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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:143060..147140- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11048.2.p1 ID=MSTRG.11048.2.p1|Name=MSTRG.11048.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4081bp|location=Sequence derived from alignment at sc0000079_pilon:143060..147140- (Clytia hemisphaerica_ch_hm2_pilon)
TCCAGAAAATTTAACTTGATATCAACTAATGCAATCAGAAAGAGTATTTT
CTCTTTAGCTTGATCCTAAAAAGACATGAAAACATCAGCAAAGCTTTTTA
CTCGAATATGAAGATGTATGAGGTAAGGGTTTCTTCATGTGTGACTAAAA
TTGAATGGAATTTTGGAAAGATTCTGTTATATTACTGTGAAATCTTAAAA
TTAAGTCAATAGAATATATTGTTTTAAATTTGATAATCGGGCGAGCTTAA
AAGCCCGAAATTCTAGAAAGAAATCTTTAACCTTTCCCAAAGAAAAAAAT
AAATCCTTGTAAGTTTTACACCGTTGGAGAGATTATTCAGAGTAGAATAT
TTTGAAAGTCAAAAGACTTGAAAATTTGAAACGTGAAGATGAAAAAAAAA
TGCGAAAAGATTTTGTTCTTTTGGTTCAAATATTATGATATTACACTTGT
TAGAACTTTTGAATCTCACTGATTTTAAATTTGTGGCCGTTTTTTTACAT
TTTTGCCCTGTACAAGCCGGGTGTGACGGTGTTATTATTTTCCAATTTTC
AGGATTCCGGGATGCAGCAAAAATTTTGACGGGAAAACGGTATTTCGAAC
CCCTACAAACCCCCCATATAAGGCTTCACTTATTCTGTCAAGGCCTTCGC
ATGTCCTCTTTTGTTCATAAATTATAGATTTTAATTCAGATCTCTGATAA
GAAGGTGGGTGTTTATGTTTTCAAAAATTGGTAGCGACCAGGTCCTGATT
ACCTTCTTCAATTTTTTTGGGAATTTATAAAACTCGTTGCATATCCCTGG
AATCAGCGATTTGTCTTGACAAACTTTTCTTGACGTCTTGACGATGACTT
TCAGAAATGCCAAATATTTATGTATTTTTCCTGACGACAGCTTTCGAAAC
ATTGAAATTTTAATACTTATTACTTTACCAGATTATCAGATTCCATTCAT
TCAATTTTATACAGTTTAATTTTCTCGCTCGTCGTCTAAGGAGATTCAAT
AGCGAGGTAAAATTTCAATAAAATCAGTTGACACTTTAGCACATAATGAT
GATGTTACGACTGAAATTAAATACTCTTACAGTGTATCTTATTCAACAAT
CTTTACAAACCTTTTAAGTCTCATTGTGTTGAAAAGAACAAATCATAGAA
TTATGAAGATATGATTTTTTTTGGTTTCATATCAAAATATATTAAGAGTT
TTGACCACTCAATTGGTCATTTTGGAGACTTGTGTAGACGGAAAACTCAT
TGAAAATTTTTTTTAAAGGTATGTACCATAAGTCTTAGCAATTTTTAAGT
TCTGCACATAATTTTTTATAAGAACGAAAGCATCCATCGTAGGGGGGGCT
TCAAAATATCTGTTCTGAAGGCACGTTCCAGCTGGATATGGTGGTCTGTT
CTTAGCGAACTAAAGAAAGTGGTCTGTTCTATTGAAGATTGTGACCAGCT
GGAAAAATATGGTCTATTCTACTGAAGATTGGGACCAGCTGGAAAAATAT
AAGCTGTTCTTATAAAAAAATATAGTATCCAAAAAACAAGGTGTCTTAAG
AATTTCCTATCTGTTCTGAGGGAATTTCAAAAAAGTCAAAAAGTCTTTGA
GATCTGTCCTTTTCCTTCTGAATGTGAAAGCTGGAAATTCTCCATCTGTG
TAGAACATCTGGAAATTGTCGATCTGTTCGCACAGATATTTAAACTGTTA
GCTGGAAATTAAGTCTCTGTTCTTAAAAGTCCTTCAATCTCGAGCTGGAA
TTTAGCGATCTGTTCTCATTTTGTCAGCCCTTGTGGATAACAGTTAACTC
GCATAAAATCAATCGCCTGGTAATTTCGTACCTGTTCCGAATGTTTTTTT
ACCTCCTAGCTGGAAAAATGCATATGTTCTGAAGTAAAAATTTCTCCCCT
GGAAAACGAGGAACTGTTCTTAATTTAAGGAAAATTCTTCCAGCTGGCAA
ATAAGAACAGATGTTTGCAAATTTTAGGCCGGTGGCTGTTTCTGTAAGAA
CAAGTGTTATTTATGAGGCCTGGTTGTTCTCATTTATTGGCACTTTGTTG
AGCCTGAAATTGTTCTTAGATTGTTCTTACTTCTAGATACAACTGAGACA
TTTTAGTTTTGATTATAAGCGTAAACTTCTTATGAACTGTTCCAGGAATC
AATTACCAAAGCAATTTTTTAAAAACGAGGTAAGCGTTGCTTGTGACGTA
ATCCATTAAAAGGTCTTATACATTAATTTTTCTTTGGCATAGGTTCCGTC
AGAAGAAGCCAATCGCAAAATGGGAATGTCTGAGAATTGGGATCGTTTTA
TCGCCATTACAAAATCAAAAGGCAAGAGCCATATGCAAGCTGCACAATAT
TGGGACAGAATGCATACATTTATCAGTCTATCAATGATCATTCTAGGTGC
AACAACAACCTTTTTATCCTTAATCAGTTCAATACCGGGTTTTGTCATCT
CCGCGTTAGCAGCCCTAGCAACTCTTATTTCCGCCATATCAGCATTTATG
AGACCTCACGATCGACGTCAACTACAAGTGGACTCGGCAAAAGAGTTCAA
AGTCTTAATGATGAAGATGGTTCGATGCGAGAAAGAACGAGAATACGAAG
ATTTGTGGAGAGAATTGAACAAAGCAATGATGGACGAGCCTTTTCTTCCA
AAGAAGTATGTCAAAGATAATCCAGAAATGGATTGGACAAAAACACCGGA
ATTACAAATTGTTATTGCTGAAAAAGAACAAGAACTTGAGGAGGTTTTAG
GTAAATCTATCCGCTGCTTTTTGAGTTCAGTATATCTGACATCACCGACT
TGTAACTTACCTGAGTATGAAATGTTATCAAACGTTAGAAAATCTGAGTG
GCCCCTCCTTTTTTGAAATTCATTCAGATTTATTGTCCTTCTATTCTTCT
TTAAGTCACATGGAAATTTCAATTACATTTCTAGGTTCAGATCATGGAGA
TGATGACGTCACAGTGAACATGAATGGAAATCAAAACATGGATGATGGGG
TGGATGTACACTACAATAATCTCGATGATAAGGCTCTGAACACACAACCT
TTCAATGACGATGACGGTTCACACAAAGAATTGATCGAGAAGTCGCCTCA
ATAAACATTTGAAAATATGTTAGAGTTAGAGTCCATAGTGTAAGTTGGTA
TTATGCTACCTTCACAGTAGCAGCAGGCACGAGAATTCAAACTACAAAAA
CGATTATAAACAACTTTATCGCCGTACCTCACAGGGAACATAGTGATTAA
CCTCCAAATAAAACGTCATATATTGATGTTCATATTACTAAAATGTTATT
ATGAAGCGTCACACACAAATGGTACTGTCAGTGTTTTTTTTTTCATAAAA
ACATTTCTTTACTACAATACAATAACGAGCATAATCACATAATATTGCTA
GCTAGCTACAAGTCATCATAACAAATTCTTGACCTAACCGCATTGTGGGC
AAACTCATCCACAATGCGATCTGCCTCATTACATACTAGTCCAAATCCAA
CTTTGCCTTCGTCCTTTTCACATCGTCTCAAATTCAAAATAGTACCCATA
TACCAGTTTGCGCGCCCACATGACGGACGCTTCAACCGTTGAGTTTCAGT
CCCGAAGGACAAAAGGCGAGACTCCAAAACAAAGGAATAACCGCTAGATA
CAATACGTCGTCATGATTGCGGTGCGTTCTATGCGCGTTTGGATTAGAAA
TTAGTAGCTTCAATTTCTCTTGCCTGAGAAGCGTTAAAGTTTTGCCTCTA
GTCCTTCGGGCTCGAAACTCAACGGGTTCAACACTTGTGGCAAGAGCACT
TATTATCTAATTGGATTATCGCATACATATTGAATCAGATTGTATTAGCT
CAAGCAAGACACGTACCTTTTACCAAAATCCTCCCTCTTATGGGTGGGAC
CGAACATGAGGTATCACAAATAAATGAAGTATAATTTTGAATTGTGTAAA
TTGTAAACCTTAGATTAAACCTTAGAACTATTTCTTTACGCAATGAATTT
TCATCCCTACTTGCAGAAAACGTTATGATAGTTCATTTGAACTGTAAACA
GTTGAAATAAATAGAATCTGTATCTCTTTAA Coding sequence (CDS) from alignment at sc0000079_pilon:143060..147140- >MSTRG.11048.2.p1 ID=MSTRG.11048.2.p1|Name=MSTRG.11048.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2079bp|location=Sequence derived from alignment at sc0000079_pilon:143060..147140- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCAGATCATGGAGATGATGACGTCACAGTGAACATGAATGGAAATCAA
AACATGGATGATGGGGTGGATGTACACTACAATAATCTCGATGATAAGGC
TCTGAACACACAACCTTTCAATGACGATGACGGTTCACACAAAGAATTGA
TCGAGAAGTCGCCTCAATAAGTTCCGTCAGAAGAAGCCAATCGCAAAATG
GGAATGTCTGAGAATTGGGATCGTTTTATCGCCATTACAAAATCAAAAGG
CAAGAGCCATATGCAAGCTGCACAATATTGGGACAGAATGCATACATTTA
TCAGTCTATCAATGATCATTCTAGGTGCAACAACAACCTTTTTATCCTTA
ATCAGTTCAATACCGGGTTTTGTCATCTCCGCGTTAGCAGCCCTAGCAAC
TCTTATTTCCGCCATATCAGCATTTATGAGACCTCACGATCGACGTCAAC
TACAAGTGGACTCGGCAAAAGAGTTCAAAGTCTTAATGATGAAGATGGTT
CGATGCGAGAAAGAACGAGAATACGAAGATTTGTGGAGAGAATTGAACAA
AGCAATGATGGACGAGCCTTTTCTTCCAAAGAAGTATGTCAAAGATAATC
CAGAAATGGATTGGACAAAAACACCGGAATTACAAATTGTTATTGCTGAA
AAAGAACAAGAACTTGAGGAGGTTTTAGATGAAGATGTATGAGGTTCAGA
TCATGGAGATGATGACGTCACAGTGAACATGAATGGAAATCAAAACATGG
ATGATGGGGTGGATGTACACTACAATAATCTCGATGATAAGGCTCTGAAC
ACACAACCTTTCAATGACGATGACGGTTCACACAAAGAATTGATCGAGAA
GTCGCCTCAATAAGTTCCGTCAGAAGAAGCCAATCGCAAAATGGGAATGT
CTGAGAATTGGGATCGTTTTATCGCCATTACAAAATCAAAAGGCAAGAGC
CATATGCAAGCTGCACAATATTGGGACAGAATGCATACATTTATCAGTCT
ATCAATGATCATTCTAGGTGCAACAACAACCTTTTTATCCTTAATCAGTT
CAATACCGGGTTTTGTCATCTCCGCGTTAGCAGCCCTAGCAACTCTTATT
TCCGCCATATCAGCATTTATGAGACCTCACGATCGACGTCAACTACAAGT
GGACTCGGCAAAAGAGTTCAAAGTCTTAATGATGAAGATGGTTCGATGCG
AGAAAGAACGAGAATACGAAGATTTGTGGAGAGAATTGAACAAAGCAATG
ATGGACGAGCCTTTTCTTCCAAAGAAGTATGTCAAAGATAATCCAGAAAT
GGATTGGACAAAAACACCGGAATTACAAATTGTTATTGCTGAAAAAGAAC
AAGAACTTGAGGAGGTTTTAGATGAAGATGTATGAGGTTCAGATCATGGA
GATGATGACGTCACAGTGAACATGAATGGAAATCAAAACATGGATGATGG
GGTGGATGTACACTACAATAATCTCGATGATAAGGCTCTGAACACACAAC
CTTTCAATGACGATGACGGTTCACACAAAGAATTGATCGAGAAGTCGCCT
CAATAAGTTCCGTCAGAAGAAGCCAATCGCAAAATGGGAATGTCTGAGAA
TTGGGATCGTTTTATCGCCATTACAAAATCAAAAGGCAAGAGCCATATGC
AAGCTGCACAATATTGGGACAGAATGCATACATTTATCAGTCTATCAATG
ATCATTCTAGGTGCAACAACAACCTTTTTATCCTTAATCAGTTCAATACC
GGGTTTTGTCATCTCCGCGTTAGCAGCCCTAGCAACTCTTATTTCCGCCA
TATCAGCATTTATGAGACCTCACGATCGACGTCAACTACAAGTGGACTCG
GCAAAAGAGTTCAAAGTCTTAATGATGAAGATGGTTCGATGCGAGAAAGA
ACGAGAATACGAAGATTTGTGGAGAGAATTGAACAAAGCAATGATGGACG
AGCCTTTTCTTCCAAAGAAGTATGTCAAAGATAATCCAGAAATGGATTGG
ACAAAAACACCGGAATTACAAATTGTTATTGCTGAAAAAGAACAAGAACT
TGAGGAGGTTTTAGATGAAGATGTATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000079_pilon | genome | sc0000079_pilon:143060..147140 - |
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