MSTRG.11052.81.p1 (mRNA) -

Overview
NameMSTRG.11052.81.p1
Unique NameMSTRG.11052.81.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:196554..197713+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11052.81.p1 ID=MSTRG.11052.81.p1|Name=MSTRG.11052.81.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1160bp|location=Sequence derived from alignment at sc0000079_pilon:196554..197713+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCAC TGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGA GGAGGAGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACT GCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAG GAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTG CGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG AGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGC GTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAA GGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCT TGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAG GTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGT GTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGG AGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTA TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGT GGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGT TACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAG GTGGTTCACTGCGTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTT ACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGG TGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTA CTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGT GGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTAC TGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTG GTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACT AAAGGAGGAG

Coding sequence (CDS) from alignment at sc0000079_pilon:196554..197713+

>MSTRG.11052.81.p1 ID=MSTRG.11052.81.p1|Name=MSTRG.11052.81.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2880bp|location=Sequence derived from alignment at sc0000079_pilon:196554..197713+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACT
GCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAG
GAGGAGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTG
CGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGG
AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC
GTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGA
GGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCG
TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAG
GAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCTT
GTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGG
TGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTG
TTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGA
GGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTAT
TACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGAGGTG
GTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTT
ACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGG
TGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTA
CTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGT
GGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTAC
TAAAGGAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAG
GTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATT
ACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGG
TGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTA
CTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGT
GGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTAC
TGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTG
GTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCTTGTTACT
GAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGG
TCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTG
AAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGT
TCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGA
ACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTC
CACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAA
GGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTC
ACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAG
GAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCA
CTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGG
AGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCAC
TGCGTGTTACTAAAGGAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAA
CGAGGAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCC
ACTGCGTATTACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTGAAC
GAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCA
CTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGG
AGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCAC
TGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGA
GGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACT
GCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAG
GAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTG
CGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGG
AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC
GTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGA
GGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCG
TGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAG
GAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGT
ATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGG
TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG
TTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGA
GGTGGTTCACTGCGTGTTACTAAAGGAGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11052MSTRG.11052Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.81.p1.exon1MSTRG.11052.81.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.81.p1.exon2MSTRG.11052.81.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.81.p1.exon3MSTRG.11052.81.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.81.p1MSTRG.11052.81.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:196554..197713 +