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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:196266..198949+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11052.20.p2 ID=MSTRG.11052.20.p2|Name=MSTRG.11052.20.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2684bp|location=Sequence derived from alignment at sc0000079_pilon:196266..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAAAAATTTATTAGTCGATGTAGCTGGAGGTGTTCCGCTATGTATTG
CTGAAGGTGGAGGAGGTGGTCCACTGCATATTACTGAAGGAGGAGGTGGT
GGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTAC
TGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTG
GTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACT
GAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGG
TCCACTGCGTATTACTGAACGAGGAGGAGGTGGTTCACTGCGTATTACTG
AAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGT
CCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTATTACTGA
AGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGGAGGAGGTGGTT
CACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAA
CGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCC
ACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAG
GAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACG
AGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCAC
TGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGA
GGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACT
GCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAG
AAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTG
CGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG
AGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGC
GTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAA
GGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCG
TATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAG
GTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGCGT
GTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTA
TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGT
GGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGT
TACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAG
GTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGCATT
ACTGAACGAGAAGGAGGTCGTTCACTGCGTGTTACTGAAGGTGGAGGAGG
TGCTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGGTCCACTGCGTTTTG
CTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGGAGGT
GGTTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGTCCACTGTGCATTGC
TAAAGTTGGAGGAGGGGGTGGTCCACTGCGTATTACTGAAGGAGGAGGTG
GTGGTCCATTGCGTATTACTGAAGGAGGAGGAGGTGGTGGTCCACTGCGT
ATCGCTGAAGGAGAAAGAGGTGGTGGTCCACTGCGTATTGCTGAACGAGA
AGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGGAGGTGGTGGTCCAC
AGTGTATTACTGAAGGCGGAGGATGAGGTGGTTCATTGCGTTTTACTGAA
GGAGGAGGTGGTGGGCCATCGCGCATTACTGGAGGAGGAGGTGGTGGTTC
ACTCTGCATCGCTGAAGGAGGAGGAGGTGGTGGTCGACTGCGTATTACTG
AAGGAGGAGGAGGTGGTCGACTTCTGCTTATTTCAGTTGATGGGCATTGA
GGTGAATGAGGTCATAATGATTTTAACGAATATGTATCCTTGTAGAGGGT
TGGAATTTGCAAACTTCCACTGGGTGGTGTTTTGGTTGAAGGAATGAAAT
TGTCTGTCGGTGGTGATTGAGGTTATGATGTatgtgaattttctttgaat
gccATGTGATCATAAGTAAGAAACTACACATAGAACGTCTGTTTGTATAT
GTCAACTTAAAACAGTTGCTTGATATTACATAGTAATTATTATAAAATCA
AGCAAGACAAAATTGTATTACTAGTCCAGCTAGACACAACAACAAAATTA
GTACGCAGCAAAACCAAAACATACATAGCAGCAGTTCTAACCAACGTAAA
CACTCAAGTTTCACTTTTAATAAAAACATGCATACGCAAGAAAttaaatt
atgtcaaaataataTGCATTGGAGACAAAAAGAAAGGCTGTAGCTTTTGA
TAGAGCtcaaattacatgttttttttttctactc Coding sequence (CDS) from alignment at sc0000079_pilon:196266..198949+ >MSTRG.11052.20.p2 ID=MSTRG.11052.20.p2|Name=MSTRG.11052.20.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3390bp|location=Sequence derived from alignment at sc0000079_pilon:196266..198949+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAAAAAATTTATTAGTCGATGTAGCTGGAGGTGTTCCGCTATGTATTGC
TGAAGGTGGAGGAGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTG
GTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACT
GAACGAGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGG
TCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTG
AAGGAGGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGT
TCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGA
ACGAGAAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTC
CACTGCTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAA
GGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTC
ACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAAC
GAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCA
CTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGG
AGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCAC
TGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGA
GAAGGAGGTGGTTCACTGCGTGTTACTGAAGGTGGAGGTGGTGGTCCACT
GCGTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAG
GAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTG
CGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGG
AGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGC
GTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGA
GGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCG
TGTTACTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAG
GAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGT
ATTGCTGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGG
TGGTGGTCCACTGCGCATTACTGAACGAGAAGGAGGTCGTTCACTGCGTG
TTACTGAAGGTGGAGGAGGTGCTCCGCTGCGTGTTACTGAACGAGAAGGA
AGTGGTCCACTGCGTTTTGCTGAAGGTGGAGGTGGTGGTCCACTGCGTGT
TACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTGCTGAACGAGAAGGAG
GTGGTCCACTGTGCATTGCTAAAGTTGGAGGAGGGGGTGGTCCACTGCGT
ATTACTGAAGGAGGAGGTGGTGGTCCATTGCGTATTACTGAAGGAGGAGG
AGGTGGTGGTCCACTGCGTATCGCTGAAGGAGAAAGAGGTGGTGGTCCAC
TGCGTATTGCTGAACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGA
GCAGGAGGTGGTGGTCCACAGTGTATTACTGAAGGCGGAGGATGATCAAA
AAATTTATTAGTCGATGTAGCTGGAGGTGTTCCGCTATGTATTGCTGAAG
GTGGAGGAGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCA
CTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACG
AGGAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCAC
TGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGA
GGAGGTGGTGGTCCACTGCGTATTGCTGAAGGAGGAGGAGGTGGTTCACT
GCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCTTGTTACTGAACGAG
AAGGAGGTGGTTCACTGCGTATTACTGAAGGAGGAGGTGGTGGTCCACTG
CTTGTTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTGAAGGAGG
AGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAGGTGGTTCACTGC
GTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAA
GGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTGGTCCACTGCG
TATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAG
GTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGT
GTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTTACTGAACGAGAAGG
AGGTGGTTCACTGCGTGTTACTGAAGGTGGAGGTGGTGGTCCACTGCGTG
TTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGT
GGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGT
TACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAAGGAGGAGGAG
GTGGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTGTT
ACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGG
TGGTCCACTGCGTATTACTGAACGAGAAGGAGGTGGTTCACTGCGTGTTA
CTAAAGGAGGAGGTGGTGGTCCACTGCGTATTACTGAACGAGAAGGAGGT
GGTTCACTGCGTGTTACTGAAGGAGGAGGTGGTGGTCCACTGCGTATTGC
TGAAGGAGGAGGAGGTGGTTCACTGCGTGTTACTAAAGGAGGAGGTGGTG
GTCCACTGCGCATTACTGAACGAGAAGGAGGTCGTTCACTGCGTGTTACT
GAAGGTGGAGGAGGTGCTCCGCTGCGTGTTACTGAACGAGAAGGAAGTGG
TCCACTGCGTTTTGCTGAAGGTGGAGGTGGTGGTCCACTGCGTGTTACTG
AACGAGAAGGAGGTGGTTCACTGCGTGTTGCTGAACGAGAAGGAGGTGGT
CCACTGTGCATTGCTAAAGTTGGAGGAGGGGGTGGTCCACTGCGTATTAC
TGAAGGAGGAGGTGGTGGTCCATTGCGTATTACTGAAGGAGGAGGAGGTG
GTGGTCCACTGCGTATCGCTGAAGGAGAAAGAGGTGGTGGTCCACTGCGT
ATTGCTGAACGAGAAGAAGCTGGTCCACTGCGTATTACTGAAGGAGCAGG
AGGTGGTGGTCCACAGTGTATTACTGAAGGCGGAGGATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:196266..198949 + |
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