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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:76738..79336- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11044.1.p1 ID=MSTRG.11044.1.p1|Name=MSTRG.11044.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2599bp|location=Sequence derived from alignment at sc0000079_pilon:76738..79336- (Clytia hemisphaerica_ch_hm2_pilon)
CGAAATTGATTATTGATGTGTCTTTTCTCTTGAGAAAACGTACGGGATCA
ATATTTAATGAGATGCACAGCTGTGTTTTAAGATTCTCACAACATTTATA
TAAAACAATATTGTACAAACTAATACAAACTAACTCTTTAATATTTGTAG
CAGATTTTTAGGCTATAAAAACTTTGTCTCTTTTTCTTGTCTATCAGTCA
TCACAGATCTCTGCTTGCACAACGTTTTGAAGCAGTATTGTATTGAATTG
ACAGCAAAGAAGCAATGATGAAGTTGATTTTGGGGATCGTTTTTGCATTG
ATTGCATCAATCCAAGCTGATTTGAGTTGGAAAAACTGTAAGTGTCTTGC
TTGAAATTTAACAGATCGTATTTTTCCAGTCAAGTATAGATAAAACCAAT
GAAACAGATATAATTTTCTGAAGAAAAAAAGCAGATTAAAAAATTAACTT
TCCTGTAAGATCGTATCCGTTTTACAATCCTAAACAGATCATTACTATTT
CTTTCTTTGAAACTGTCTGTTTTTATCATTTACATACCAGCTAGAAAAAC
GCTCTTAACGCAGAACGTATTTAGATTTCAAGCTGGAAACATCCAGAGGT
TTTTAGTTTTAAAAAAGCTACTGTAAGATACTTCATACCGTAACATGATG
ACACTTTGCTGATGGACAAAATTTGAAGAAGGTGCACATTGATTACGTAA
CACGGGGAATTTTGGAGCTAAACCACATCACCGATTTGTTCATCAGACTC
CCCCTCAGATTCTATGACTAATGAGTTAGTTAATAAAGTATCACACTTGG
TCCATCAGACACCTTGCATTTTTTTTTTTAGTCTTTTTCGATTCCATCGT
TTTTTAATAATTGTGAAAGTTGATGAAAATGGCATTTTCTTTTTACCGAA
AATCTAAAAACCTTTCAATAATATATAGCTAATTTTGATCGTCTCATTCT
GAAATTTTTTAATGTTGCAAAAAATGAATGGTAAAAATTTGGGCAGACGT
AATAGACGTAGTAGTAGAGTAATTATGGACTAAAACTATTTAATTGTTTA
GAGCAAAATAAGGGACTCTATTTTGACATATTTTCAAAAATTAATAAAGG
GGGATCCTAATAAGGTCCGAGTGGTGTGAAAAAAAATTAACAAACGGGGG
GGGGGCTTTTATTAGGCACCTGTGGAGTAATGCCCTTCCCTGGATGTATT
TCTCTTTTTTTTATTTTCACAGGTGATAGTAAATCTTTCATTAAGATCGA
TGATATTTCACCCAGAGGAGAAATCAACAAGGATACTCAACTTAAAGCTA
AAATTACTTCCACCTCGACATACACTGATGCCAACATGAAAGCCGTTGTC
GAAGTTGTGGTGAAGAAGGACAGCTGGTTTGGTATGATTACTATTCCAAA
ATGGGTGATGGGAATTGTCGCACCTATCATCGCCGCACAAATCCCTGGAG
TCAAACACTTGAGCGGAAAGTAAGTCTTCACTTTTTTCAAGTCAATTCTC
AAGTCTAAAATCAAAAATTCAGAGTTGAATCGTTTGTTTTTTTCATGGCA
GAAGTAATTTAAAGCAATTAAAAATCGTTTTTGATGGTTTTTACAGGGAA
TTCCACTTTTTCTTCGGTTTCTTAAACATTTGGTTTTTTCCAAAAATCGT
CCGTGCCCTCTCCCCCTGTTGAGGATATCAGCCATCCATCATTCACTTTA
TTAAAGTGACCATGACCATGCAGCGTCGCTTCCTTTCTTTCAAATGCCCC
TCATAAATATCAAAACATTTAAAGGGATATTTGGCTTCTCCCGGACATAA
AGTTTTCACATTAAAATTACTGTTATTGTTTTCTAGCAAATTCGAAGTGG
GATGTGAAGCTGCCAAGAACTTTTTACCAGAATGCCCACCAAAAGTTGGC
ACATATGATGTAGGACCAGTTGACTTGAAAAAAATATTCGAGCAAGTGAA
AGCGAAAGGTGGTATCGCCGTCACTTACATTGGATCCGTAAGTTTTGTAT
TACATTTCGAATTAGGTGTACGTTTGCAAAACTTTGAAGCCTTTGGATGT
TCTTAACTTTTTGATATTCTTAGCATAATCTTATTTTCACTATTTTGTGA
GTATTTTTTTCTTATAAAAAAACGTGTATTTTCATATACATGGGGGACGA
GAAGTTTTTTTCGCGTTGGTGCAATACAACATGCTCCATCCGACCAAAAC
AAGAAAAAAAGTGCGTGTCTTAAGGTGTTTTTTTTTTATTCATAAGCCAA
AAAGTGTGGGAAATATATACCCAAAAGACACGCTGATTTTGTCCCTGGGA
CAATGGAGCAAAATTGATTCGAATCAATTTTGAGAGAGCGTTTCAGGTTG
GTGGGATGGAGCATGTTGCATTGCACCAACGCGAAAAAAACTTCTCGTAT
CCCCAAGCCTTAAAGATATTACTTTTGATTACCAAACATCAAATATTTCT
TCTTGATTTTAGGGAACTTATGAGATCAAAGCTGACGTCACTATTTCACA
GACGCAAGAAACTTTGGCTTGTTTGGAGCTCGACAACTTGAAAATCAAAA
TGTAAAATTATTTTCATAACAAGAAAAAAGAAAGTAAAACACAAAAACC Coding sequence (CDS) from alignment at sc0000079_pilon:76738..79336- >MSTRG.11044.1.p1 ID=MSTRG.11044.1.p1|Name=MSTRG.11044.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000079_pilon:76738..79336- (Clytia hemisphaerica_ch_hm2_pilon)
GGAACTTATGAGATCAAAGCTGACGTCACTATTTCACAGACGCAAGAAAC
TTTGGCTTGTTTGGAGCTCGACAACTTGAAAATCAAAATGTAACAAATTC
GAAGTGGGATGTGAAGCTGCCAAGAACTTTTTACCAGAATGCCCACCAAA
AGTTGGCACATATGATGTAGGACCAGTTGACTTGAAAAAAATATTCGAGC
AAGTGAAAGCGAAAGGTGGTATCGCCGTCACTTACATTGGATCCGTGATA
GTAAATCTTTCATTAAGATCGATGATATTTCACCCAGAGGAGAAATCAAC
AAGGATACTCAACTTAAAGCTAAAATTACTTCCACCTCGACATACACTGA
TGCCAACATGAAAGCCGTTGTCGAAGTTGTGGTGAAGAAGGACAGCTGGT
TTGGTATGATTACTATTCCAAAATGGGTGATGGGAATTGTCGCACCTATC
ATCGCCGCACAAATCCCTGGAGTCAAACACTTGAGCGGAAAATGATGAAG
TTGATTTTGGGGATCGTTTTTGCATTGATTGCATCAATCCAAGCTGATTT
GAGTTGGAAAAACTGGAACTTATGAGATCAAAGCTGACGTCACTATTTCA
CAGACGCAAGAAACTTTGGCTTGTTTGGAGCTCGACAACTTGAAAATCAA
AATGTAACAAATTCGAAGTGGGATGTGAAGCTGCCAAGAACTTTTTACCA
GAATGCCCACCAAAAGTTGGCACATATGATGTAGGACCAGTTGACTTGAA
AAAAATATTCGAGCAAGTGAAAGCGAAAGGTGGTATCGCCGTCACTTACA
TTGGATCCGTGATAGTAAATCTTTCATTAAGATCGATGATATTTCACCCA
GAGGAGAAATCAACAAGGATACTCAACTTAAAGCTAAAATTACTTCCACC
TCGACATACACTGATGCCAACATGAAAGCCGTTGTCGAAGTTGTGGTGAA
GAAGGACAGCTGGTTTGGTATGATTACTATTCCAAAATGGGTGATGGGAA
TTGTCGCACCTATCATCGCCGCACAAATCCCTGGAGTCAAACACTTGAGC
GGAAAATGATGAAGTTGATTTTGGGGATCGTTTTTGCATTGATTGCATCA
ATCCAAGCTGATTTGAGTTGGAAAAACTGGAACTTATGAGATCAAAGCTG
ACGTCACTATTTCACAGACGCAAGAAACTTTGGCTTGTTTGGAGCTCGAC
AACTTGAAAATCAAAATGTAACAAATTCGAAGTGGGATGTGAAGCTGCCA
AGAACTTTTTACCAGAATGCCCACCAAAAGTTGGCACATATGATGTAGGA
CCAGTTGACTTGAAAAAAATATTCGAGCAAGTGAAAGCGAAAGGTGGTAT
CGCCGTCACTTACATTGGATCCGTGATAGTAAATCTTTCATTAAGATCGA
TGATATTTCACCCAGAGGAGAAATCAACAAGGATACTCAACTTAAAGCTA
AAATTACTTCCACCTCGACATACACTGATGCCAACATGAAAGCCGTTGTC
GAAGTTGTGGTGAAGAAGGACAGCTGGTTTGGTATGATTACTATTCCAAA
ATGGGTGATGGGAATTGTCGCACCTATCATCGCCGCACAAATCCCTGGAG
TCAAACACTTGAGCGGAAAATGATGAAGTTGATTTTGGGGATCGTTTTTG
CATTGATTGCATCAATCCAAGCTGATTTGAGTTGGAAAAACTGGAACTTA
TGAGATCAAAGCTGACGTCACTATTTCACAGACGCAAGAAACTTTGGCTT
GTTTGGAGCTCGACAACTTGAAAATCAAAATGTAACAAATTCGAAGTGGG
ATGTGAAGCTGCCAAGAACTTTTTACCAGAATGCCCACCAAAAGTTGGCA
CATATGATGTAGGACCAGTTGACTTGAAAAAAATATTCGAGCAAGTGAAA
GCGAAAGGTGGTATCGCCGTCACTTACATTGGATCCGTGATAGTAAATCT
TTCATTAAGATCGATGATATTTCACCCAGAGGAGAAATCAACAAGGATAC
TCAACTTAAAGCTAAAATTACTTCCACCTCGACATACACTGATGCCAACA
TGAAAGCCGTTGTCGAAGTTGTGGTGAAGAAGGACAGCTGGTTTGGTATG
ATTACTATTCCAAAATGGGTGATGGGAATTGTCGCACCTATCATCGCCGC
ACAAATCCCTGGAGTCAAACACTTGAGCGGAAAATGATGAAGTTGATTTT
GGGGATCGTTTTTGCATTGATTGCATCAATCCAAGCTGATTTGAGTTGGA
AAAACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000079_pilon | genome | sc0000079_pilon:76738..79336 - |
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