGGAGGATTT
CTAAACAAACTCTGTATTGTTTTTGTTATCAGCAAAATTTACCAGAAGAG
TATGAGATTTATGGATTTTCTATTAGTATTTCATAAACTATCTGGGTTGC
TTTTGCTCAATTTTGCTCAATTGCTTAGGTTGCACCATTTGTAATTAGGT
TTCTAAACTTGGTGTCCCTTCCTTCGGGTAAATATATGTTTTGAATTTGA
ATTGAATTGAATTTGAAGAGCTCTATCACGTGATATATAGGTTTTTTTTT
GTTATTGAAGACCCACAGAAATCATGACTTTTTGGTCTTAAGATTGCCTG
AAAAAGCAAAAAAATGCAAATTACTCTTGGCGGCAATCACAAATATTTTC
ATTTTGCGTCCTCGTTGGTAGCGACTCCAGAAGTCATGCAACTTTCGTTG
ACGTCAAACCAAATGTTTCATTTTTCCGTGAACTTTGAACCCTTGGAACT
TTTATTCAATGTATGCTAAAGCGTTCCGGTTTTTACTAAATGAAAGCCCG
TGATCTTAGCTTTCCAGCGGTATATAACACTGTGGACACGGGCTAGACGG
CAAATTGGTAAAATGCCGAACGTTTTGCAACATTTTGAAAATTGTTTGCT
GACGGGAGAAAAAAAATTTACAACTATCGAAGAACAAATGTGTCTGGAAA
CAGAGGAAAATGTATTTGGAGGCTGAAACTTTGTATGTTTATCAGAAAAA
GGGTGAGGAATTCAAAAATCACAATCGCTGCTAATTCTAGTTCTTTCATT
TTCATGCAGTTTTTTTAACTTTTTTGCTTCTTTAGCATGGGAATGTCCCA
AAAAAAAAGTTTTTTTTTCTGCCGAAATGGATTTTCTTTTCATTTGGGGT
TTCTCCTTTCAGAAAAACTTATTCTTTACTCATAAGTTTTTGTTCCTCCA
TTTCCAGAGGCCCCTTGAAAATGGGTCCTACCACCTTTTTTGACTCATTT
CAACCTTTTCCAAGCTATTTTCTTCAAAAACAAAAATAAAACAAAAATAA
AACAATGCAATGTCTTCTTTTTTTCAAAAAAAGATATATCTTTCGTTATT
TTGATTTAAATATACTAAATATTTTACAAATATTTTTATATAATAATAAT
TTAACACCATCAAAGAATTCTCCCTCCAAATTTGAGGTAGAACTATATAT
AACATCATGGGGTTTTGTGAATGTGCTGGAAAGATATTGGTTCTTGAAAG
GTCAATAAATGGCCCATTTTGGATTAAAATTTGATGAAACAATGAAAATC
ACAAATATGAATAATATATTATTCTCATCGTATTTCAACATATTGCCACC
AAAACAATTATTAAATTACTAAATAAAATCATATACTGAAAAATTAGTAC
TGTTTAAACAATATGGACATTTTTTGAAAAAAATGAGAATGAAACATTTT
TGAAAAAAAATCTGTTAGTATTTTTCCTTTGGCTATTTCTAAGGTATGAC
TAAGTCTAAAATTAAATTTTAGCAGCTAAATATTACCAGATGACTTGTTT
GAACATGTCATATAAACATCAAGTTGATTGATGAACAAGTTTTGGAGAAA
AGATGATTTTAAAACGCCAACCTGGATTTTCCGTCACGGCGCAACGCAAA
CTTTAAAGTACACTAAAAAATTACCTTGGTGTTTTAGAGTGAATTCTTTT
AGTGATTCTCAACAGTCCTATAAGTCTAATATTTTAAACATTTAAAAACT
GAAAAATTTCTGCTTTGTTCAATTTTATTTAGAAATTATGATTTTCCGTC
ACGGCGCAACGGAATTTTAGACCCCCAAAAAACTCCATTGGACATCTGAA
ATGGCTTAATTTCTTCAGTAACTTCAAAATTATCAATATTTAAAAACATT
TGGTAAGGTAAACTACTTTGTAGCCTTTATATACCCATTTTGTAAAAAAT
CTTAATTTTTGTGAGCTTTCCAGGGATTTTAGCCTGGAAATCGGAAATCT
GGTCATAACTTTTCGATGGAGCATGTTCCTGCTCAGATTTTTTCACATAT
TGTTCATGAAATGATATTCTTTATGTCTATATAAAAATTTTTGACATTCT
GAAAACTTCATTTTTTGCCATTTTTCAGATTTTTTGGGACGAGCTTTTTG
CTTATTGCTAAATCAGATCTTTTTACCCTACCCACCATCCAAAGGGCTTA
TGGTGCGTTCAGCTTATCTACTCCTCGACGGGTGCGACGACAGGCGTCAG
CTAGTTTATATCCTATTTTTATCCTAGACCAGCTTTGCATATTTATGTTT
GTATTTCAGAAGTAAATAGGTGTAAATAAGATCATTTTCTTCGTTTGCTC
AAAAATTTAATCTCTACAATTGGAACTTGAAAGGTTCTCAGGCCATCATC
ATGGAAGCTTTAAAGTTTTTTTAAATTTTTTTTGCTGATAAATGGGAGCA
GTTTTTTTTTATGTATAGACAAATTTTATCAAACGATACCTTCGTAACTG
GGTATTTTATATTCACCTTTTCATATTTCTGTTTATTAAATTGATTGATC
CATCCAAAAAGGTTTATGGTGATAGTATAGTTTGGTTACAATGAAATTTT
AAAGTCCTTATTTCAAATTTACCTTCTTCAACGATATGGAAATGAGATTA
GTTTATTTAGTTCAAAATAAAAGTAATGGTATTATCAAAAGATAAGGATT
GACATCAACATTTGCAAGAAATCACCTATTTAGGACGCTTAGAAGGCAAA
AATTTTCTTTGTCGCCGAACCATTGAAACTCAATTTTTAAGACCAAAACA
GTGGTAAGGAAAAGTGCTTGGAAATTACCCTGTTTGAGCCTCGAATTGTT
CTTATCCTGTTCTTATTTATACAGAGTGTCTTCGGGACCTTGAAAACCTT
GAGTTGGGCCAACTGTTATGATCGCCATTCCTCCAAGAAGACCCCTCGCT
CTAAGCTTGGATTTTGTGGGAAAAGGCTTGAAAACAACTATCAATGTCAG
CAGCTTAAAGTAGAGAACCGCTTCTCAATAGTGTTTAGATCATTAGTGCA
TGCCTGAAATTAGCTTTAATTACAAAGTTGAATTTGATTTTGAAAACTGT
ATTGAGGGCAACCTGACAGCTTATACTTCACATTTTATAATATTGCAATA
ATCCATCCTGATGGAAATGTGCTGCCCGTAGGATTGAAATTCACGAACGT
TTATTTATTTGCAAAACATTCTTGACAAAATGGTCAATATGTGAAACTTC
TGAATATAAACTTCTGATACACTTTGCTTGATTTACTTTCACTATCAATC
GTAATTCATTTTTTGTGGGAAAAGCCAATATCAAATATAACTGATTATTT
CAAAAATATATTTCAAACCCAAAAAATTTAAAAATCCATAACTCGTAGTT
TCATGCTCTAAGCAATCATCAGATGTAACTAAAAATTAAAAAGCTGTGTG
AAAACATATGTTACAAAATTGGTAAAATGCTGATTAAAAAGTCGTAAAAA
AGTGATAAAATCGTAAAACTATGAATTGTCACGAGGGACATCAAATGTGT
CCAGAGGGACGTCTTTAAAGTTTTTTTAAAAAGAATTTGCTCATATGACG
GCACGTGGAGATTAGTTCGGTTCTTTTGTTTATAAGTTTGTCTTTGGAAG
TAATTATGCGGTACTTTTCGGTCATGCAAAGGTTGCACGATTTGGGTGAT
TGATGACTTTCCAGGATAACAGGGCGAAATGTTTTTGCGCTGTAGTTTGT
TTGTGTTGGTTCCATCTCGTTTTGAAGGTATTTTCGGTAAGGCTGATGTA
GTTGACACCCCCGTTGTCTGGGGAGGATTTTACCGTGCATTGGTATATTA
AATGCCTATCCAGACAGTTTCCGTTTAGAGGACATTCATTTTTTTTATTT
TTTTTTTTTTTATCGAGCACTCTTTGAATATGATTTCACCTTATTTGATT
AACTGATTATTTCTAAAGTTTCTACTCGGAGTGGTACCACAATTTGTCCA
CTCTTTAATCAAAATCATAAAAATGTTCATCAGGGCTACTTTTTTAACAA
CATTAGCTTGCAGCTTGTAAATTTGTTGTAGTTAACACAAAGTAGTTTAA
ACTAAAAGTTTGGTGTATTTGATATCTGGATAACCCAGTCTCACCAAAAG
ATTAAATGTAAATACATTTAGATACATCTCTTTTAATTGCAAAATTGCAA
AGACCATCAATATTCAGATTCTTATCAAGCATATTACATTTGCCAACAGC
TATCTAACTGGTCAGCCTCTACTGACGTGTCTGTATCATCATTAAAAGAT
CAACACATTTAAAAAATAAGGAGACTTTAATTGGGGTTCTGGTCCTTCTG
CACGCTATGTCATCGTAACATAAATTTTCGTACATAGTTGAGTGACCACA
GCTAATTTCATACTGGTAAAGGAAATCAATGTTGTCATAATCTACAATCC
CTGGACAGTCATAAAATTACATTCTTTCTTATTTTAGGCCAGAGTCACAA
TGCAACAAAGCAAACAAGGAGCTGGTATGTAATTATTTATGTTGTTGTAC
CAATATCAACTTTAACAAGACTAACAAGATTTAACAGTAAATGGAATGTC
GAATGCCTTCTATAACAGATATGCAAAATAGATACAATGGAAGGTTAGGG
ATAGCAGGTCAACTTTGAAAACCCCAACCCCAAAACATGATTGCTAGCAG
ATTGACAAATATGAATGGGCTCTTCCAGAAAATGTCTGTACATGGAGGTG
GAGGATATAGTATCTGGGGGTAGTAAAAAACCTTCAAGATTTGACACCCC
CCCCATATTCAAATTTTTCTTGAAAAGCCCAATGGTTTCAATCGTAATAT
AAATTAAAACAATTCATCAATGCAAGGTTGTGTCTTCTAAACGTGAACTG
ATAGTATGTGCTGAATAAACAAGTTTCTTTTATATATTTTTGTTTGTTTT
AGCTTTGGCAAGAATGCAACCTGCTGTAAGTTATACATTTTTATTCTGAT
TGGTAATTTAATCATCTATATCAATTATGGGGCCTTGAGGTGGTAAAAAG
TTTCCCTACAAAACAAGGGTCGACTAAAATATTACATTTTTCAAATGAGC
CTAGGAATGTTACAAGAGTAAAGTTGGGCTAGTTTGGTCAGCCTGTTAAG
ATATTGTGCAATGACGATTAGATGTAGGGCAGCTCAGTGTAGATTACATT
TTCTATTTTAGATTACCCAAGGACTACACACAAGTTCGGCAAATCGTGAT
ATCGAACAAGCCGCTAAATTTATTGGAGCTGGTGCTGCCACCGTAGGATG
TGCTGGTACACGTTTTTTTTTTTTTAAGAAACACACTTTTAAGAAACATG
AGGCTCAGAATGCCTAAAAATTAAGAAACATCTAAGAAACATGCTAAGGC
TGAGAATGACAAAATAACATTTTTTAATTCGGTTGTTTTTAAGAACCTTC
CAATCCAGCCTTCAATATGGCTGATTATGGTCAAAAAGTTTAGAAACATG
TAAGAAACATTTAAGGCTCAAAAGGCCGATTTCTTAAGAAACATTGAGGC
TGCTTGGTAAAACTAGTTTCTTAAAAAAAAAAAAACGTGTAAGTGTACTT
TGAAGAAAAAGTTTCTATTTCTTTTGAGGCTGGACTTCAAAAAATGCCGG
TTTGCCCTCATTTTAAGTCCAGCCTTGAAAGGTTTTATCCAAGGGGCCGT
CCACATAGTACGTATGCACTAAGGGGAGGGGGTCTTCTCAAAAGCGTATG
CTTGCATGCAGGGGGAGGGGAGGGGTCAAAGGAAAGTGTACGTACACAGA
AATTTTTCTCATAGCCCTTTTTTGCTTGTAGAATCTCTTAAAAGAGAAAA
AAGTTATTGTTCGTTATGAAAAGCAATCTTTCTCTTACGCTTCTTATACG
CATTGAGGAAAAGAAAAAGTTTCATGTATGAAATAAAGGTCCCAAACAAA
CGATTTGAATTCGAAATTTTCTTCAACTGAGGGGGGGGGGGAATGAAAAA
GTACGTACTTACCAGGAGGGGGTATAGCCATTTACGTACGCTTGCGTACA
GGGAGATGGCCCATAGTTCGTACGCACTAAAATGTCGAAAATAGAGTACC
CCCTTCCCCTTGAATTCAAAGCGTTTGGTTCGGACCTTTATTTCACACAT
GAAACTTAAACTCAATGTTCATTAAGAAACTTTTTCTTTTCCTTGATGCG
TATAAGAAGCGTAAAAGTCCAGAAGAAAACAAGCAAAGAAGGGCTATGAA
AACATTTTTCTCTGCGTACGTACATTTTCCCTTAACCCCTCCCCCTCTAC
GCAAGCATGCGCTTTTGAGAAGGCTCCTCCTCCTCCCCCCCCCCTTAGTG
CGTACGTACTATGTGGACGGCCCCATGTGGACAGCCCTCAAGTATAAGAT
TTCTTTTGGATTCAATTTTTGCAGTAAACATTCTTAGTGATCTCACAAAT
TTAAATCTCTGAAAAATTAATCTGATTTAAAGTTTTGAATAAATGTTTTG
ATTTTCCTATACTTGAATTCATTGCACTAGATGTAAAAAAGTCATTGTTT
TCCCCATTCTTTCAGGATCTGGTGCTGGTATCGGAACAGTTTTCGGAAGT
TTGATCATCGGTTATGCTCGCAACCCATCTCTAAAACCACAACTTTTCTC
ATATGCCATCTTAGGATTTGCTTTATCTGAAGCTATGGGACTGTTCTCCC
TTATGATGTCATTTTTGATCTTATTCGGTTTGTAAATGCTAATGATTTGT
AAATTGGTTAAATAGTACTACTTTCACCCACAAATAAATTGAAAATTCCC
AATTTATATATTACCTTGTCAGTCGTTACTGTTTTATTGCCTCCCTTTAC
ATCACAATCATAAATTTTCGCAAAGCATTGTGCGTTACCTACCTCAAGGA
ATTAATTTTGTCGAGCAG

Coding sequence (CDS) from alignment at sc0000005_pilon:2302503..2309670-

>MSTRG.1107.1.p1 ID=MSTRG.1107.1.p1|Name=MSTRG.1107.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000005_pilon:2302503..2309670- (Clytia hemisphaerica_ch_hm2_pilon)
GATCTGGTGCTGGTATCGGAACAGTTTTCGGAAGTTTGATCATCGGTTAT
GCTCGCAACCCATCTCTAAAACCACAACTTTTCTCATATGCCATCTTAGG
ATTTGCTTTATCTGAAGCTATGGGACTGTTCTCCCTTATGATGTCATTTT
TGATCTTATTCGGTTTGTAAATTACCCAAGGACTACACACAAGTTCGGCA
AATCGTGATATCGAACAAGCCGCTAAATTTATTGGAGCTGGTGCTGCCAC
CGTAGGATGTGCTGCTTTGGCAAGAATGCAACCTGCTGCCAGAGTCACAA
TGCAACAAAGCAAACAAGGAGCTGATGATCAACACTGTTCGATTGGCTCC
ACTCATGAGGCAAGCTGATCTGGTGCTGGTATCGGAACAGTTTTCGGAAG
TTTGATCATCGGTTATGCTCGCAACCCATCTCTAAAACCACAACTTTTCT
CATATGCCATCTTAGGATTTGCTTTATCTGAAGCTATGGGACTGTTCTCC
CTTATGATGTCATTTTTGATCTTATTCGGTTTGTAAATTACCCAAGGACT
ACACACAAGTTCGGCAAATCGTGATATCGAACAAGCCGCTAAATTTATTG
GAGCTGGTGCTGCCACCGTAGGATGTGCTGCTTTGGCAAGAATGCAACCT
GCTGCCAGAGTCACAATGCAACAAAGCAAACAAGGAGCTGATGATCAACA
CTGTTCGATTGGCTCCACTCATGAGGCAAGCTGATCTGGTGCTGGTATCG
GAACAGTTTTCGGAAGTTTGATCATCGGTTATGCTCGCAACCCATCTCTA
AAACCACAACTTTTCTCATATGCCATCTTAGGATTTGCTTTATCTGAAGC
TATGGGACTGTTCTCCCTTATGATGTCATTTTTGATCTTATTCGGTTTGT
AAATTACCCAAGGACTACACACAAGTTCGGCAAATCGTGATATCGAACAA
GCCGCTAAATTTATTGGAGCTGGTGCTGCCACCGTAGGATGTGCTGCTTT
GGCAAGAATGCAACCTGCTGCCAGAGTCACAATGCAACAAAGCAAACAAG
GAGCTGATGATCAACACTGTTCGATTGGCTCCACTCATGAGGCAAGCTGA
TCTGGTGCTGGTATCGGAACAGTTTTCGGAAGTTTGATCATCGGTTATGC
TCGCAACCCATCTCTAAAACCACAACTTTTCTCATATGCCATCTTAGGAT
TTGCTTTATCTGAAGCTATGGGACTGTTCTCCCTTATGATGTCATTTTTG
ATCTTATTCGGTTTGTAAATTACCCAAGGACTACACACAAGTTCGGCAAA
TCGTGATATCGAACAAGCCGCTAAATTTATTGGAGCTGGTGCTGCCACCG
TAGGATGTGCTGCTTTGGCAAGAATGCAACCTGCTGCCAGAGTCACAATG
CAACAAAGCAAACAAGGAGCTGATGATCAACACTGTTCGATTGGCTCCAC
TCATGAGGCAAGCTGATCTGGTGCTGGTATCGGAACAGTTTTCGGAAGTT
TGATCATCGGTTATGCTCGCAACCCATCTCTAAAACCACAACTTTTCTCA
TATGCCATCTTAGGATTTGCTTTATCTGAAGCTATGGGACTGTTCTCCCT
TATGATGTCATTTTTGATCTTATTCGGTTTGTAAATTACCCAAGGACTAC
ACACAAGTTCGGCAAATCGTGATATCGAACAAGCCGCTAAATTTATTGGA
GCTGGTGCTGCCACCGTAGGATGTGCTGCTTTGGCAAGAATGCAACCTGC
TGCCAGAGTCACAATGCAACAAAGCAAACAAGGAGCTGATGATCAACACT
GTTCGATTGGCTCCACTCATGAGGCAAGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1107MSTRG.1107Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1107.1.p1MSTRG.1107.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1107.1.p1.exon5MSTRG.1107.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1107.1.p1.exon4MSTRG.1107.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1107.1.p1.exon3MSTRG.1107.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1107.1.p1.exon2MSTRG.1107.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1107.1.p1.exon1MSTRG.1107.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:2302503..2309670 -