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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:390020..393168+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11065.10.p1 ID=MSTRG.11065.10.p1|Name=MSTRG.11065.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3149bp|location=Sequence derived from alignment at sc0000079_pilon:390020..393168+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATAAAGGGAAAGTTGGGAATGAATTATTCATATCTTATTTTCCATAAT
TtctgtgtttttcttttcaaacgcTCCCTTATTCTATTCTtgttttctcg
aatttttaattcgaaatattttcagagaataaatatattttcatcaGGTT
CTTCTACTTCGCAGTTCTTattattttgaacattttttcgtTTGAGCAGT
GTGCGACCTCTCTTGTTGTACTTAGCGAACGAGAGACTTTTCAAGTTATA
AATGTAAGTTTTTCATCAACATATTTTATGACTTACGTTTTTGCGTAGGG
GCGTAGATgaattaaaaataacttttcaagAGCAAGGATGAAGCTCGGAA
GAATACTGTAGGCATATTTAGAAGTTTCTGATTTGAGTGGGCATGATGTC
CCCTATAATAAATTTCGAGGAAAATTtacgtttttcttcttttctctttt
ctctatAACATCGCAATGACTCTAGACAGCAGgggtttttctttgttttt
tggtAGGCTGGTGAATCAAAAATTAACTCTAGTGATTTTTAGATTCTAGA
ccggcgaattcttagcaaACCCAGTGTATTGAGTAACGTAAACATATACT
TGAGGCGGCGAACCGAACTTTTCAAACggcgaattgtaatttttttcgtg
ccttggaccGGCGAAATTCGCCGTTTGCTTAGCCTAAATAAGACCCCTAT
AGATTTGAAGAAGTTTCCATGTTTTTACTTTCGCTGCAAGGTATAATACG
TAAGAAGCTAATTGTAGATTTTGATGCTTTAGGCTACATTAGTATTACAC
GAAACATATTATTAGTAATCGTAATTTTCACAAATTACGGCTTTTTGGTA
TAATGTAATTTTAATGAGTAATCTaagtttttaaactttaatCTGTAAAT
TCTGTCAATTGAGGTTTTGTGTCATTTTTATATAGCACAGATTTTAACGT
CATCTAAAATCGTATAATCTTGCGCGTAATTTCTGTGGGTTTATAAAGAT
TATAGACTTTTGTTTGTGTGCGTGAtgtattgatgacgtcagcaaatttC
AACAACTTGAACTATGGCCTTTTTTGTCTGATCTTAGTTTTTAAGTTACA
TCATCTCACTTAGAATTTATTAGTTGTCTTTTAAGTCGCTGATAGTTAAA
CACGTGTAGTTGTGTAGTTCAGCCATCTTCGTGAGGGAGCTTTTCTTCTC
AAGCTCCCAAATAACATTAATATAATATCAGTTCTTGGTGACTTAATGTA
GTATCTAGATTTTCCTTTTAATAATTCAAATttatcttcaaaattaaaat
tttatttctctTCCAGATTCAGACATCAAAACAAATGGTTGTTCAATCAA
TGGCATTTAGTTCAATCGAAGCCGCCCATCAGAAGGGTGAGGGCGGGAAC
ATGATAAATGACATCCTTCAAAAGATACAACAAAGCAGCAAAGAAACTTG
TCTTTGGGGAAAACCCTGTCTTGAAGAGAAGCGAACGGATTGTAGCGAAG
CAGTTGATAAACAAACAGTGCTGAAAAATATCGAAGCCAAAGACAGTTTT
CATTTTGATGACTTTTGGGAAGAATTAGCTTTACTTGATAACGAGGCTAG
CGTAGACGATGACGTCAACAATAATAATTTCATCGATCAAGGTTTTTCGA
TGTGTCTAGAGTCTAACGAGGAGTTACCAATAAAAACCGAAAAACGTCGA
GGAACGAGACTTGTTCGCCGACAATCTTCGGTAGATAGTGGAATCGTCGT
CCGCACACCGAGTGAAAGTTATCAAGATCGATTAGCGCTTGTCAAGTCCC
GAGTTAAACGATGCAAAACAACAGATAATGCCCTGTCTACATTACAAAGA
TCAAATTCGCTTCCTAACCTGAAGGATATAGACTTGAATAAATTCCAAAC
GATCAAATTTAAAGACTTTAAAGCAtacaaaaaagaacaacaagATAGTA
AAATAGCTGCTGAGTCAGCGAAAAAACATTCAGAAGCGAGAAAGAAACAT
AAAGACTTATTCAGTATTCGAAATTACACTCGTGGAAAATACCGTAAAAC
AAAACTCTCAGAATTGATCACCAGGAATAATACGTTCTCGATGGGTGAAG
GGCGTATGCCGCCACATAAATTGAATGGGCGTCCTCTATTCGAAGACTCG
CTTGAAGAGAACTATGTGTTATCGTTTGATATTGACTCTACAGATACGAA
AGGCGATACTTGTTTACATCACGCTTCCAGTATCGGCGACGTCGACACAG
TTCGATATCTCTTGAAAGAGGGCGGAAATGTGTGGcgtaaaaacaataac
aaactaCTCCCTATGGAGCTATCTCATGATTTTAAAACAGCAAAACTTTT
ATCCCATGCAACTATCTTTTACACGGAACCAGAAAAACAGAGACATGGTT
GTAATAATATTTCGTCGACCGTCAAATTAGCATTTGATTTGTAAATATGG
TTAAGATTTAAAAGTCTTTAATACTTCGTAgattcttttttattatttta
agttTGTTAGCCAGAGCTGTGGAAGGATTTATTTCGAGATTTAAGGTATA
ATTATAAGCGGTAGGAAATGTATActtcaatcaaattttgatttgttgta
attggtacacaacgttgtttgaatgtctaTCGAACGTCCAAATACCATTA
GATGATTTTTGAAATAGTCTAGTATTATAACGGTCTAATCCTCCTACTGG
TCTATATAGACTAAAGCTGTGAGATCATTTTCCGGTTAAACTACCGGGTT
AGACAAGAACTTTTTCTcccttgaaaaattcaaaattgtttgaccgcctc
aattttaaaataactttattttttactttaataactttaaattttattaa
attttgtatatattgtaaaaattttcagtataatgtcgtaaaattatttt
ctattcTTGGGAATTACAATAAAGATTACAGAAGTAATCCAAAAGTTgtt
tacagtatatggcccccaaaacggagacggcccccaaaacggaggttttc
attaaaatgaagattctgacttgtagatttatcagaattaaacgattttt
gtttattttgaaagaatgatggttatacttaaaaatgagcatgtttttga
tggtttgagacggattcaaaataacatatttgcgtctaaaggaaatatt Coding sequence (CDS) from alignment at sc0000079_pilon:390020..393168+ >MSTRG.11065.10.p1 ID=MSTRG.11065.10.p1|Name=MSTRG.11065.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1110bp|location=Sequence derived from alignment at sc0000079_pilon:390020..393168+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGTTCAATCAATGGCATTTAGTTCAATCGAAGCCGCCCATCAGAA
GGGTGAGGGCGGGAACATGATAAATGACATCCTTCAAAAGATACAACAAA
GCAGCAAAGAAACTTGTCTTTGGGGAAAACCCTGTCTTGAAGAGAAGCGA
ACGGATTGTAGCGAAGCAGTTGATAAACAAACAGTGCTGAAAAATATCGA
AGCCAAAGACAGTTTTCATTTTGATGACTTTTGGGAAGAATTAGCTTTAC
TTGATAACGAGGCTAGCGTAGACGATGACGTCAACAATAATAATTTCATC
GATCAAGGTTTTTCGATGTGTCTAGAGTCTAACGAGGAGTTACCAATAAA
AACCGAAAAACGTCGAGGAACGAGACTTGTTCGCCGACAATCTTCGGTAG
ATAGTGGAATCGTCGTCCGCACACCGAGTGAAAGTTATCAAGATCGATTA
GCGCTTGTCAAGTCCCGAGTTAAACGATGCAAAACAACAGATAATGCCCT
GTCTACATTACAAAGATCAAATTCGCTTCCTAACCTGAAGGATATAGACT
TGAATAAATTCCAAACGATCAAATTTAAAGACTTTAAAGCAtacaaaaaa
gaacaacaagATAGTAAAATAGCTGCTGAGTCAGCGAAAAAACATTCAGA
AGCGAGAAAGAAACATAAAGACTTATTCAGTATTCGAAATTACACTCGTG
GAAAATACCGTAAAACAAAACTCTCAGAATTGATCACCAGGAATAATACG
TTCTCGATGGGTGAAGGGCGTATGCCGCCACATAAATTGAATGGGCGTCC
TCTATTCGAAGACTCGCTTGAAGAGAACTATGTGTTATCGTTTGATATTG
ACTCTACAGATACGAAAGGCGATACTTGTTTACATCACGCTTCCAGTATC
GGCGACGTCGACACAGTTCGATATCTCTTGAAAGAGGGCGGAAATGTGTG
GcgtaaaaacaataacaaactaCTCCCTATGGAGCTATCTCATGATTTTA
AAACAGCAAAACTTTTATCCCATGCAACTATCTTTTACACGGAACCAGAA
AAACAGAGACATGGTTGTAATAATATTTCGTCGACCGTCAAATTAGCATT
TGATTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:390020..393168 + |
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