|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:342947..348967- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11064.2.p1 ID=MSTRG.11064.2.p1|Name=MSTRG.11064.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6021bp|location=Sequence derived from alignment at sc0000079_pilon:342947..348967- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAACTGTGTGTCAGTGTCTCGCAAGCTGGTCGCAGTATAAACCATTGC
GTAGAAGGTTCTAATGAGACAACTCCTAGACCGCTCAATACAGAACCGGG
TGTCCTCTGCAAAGAGCAGCCAGTCATTATCAATGTCTCACTTTCATTTT
CAGTGAACAAATAAACTGAATACTCTAGATTTATTACACAAGCATGAGTG
GACAAGGTAAGTTTAGTTTTTGTGCAATCAAAACATTAGCTTTTCAATTT
GCTAAATAAGATGGAAAATAAGGTTATAAAGCTTTGGTTGGTAAATTATA
GTTTGATACCCAGTCGATCTTGAGATATTGTGGGTTTTTTCAGGGATGGG
AAAAAGATCATGCTTTAAACAAGTCTAAGTCCAAGCATTTGAAGAAACTA
TTCGCAAATTATTGGTCAATTTAAATTTGAAGAACTTTCATAAGTTTAAT
AGCTTTCATGCCAAAATTTGGTTATAAGATAATTCTTCACAACTTTAACC
ATGTTCTTTACTTTTTCCTAATTTACTGAAACAGTAATCCTTAACTTATT
ACTTAGGACAAAAACGAGGAAATCAAGGAGGAGGTAGTGATGGTGGCGGT
AAAAAGATGAGAGCTGATTCAATCACTTTACGCTTTTTATTACAAAGTAA
AGTAAGTGTCATTTTAGGCTTCATTTCTTATCCGAATGCAGATTAAAGTC
ATTTGAATGTCCTGAAATTTTGCACTTTAAGCCATTAGCCAAAGTATTTT
GATAAGGATTTTTTTCTTTTTATAGCATGCTGGTGGAATTATTGGCAAAG
GAGGACAAACAATCAAAAGACTGAGATCAGAGGTTAGTTATGCTAACTAG
GGTGTACTCTTTTTGGAAAACTATTGTCTTTATACTCTTGTGGGTCAATT
GTCCCTTTCATTCCTTGATTTGTTACGGAGAATTTGTGATTCTTGAATGT
GTTACATAATTTTTAAAGCAATTGAAATATTTTCCAGTCTGTTTCGTATG
TTAACTGTGTTTTGTTTTCCTTTTCCCTTATCGCAACCTCACTCCTTCCA
ATCCATACTACCCAATGATGATTACCCCGATATGTTGCTGGCTCCCTCCT
TCCTGTTGCTACTATATTTTCCTAACAATATAGTACAATGCCACGGTCAG
TGTCCCTGATACCAACGCACCGGAGCGGTAGGTTCCCATCACTTCCCATT
TCATTCCTTCAGGCTGCATCATAGGGTAGCTTATGTCGGGGGAAAAAGGA
AATTGTTATCACTGCTGCATTCTGTCACAACCCTCCTCTCAAAGAAACTA
GAGGAAAGCTCAGGTATTTGCAACAAACACAGATTTATTTAAGAACTATG
GTACTAGACAAATTCTTCAGTTATATAAACACAATGTTCCTATCATGTTA
AAGGGGGCTGTGTCAGTCACTTACAAATAGTTTCTTTAAGTTATGATGCA
GCCTGATTTTCATAAACTCTAAACCTTTTTTACAAAATTTGATAAAAAGT
TTGGGTTTGCTAGCTTTTGACCAGGTTCTGGCAAAAACCTGGAAAAGTCA
ATTTTAAACATAAACGCTTTATTCTTGGGGGTTAGTTAACCTTTTTGCAC
CATGCAAAACAACAAATTTAAATTGGCGGGAGAAAATGTTACTTTAGTTT
AAATATTTTTTAAAATTTTCGGTTGGGCCAGTTGAAATGTAAGCTTCGCT
TTCCTGGGGCTCAACTTCCTATTTGGAATATGTTGTTTGATTAGAAGAAA
ACTTTCTAGCAGCTAGAGAAACAGTTTAGCAAAAGTGTGCAGTCATGACA
TGACTAAAGTGACCAAAAAATAGTTAGTTTCAGACAAGAACATAGTAAAT
CATGACTGAAATCATGCTTCATATTTTTCAGGGTTTTGTCAATTGCAGCA
TCACAAGAAAGTGCAATCAGTGTTTTGCGTGAATGTTTACCATTGTGTCA
TGAGGTAAGTTATATCTGGTCAGATATTGTGCTGTTTGCACCTTTTTGAC
CGTAGCCGCCATTGCTACCATCCTAAAACTGTACTGTCTTTTGTGAACCT
AAAGAAAATAGAAAAAAGTGTAAAAAAATGATTGCATTGAGTTTAGGATG
GTAAATTAAATAAAAAAAGTGGCACACGCCTGACCGTGCAACTATGGTTG
AAAAGGTGTATTGATTTTGATTAAATTTCTTTTTTGCTAAAATCCTAACT
TGATCTTAAATGGTGTAATTTTAGGGATACTTTGAAGTTTCAGTTTCGAT
AGTTAGTTTTTCCTTCTTGTTTTCAGCCACCATACCCAATCACTGGAAAT
AGTGAAGGAAACAGTGGTGGTAATAATCTTGAAGTCAACTTTCTCGTCCA
CTCAAGTCAAGTCGGAGGAGTCATTGGGCGGGCTGGTAGCAACATCAAAG
AGCTCAGAGAGGTAGGGCATCTCAAGCCAAAATTTTCTCTTCTTTATTTG
AATGTGTCTAATGGTTTTGCAAAGATTGAACTCCTGCAATGTTCTTACAG
GTTCCTGACCCAAATTCTGTTTGAACAGGTATGGAATCCAGAGAAATTTT
TTGTTTTCAAGTCAAAACCTTTCTGATTTCAAAACTTAAACTTTTTCTTC
AGACAACTGGTACAAGTATTAAAGTTTTCCAAGAGTGCTTACCAAATTCA
ACAGAACGTGTTGTAGCCATCGGAGCACCAAATGAAGATGGTATTATCGA
TGTCATCCATCGTGTCCTGGCCATCATGCAAGAACAACCAATCAAAGGAA
ACATTGCTTTATATGACCCTTCCATGGAACCTTGGGATCAAGGTCAGCAA
GGTAGGGAGAGATGTCTTTTAAAACCTTCTCCATTAAATTTATTATAATC
ATCAGCTTTGTTGTTGATACTTGTCTGGAATTAAAATAATATGTTAACTT
ATTTACGAAAATAAAGCTTTGTGATCTTTTCTTCAACATATTTGGATAAA
ATGAGGGTTTCAAATGGGCCAGACAAGTAGCCTGATTAGGGTTGCTTAAC
CTGAAATTTGTGATTGTATCTGTATCTGTAGGAATAGATTGTTTTCATTG
TTTTCGGAAGACTAATATGATAGCGTTGTACATCAAAAAATGATAAAACA
GTTTACTATCAAGAAATAATAAAACACAAAAATTCTACTCAATGTTTTCA
GGGTACTGTTTTTTTTTTTAATGTATTGATCGATTTATAGGTGGATATGG
AGGCGGTCAAATGCATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGAGAG
GAGGACGTGGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAACCAA
CAAGGAGGCTTCAATAATCAACAAGGTGGCTTCAATGGACCTCCACAAGT
AAGTCCATTTTACTTTGAATTAATAAACAAAAGGGCCTCTTTGCCTGCAT
TTTCACATAATGTTAATATGATAAAGAAACAACAGTCCTTAGCCTTCCTT
AGCTTGCAGCAGGCTATTTCTTATCTCTTATGAAGAATCTACGTTTCCAG
TTTACTATTTCCCATAATTTCCTACAAAAGATCAATTACTTTGCTGAAAT
TTCTTTTTTCTTTGATCGCTCGAGTATCTTGACACATTCTTCACTCTACC
CTATATTTCAGGATCAAGGTAGTTTCGGTGGATTTGGTGGTGGACAGCAA
GACTTTGGAGGAGACTTTAATCAAGGTAGTTTTACTAATATTTCCAAAAA
ATTTTATTCAGGCTCAATTGGATTATACTAGCAAGAGCTTTCAAATAAAA
AAAATGAATTACAGTAAATAGAAATGGTCATGTCTCCATTTTGTTAATAA
AACAAATCCTGTCTGTCAAATAACATCCGCTGGCAGTTCTGGTTGGGCCA
GTCTTTGATCATAGAAGCAATAAAAAGATCCATAGATGATAGTCAAGTAT
ATCTTCCTAGATTGCAATTCTCGTAAAACCTGCGGTACAAGCTGATTCAA
ATTCTTTCTTCACGTAAACAGGTGACGGTGGAAATTATGGTAAAGGAAAC
GTTGAGACGACTCAAGTCACCATTCCTAATGATGTACGTATTTTTTTTTG
CCTTTTAATTGTTTTGATTCACCCTTAGTCATGGTGAAACACTCAACTGT
ATGTGGTGTTGATAATTAATTTATAGGCCCTATTTACGTCGACCCTAATT
TAGCGCCAGTCCTTATTTTTCCATTTTTAGCCCGGCCCTAATTTAATTCC
ACTTCCTTACGCTGGCCCTATTTACGTCAGCGACAAAAAATAACACCATA
AAAAAACACAAAGAATGAAAAAACTCAATTAAACTCATCAATTTTTAGCT
TGCTGGTGCCATTATTGGTAAAGGAGGAGAAAGAATCAGGAATATCAGGT
AATTTGTTTGAGTTTTTAAAGTAGTTTAACAAAGGGTTATCTTGTAATGT
TCTTTGTTGATGTCTAATGCCTTTTACTCCAGTTAATTGTTTTGCCCTTT
CAACACTACTTTCATTGTTATTTTTTCTCTAGTTAGTGAGGGGAAAAATT
TGTATCTAAGCTACCTAGCTACATTTTTTTTGAATTGCTATTTTCCAGAC
AAAGATCAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCT
GATCGTGTCATCACCATCGCTGGAAATACAGAACAAATCCAATACGGTCA
ATTCCTAATGCAGCAGAGGTACCTTAACCTTTATGTGATAAAATCTCCTT
TCATAGTTCCCAAAGTTTCTCAGCCTTACTTCCAATATGAGAGAAATTTC
CTCTTGCTGTGGCATAGTGGTCGCTGACCTTGGTTACTGCACAGGCAATT
GAGGTTCGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAACAAACCTT
TTCCCAGGTCAACCCATGCTATGTTAGGGGAATTGGGTAGCCAGTCCAAG
GTGCTGACTTTTTGATTGCGTCTATAAATGCGAAAATTGGTCTTAGAGCC
TCCTGCAACTCAACCAGAAAGAAATGCTTGCATCTTATAAGAACATGAAA
GTCTATCTCTCCCTACCACTTCATTTGACCTGGCCATTACTTGGTAGGTA
ATGGTCTCATAAACCTATTTCCAAGTACTCTATATCCTGGCCTTAAACTT
TCCAAACATTATTTCTTCTATATTTCTGTCCTACCTTTCACGTACTCAGT
CCCAAATACTAGCACTGGCCATGAAGGGCTTCATTCCTCCCAATGACACG
GGCTTGAAAGAAAACTCACCCTACCCACTAACAAGTACTAATTTTAAGCT
ACTAGGTACTTGTTTTGCCTACCCCTATCTCAGAAAGTCCCATAGTACTA
CAAGGTTGTTAAATCTTTTAAAGCATAATGTCATTTGTTACAACAGACCT
ATGAACAACTTGTATCCCCTCTCACAATCTCATGGCTATGAGCGTATAAC
ACCCTTTAACTATGTCTGAATAGTTTATTCATTGAATGAAAGTCTTTATC
CCTACCGGTCTAAACTCTTGTTCCCACGCAATGGAAACGCTAGTACCCTT
GACCCACTACCTGACCCTACCTGACCCAAATTTCATAACAGTTTCACATA
GCTTTTCATGTCAAAAATCATACCATCGCGAGACTATGTCCATTAGTAGA
CAACTTTAAACATAAAACGCAACAATTTCTTTTTTGCAGCGTTCGCCAGT
TTTCTGGAAAACAATCATAGAACACTTGTGAATACACACACAATGAATTA
AATGTGTGTCTGAGTGAAGAGATGTTTTGGATTTTTAGTGAACTTTTTAA
AAACGTAGAGAAAGATGTAAATATATGCAAGGTGAAACGAAAGGGAGACA
TTATTTTGATGGAGTATTTCGCTCTTGGACAACGTTCTATCGAAGAATTC
ACACACTGCACAGATGGGATGAATTCACAGATTTTGACAGACGAACCGTC
GTTTTTTATGTCGATAGGATATAAATTTTCCTTTGATTGACCCTAGAGTA
ATCAATTTTATTTTGTAAACTAGTAAAATTTATCAAGGAAAAGATTTGAA
AAATTGAAAGTCAGTATGTCT Coding sequence (CDS) from alignment at sc0000079_pilon:342947..348967- >MSTRG.11064.2.p1 ID=MSTRG.11064.2.p1|Name=MSTRG.11064.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3927bp|location=Sequence derived from alignment at sc0000079_pilon:342947..348967- (Clytia hemisphaerica_ch_hm2_pilon)
CGTTCGCCAGTTTTCTGGAAAACAATCATAGACAAAGATCAGGAGCAGAC
ATCAAGATTCAAGACCCATTACCAGGAAAAGCTGATCGTGTCATCACCAT
CGCTGGAAATACAGAACAAATCCAATACGGTCAATTCCTAATGCAGCAGA
GCTTGCTGGTGCCATTATTGGTAAAGGAGGAGAAAGAATCAGGAATATCA
GGTGACGGTGGAAATTATGGTAAAGGAAACGTTGAGACGACTCAAGTCAC
CATTCCTAATGATGATCAAGGTAGTTTCGGTGGATTTGGTGGTGGACAGC
AAGACTTTGGAGGAGACTTTAATCAAGGTGGATATGGAGGCGGTCAAATG
CATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGAGAGGAGGACGTGGTGG
TGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAACCAACAAGGAGGCTTCA
ATAATCAACAAGGTGGCTTCAATGGACCTCCACAAATGCAAGAACAACCA
ATCAAAGGAAACATTGCTTTATATGACCCTTCCATGGAACCTTGGGATCA
AGGTCAGCAAGCGTTCGCCAGTTTTCTGGAAAACAATCATAGACAAAGAT
CAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCTGATCGT
GTCATCACCATCGCTGGAAATACAGAACAAATCCAATACGGTCAATTCCT
AATGCAGCAGAGCTTGCTGGTGCCATTATTGGTAAAGGAGGAGAAAGAAT
CAGGAATATCAGGTGACGGTGGAAATTATGGTAAAGGAAACGTTGAGACG
ACTCAAGTCACCATTCCTAATGATGATCAAGGTAGTTTCGGTGGATTTGG
TGGTGGACAGCAAGACTTTGGAGGAGACTTTAATCAAGGTGGATATGGAG
GCGGTCAAATGCATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGAGAGGA
GGACGTGGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAACCAACA
AGGAGGCTTCAATAATCAACAAGGTGGCTTCAATGGACCTCCACAAATGC
AAGAACAACCAATCAAAGGAAACATTGCTTTATATGACCCTTCCATGGAA
CCTTGGGATCAAGGTCAGCAAGCGTTCGCCAGTTTTCTGGAAAACAATCA
TAGACAAAGATCAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAA
AAGCTGATCGTGTCATCACCATCGCTGGAAATACAGAACAAATCCAATAC
GGTCAATTCCTAATGCAGCAGAGCTTGCTGGTGCCATTATTGGTAAAGGA
GGAGAAAGAATCAGGAATATCAGGTGACGGTGGAAATTATGGTAAAGGAA
ACGTTGAGACGACTCAAGTCACCATTCCTAATGATGATCAAGGTAGTTTC
GGTGGATTTGGTGGTGGACAGCAAGACTTTGGAGGAGACTTTAATCAAGG
TGGATATGGAGGCGGTCAAATGCATGGCGGTCGTGGTGGTGGCCGCGGTG
GTATGAGAGGAGGACGTGGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTC
AATAACCAACAAGGAGGCTTCAATAATCAACAAGGTGGCTTCAATGGACC
TCCACAAATGCAAGAACAACCAATCAAAGGAAACATTGCTTTATATGACC
CTTCCATGGAACCTTGGGATCAAGGTCAGCAAGCGTTCGCCAGTTTTCTG
GAAAACAATCATAGACAAAGATCAGGAGCAGACATCAAGATTCAAGACCC
ATTACCAGGAAAAGCTGATCGTGTCATCACCATCGCTGGAAATACAGAAC
AAATCCAATACGGTCAATTCCTAATGCAGCAGAGCTTGCTGGTGCCATTA
TTGGTAAAGGAGGAGAAAGAATCAGGAATATCAGGTGACGGTGGAAATTA
TGGTAAAGGAAACGTTGAGACGACTCAAGTCACCATTCCTAATGATGATC
AAGGTAGTTTCGGTGGATTTGGTGGTGGACAGCAAGACTTTGGAGGAGAC
TTTAATCAAGGTGGATATGGAGGCGGTCAAATGCATGGCGGTCGTGGTGG
TGGCCGCGGTGGTATGAGAGGAGGACGTGGTGGTGGTCGAGGTGGAGGCC
GTGGAGGTTTCAATAACCAACAAGGAGGCTTCAATAATCAACAAGGTGGC
TTCAATGGACCTCCACAAATGCAAGAACAACCAATCAAAGGAAACATTGC
TTTATATGACCCTTCCATGGAACCTTGGGATCAAGGTCAGCAAGCGTTCG
CCAGTTTTCTGGAAAACAATCATAGACAAAGATCAGGAGCAGACATCAAG
ATTCAAGACCCATTACCAGGAAAAGCTGATCGTGTCATCACCATCGCTGG
AAATACAGAACAAATCCAATACGGTCAATTCCTAATGCAGCAGAGCTTGC
TGGTGCCATTATTGGTAAAGGAGGAGAAAGAATCAGGAATATCAGGTGAC
GGTGGAAATTATGGTAAAGGAAACGTTGAGACGACTCAAGTCACCATTCC
TAATGATGATCAAGGTAGTTTCGGTGGATTTGGTGGTGGACAGCAAGACT
TTGGAGGAGACTTTAATCAAGGTGGATATGGAGGCGGTCAAATGCATGGC
GGTCGTGGTGGTGGCCGCGGTGGTATGAGAGGAGGACGTGGTGGTGGTCG
AGGTGGAGGCCGTGGAGGTTTCAATAACCAACAAGGAGGCTTCAATAATC
AACAAGGTGGCTTCAATGGACCTCCACAAATGCAAGAACAACCAATCAAA
GGAAACATTGCTTTATATGACCCTTCCATGGAACCTTGGGATCAAGGTCA
GCAAGCGTTCGCCAGTTTTCTGGAAAACAATCATAGACAAAGATCAGGAG
CAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCTGATCGTGTCATC
ACCATCGCTGGAAATACAGAACAAATCCAATACGGTCAATTCCTAATGCA
GCAGAGCTTGCTGGTGCCATTATTGGTAAAGGAGGAGAAAGAATCAGGAA
TATCAGGTGACGGTGGAAATTATGGTAAAGGAAACGTTGAGACGACTCAA
GTCACCATTCCTAATGATGATCAAGGTAGTTTCGGTGGATTTGGTGGTGG
ACAGCAAGACTTTGGAGGAGACTTTAATCAAGGTGGATATGGAGGCGGTC
AAATGCATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGAGAGGAGGACGT
GGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAACCAACAAGGAGG
CTTCAATAATCAACAAGGTGGCTTCAATGGACCTCCACAAATGCAAGAAC
AACCAATCAAAGGAAACATTGCTTTATATGACCCTTCCATGGAACCTTGG
GATCAAGGTCAGCAAGCGTTCGCCAGTTTTCTGGAAAACAATCATAGACA
AAGATCAGGAGCAGACATCAAGATTCAAGACCCATTACCAGGAAAAGCTG
ATCGTGTCATCACCATCGCTGGAAATACAGAACAAATCCAATACGGTCAA
TTCCTAATGCAGCAGAGCTTGCTGGTGCCATTATTGGTAAAGGAGGAGAA
AGAATCAGGAATATCAGGTGACGGTGGAAATTATGGTAAAGGAAACGTTG
AGACGACTCAAGTCACCATTCCTAATGATGATCAAGGTAGTTTCGGTGGA
TTTGGTGGTGGACAGCAAGACTTTGGAGGAGACTTTAATCAAGGTGGATA
TGGAGGCGGTCAAATGCATGGCGGTCGTGGTGGTGGCCGCGGTGGTATGA
GAGGAGGACGTGGTGGTGGTCGAGGTGGAGGCCGTGGAGGTTTCAATAAC
CAACAAGGAGGCTTCAATAATCAACAAGGTGGCTTCAATGGACCTCCACA
AATGCAAGAACAACCAATCAAAGGAAACATTGCTTTATATGACCCTTCCA
TGGAACCTTGGGATCAAGGTCAGCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:342947..348967 - |
|
