MSTRG.11052.65.p2 (mRNA) -

Overview
NameMSTRG.11052.65.p2
Unique NameMSTRG.11052.65.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000079_pilon:196383..198949+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.11052.65.p2 ID=MSTRG.11052.65.p2|Name=MSTRG.11052.65.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2567bp|location=Sequence derived from alignment at sc0000079_pilon:196383..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
TGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTG GTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACT AAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGG TTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTG AACGAGGAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGT CCACTGCGTATTACTGAACGAGGAGGAGGTGGTCCACTGCGTATTACTGA ACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTC CACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAA GGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTC ACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAG GAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCA CTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGG AGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCAC TGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGA GGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACT GCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAG GAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTG CGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGA AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC GTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGA GGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCG TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAG GAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGT ATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGG TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG TTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGA GGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTAT TACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTG GTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTT ACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGG TCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTA CTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGT GGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGC TGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGG GTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATT ACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGTATCGCTGAAGGAGAAAG AGGTGGTGGTCCACTGCGTATTGCTGAACGAGAAGAAGCTGGTCCACTGC GTATTACTGAAGGAGCAGGAGGTGGTGGTCCACAGTGTATTACTGAAGGC GGAGGATGAGGTGGTTCATTGCGTTTTACTGAAGGAGGAGGTGGTGGGCC ATCGCGCATTACTGGAGGAGGAGGTGGTGGTTCACTCTGCATCGCTGAAG GAGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAGGAGGAGGTGGT CGACTTCTGCTTATTTCAGTTGATGGGCATTGAGGTGAATGAGGTCATAA TGATTTTAACGAATATGTATCCTTGTAGAGGGTTGGAATTTGCAAACTTC CACTGGGTGGTGTTTTGGTTGAAGGAATGAAATTGTCTGTCGGTGGTGAT TGAGGTTATGATGTatgtgaattttctttgaatgccATGTGATCATAAGT AAGAAACTACACATAGAACGTCTGTTTGTATATGTCAACTTAAAACAGTT GCTTGATATTACATAGTAATTATTATAAAATCAAGCAAGACAAAATTGTA TTACTAGTCCAGCTAGACACAACAACAAAATTAGTACGCAGCAAAACCAA AACATACATAGCAGCAGTTCTAACCAACGTAAACACTCAAGTTTCACTTT TAATAAAAACATGCATACGCAAGAAAttaaattatgtcaaaataataTGC ATTGGAGACAAAAAGAAAGGCTGTAGCTTTTGATAGAGCtcaaattacat gttttttttttctactc

Coding sequence (CDS) from alignment at sc0000079_pilon:196383..198949+

>MSTRG.11052.65.p2 ID=MSTRG.11052.65.p2|Name=MSTRG.11052.65.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4032bp|location=Sequence derived from alignment at sc0000079_pilon:196383..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGG
TCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTG
AAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGT
TCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGA
AGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTC
CACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAA
GGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTC
ACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAC
GAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCA
CTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGG
TGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCAC
TGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGA
GAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACT
GCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAG
GAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTG
CGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGA
AGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGC
GTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGA
GGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCG
TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAG
GAGGTCGTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGT
GTTACTGAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGG
TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG
TTGCTGAACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGA
GGGGGTGGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCG
TATTACTGAAGGAGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAG
GAGGAGGTGGTCGACTTCTGCTTATTTCAGTTGATGGGCATTGAGAAGGA
GGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACT
GCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAG
GAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTG
CGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGG
AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC
GTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGA
GGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCG
TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAG
GAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGT
GTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGAGG
TGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTG
TTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGA
GGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTAT
TACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTG
GTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTT
ACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGG
TGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTA
CTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGT
GGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTAC
TAAAGGAGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGGTC
GTTCACTGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTACT
GAACGAGAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGTGG
TCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGCTG
AACGAGAAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGGGT
GGTCCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATTAC
TGAAGGAGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAGGAGGAG
GTGGTCGACTTCTGCTTATTTCAGTTGATGGGCATTGAGAAGGAGGAGGA
GGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGT
TACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTG
GTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTT
ACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGG
TGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTA
CTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGT
GGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTAC
TAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTG
GTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACT
GAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGAGGTGGTGG
TCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTA
AAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGT
TCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGA
AGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTC
CACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAA
GGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTC
ACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAC
GAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCA
CTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGG
AGGAGGTGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGGTCGTTCAC
TGCGTGTTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTACTGAACGA
GAAGGAAGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGTGGTCCACT
GCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGCTGAACGAG
AAGGAGGTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGGGTGGTCCA
CTGCGTATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATTACTGAAGG
AGGAGGAGGTGGTGGTCGACTGCGTATTACTGAAGGAGGAGGAGGTGGTC
GACTTCTGCTTATTTCAGTTGATGGGCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.11052MSTRG.11052Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.65.p2.exon1MSTRG.11052.65.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.65.p2.exon2MSTRG.11052.65.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.11052.65.p2.exon3MSTRG.11052.65.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.11052.65.p2MSTRG.11052.65.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079_pilongenomesc0000079_pilon:196383..198949 +