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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:56856..64862+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11042.14.p1 ID=MSTRG.11042.14.p1|Name=MSTRG.11042.14.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8007bp|location=Sequence derived from alignment at sc0000079_pilon:56856..64862+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAACCAGCACTTCGATTCAACGGAGGAGGCCACGTCAATCACACCATCT
TCTGGACCAATCTCTCACCCAACGGTGGAGGCGAACCCAAAGGTAAAGAC
ACTCCTTATATGTCGGCCAGATTGGTTATTCCGAGATTAGGTTCTTTAAA
TTCTAcctgattcgcgaaaataaTTCTACGCGAAAATCTATCCACTTAAG
GTGATCTGAAACTAACTGTCCTATGATTTAAAACGTGGTCGATTTATATA
TCTGGCCTATCCAAAGATAAAGGAGAAAAAATGGATATGAGACGAGTGAA
GaagaattttattaaatttacgGTATAGGTATATATTTACAAGGTaaata
attaagaaaaaaatccacgatgagaaaaataatttacaaacattgaaaaa
tgagaaaaaatctgcaaagaaaaaacaaaattatttataaaaaagctatt
acaaaatccaaggttaaaattttttgatttttatgaaaatattaaaaaaa
cgtttgataaaaaaatatataaatatatagACACAACGGCTGATGAATGG
AATCAGAGAAATCTATGTCCGAAATATTTGGTTCGGTATGCTTCTGCTTG
TCGCCTGAAAACGTAAGAAAAGAAGGACCAACGATTAAAATATTATACAA
AAAGTCTAAGTCAAGtgccaaaaaaaaggaaaacgtcctccatttcaaaa
cttttgagttttgtctcagatacatttgctgttttacTGTATTGAAGGCA
TTGCCAGTTTAAGTTTACTTGTCCATCATCACATAGACACATTCTTGATT
GACCACTTAACCAATCAGGTCTAATTAATTAATAATGGAAACACAAAGAA
ATAAAGATTCTACTGAAATCTACTTGCTTACATGTTGTGTTTGTTTGAAC
CATCACGAAGGTTGGATGCTTCTGCAATGTCACCTGGACCATCCTCGAaa
taattttgcaaaaagttgtaaattctgaaaaacgaagaaaatgaagaaat
gagTTATCATCATTCGTTTTTGATTTATAATGTCATCCAAACATTAATCG
CGTAATTTTATCAATACAATATTCTAGCGATAAGTCAACACCATCTcggg
cctcgttttcaaatgaaatgatTACTTCAAACGACATTTACACATGTAAT
ATGTTTTCCCAAAAGaccgttttcaattttgatacagTACCGCAAACTCT
TGAAAACATCAATTATGTCTGACGACATTGAAGTATCCTGGCAACAAGTC
ATTGAGAACGAGGTTGGTAATTATTTAATCATTTTCGAGAAGAGGTGTAT
CCGATTGGAATTCGATAACTTGCTTGAACAAATACCGAAGAACAAAATCG
AAAACGGTAAAATGACAACTACTTCGAATCAAattcgacaatcaaatttt
aATTGATCAATTAGATTCGATTTAATTCGATTGGTCTGGTGTTCGTTTCT
TTTCGATTGCAATCGTGTGATAACGAATCGATTACACGGAGATGAACATA
ATCGATGACAGTCTTATTGTCGAGATCTTCGTAAAGAGGGTTCATCTGGT
GAGCCATCAATAATTGAAGAATATCTGCTCGTCCATCAATGACTGCAATG
TGAGCTGCGGTTCTATAAGTTGAAGTTGAAAAAGTTAAAGGATGGGAATT
GCATATTGATACATTTATTCCATTTTGTCATAAGACTTGAATTTGAATGT
TAACAATGTTATCTTTTTCGGCAATTGGATATGCGATTTCCTCAAAAGCC
CTGGAGAGCTATCAATATAGGAGATTATCTTCCAACTAAAGCCAAAACAA
AGCAGATATAAGTAGAAAATAATGTTGTTGCAATCACTTACCGCCCGTTG
CCTTCTCTGGCGTTCACATCGAGTCCTTGGTGCAACATGTAATCGATACA
CTTCAGAACAACGATGTGTTTATTGTTCATCAAAGCCATATGTAGAAAGC
TCATTTCGCCCAATCTGCTTTCAGTCTGTGAAGAAAATTGgatattgaaa
tttcaataagtTTCAAGTCAACATACTATTCCATTACATTAAAATAGCTA
AGATAAGAGCCTAGAAGACAAATTTTTCTGGAGTGTTATAAGCAGACTTT
GAACAATGTTAAGTGGAAGAAATTTGCCTCAATGCCTCTTGGTGATAAAC
ATGTATATCGAAGATGTCATTATGATTCAATCTAGAACCTAGGCCTCCCA
AAGGGAGGGTGCGTGCGGTGTATAACTTACGTTTGTTCTTAGTGAGACGT
CCCACAGAAGTTTGAACATCTCGAAGCGTTCATCACCATAGAAATGCAAT
AAATAAGTTAAAGCATCGCGAGAATCTTGTGCCTTGATACGTGTGTTAGC
GCCTGCTTTGATCAACGCTTTGACGCACTCGATGGAACCGACTTCCATGG
CCTAAACGAGAGAAAGTTCATCATATGTGTTAATATGGTCATTGTATAGT
GTATAGCCGGCACTCGAGAACACACTCGAtttttttATGTTAACTGGTGG
AGCCAGAATcaccgaaaagagtttacatgTTATACGATCAATTGAATCTC
CATTGAAAATACAGCTCAAAATCTCGGACAACGAATATGTCACAAAATTC
ACTGATGTAGAAGAATGTTCCTAGCTAATGGAATTGATCTTTATTCATAA
TTCtcactaaaaaaaaaacctgtcttaagaaaacctttaaagttaCTCGG
TTTTAACACCGTCAAACATAAATGACCAGTCACTTACTTTATAGAGTGGA
GTTTTGCCATGGTTGTCTTGCTTGTTGACATCGACACCAGGACATCTCAA
TAAGATATTTAAAGTTTTAATGCATCCCCAAGAAGCGGCGAAGTGCAGTG
CGGTCCTGTGAAAGTGAAGAGAGACACATTAAAAGATATAGTCCccatgg
atataaaattacctCAAATTAGAGTGCGAATACGATAAATGATGCTCAAA
AGCTTCTTCGTGTGAACAGTCCAAAATTAATACAGTCAACTCGCTTTagt
tcgaacttctattatttgaatctttctgtaatttgaactaaaatattgTT
CCCTTTTGGTTGAAAAGTAGTTTAatttactctctgtaattcgaatattt
ctccgatttgataacatttttggTCCACCGAAGATCGAATTAGACAGAGA
GAAAGTCAACCGTATTAACAATTTTTATCATCCTGGGACAAACCAGGCGA
GTAAACCTTTTGGCTTTGTTTTATAATTGTAGCATAAGACTACTCTGCTT
TGTATTTTAACCCTTCTAGCTTACTCATCAAATTCTTAGAACTATCTTTC
ATATTTTAGTCCATCATTTTACCTCTTTTGTGCGTCAACTCTGTTGATTT
TCTGTTGAAACTTATCTTCCTTCAACACCTTACGTAATTTCTTCAATTTG
CCTTTCCAGGCGAATCTAAAAGTAGAATAGtagaaagattgaaaatgaat
ctTTATTCGTATTTgtgtttgaattttctttggTCTGTCTCTACCTGGAA
CCGACCCCACATCTATACAGAATTTCTAAGGTTTTGCGTAGAATCTTTCT
CAAAAGAGACAATATATAACAAAGATTGTATGATTGTACTGCTTTAAACG
GTGTGAATTTTTGTGTACAGAATAGCAAAGCCAAAATTGACTTTCATCAA
CGAAGtttttttGTCTACCAtagtaaaaagaaattaaaagaatgatTTGT
CATTCAATAACGGACATACCTCAAAATAGCGGAAAGTTCCTCCTCTTTTA
CTGTCCAATTAGGATAACTGCCTTCTTGAATTTTTCGTCGGACGCGCGGC
TCTTCGACGTAACGTGGTGGTACACCGTAATCATACGCGTTATCGATCAA
GAACTTGCAATACGCATCTGCAGACATACGGTGACCGGCACCTTCGTCAA
TCGTCAACGCGTTCGCGACTTCGTGACGAAACTTCTCCATCAATTCTTCT
GTGTTCTCACGGCGTTCATCTAACGTCATTGCGGACGCTTCGTAACGTCG
ATGTTTCGGAACCGGAACGATTGTCCGGTTTCCAATAAATAAGCCGGTTT
GTTTTTCGCGTTCGGTTTTCTTTTTCTCATGTTGTCGCCTGAGATCAGCG
TCAAACCTTTTGCTCAGGTTATAGAAAGCACTTTTTCGTTCTTTGCCTGT
TTTTTGTGGTACGTAGACCGTGGCTCTCTTGACGGAAGCATTGACTTGCG
CTACAGCTTTATTTACTTTGTCGTTGTATGTTTCTGGATGGACAGAATAT
TTGATTGGAAGCTGTGGCAAAACTTCTTTTCGCTCACTCGCTTGATCTGT
GAAACCAAAAAGTAACGCAAAATGTTTAGATTATTGACAGTGACCTTCTT
AGGAGACACTTTAAACGTTTCTCATTTAAGTTTAGATACcactaattttt
ctttgaaacttaaaaattgCGGGGTATGTTATTTTAACAACACAATGAAA
AGGTCTCCTCACCTTTATTTTGCTTGGCAGATTTGGCAGCTTCtcgtttc
tttttcaagttttcttgaaatttatctAACGTCTTTTGGTCTTCCTCGTC
CATCTCATGAAACAACTTGCAACCGTTGCTCAATTCTCGATCCTTTACTG
GTCCATGTTCATCTGAAAGTCCATGTCCTCCGAGATAATCGTTAACAATC
GCACGGTAATGCTTGACACGTTCACCAGACAAAAGTCCTGGGTCCATGAT
ATTTGTAATACGCTCAACTTCAGTCAAACTTCGGCGAACGGAATCGAACT
GCATGAAACGCATCATGGTTTTATCCAAAGCCTCCTCGCTAATGGTGGAG
TCCAATTTCCTCAACTCATCCTTAAGCTCTGGAGTGCACAGCTCCAAGCA
TTCTTTAAACACGACTCTGGCTTTCCATTGAGCTTTAGCCTCCATTTCGA
CTTCTTTTAGATGTTTCAATTCAACATTGACTTCTGATTGAACCTCGGGC
ATTCCTGATGACTCAGGGTATTGCAAGGAAGATGTCTTCATTCGTTTCTC
AGATGGAGTTGGTCGTAAGTACAATGATGTGCTTGGTGCAACTTTCTTAG
GTTCAAGGTCATTCATGTATCGAGAGAATCTCCTTTTATGATTTGATGAT
ACCAATGTTGGTTCTTGTGATATTTTTAAACATCCAAAGACAGTAGAGTT
TGAGGATCTAGATAAATTTGGCTTACTATCTGCCATGGCTCCACTTGTTA
GACAGTTCTCATAGAAATTAACGTTGGGTTTGATGCATTGCATGGATTTC
CGTCGACCCCCGCTCAAATTGATGCGGTTCTCACGCTCTGTGGAAATAAT
ATTAAAGCATAATCAAGTTTATTTTGGTCACTTTGCTGTGAAAGAATCTG
AACTGATGTGATTTCAAGACGTCTGAGCCGTCTTGTTCTCGACCCAACGG
AACTTGGGAAATCATGCAAATTATTCGACAGCGTAAATGGATTTCATTCG
AGAAAAATAGCTCCTATTCACTCCTAAGAAAAGCAAAGAAATTAAACAAC
TTACCCATGATTTGTTCAACACGTTTCTCCATCTCTTTTACGCGACTTTG
CTTCTTAGCGTAATGTTGTTTTTCAGGCGCGTTAAAGCAGCTTTCCCACT
CTCCCTTCTCTTGCTTTTGATTCAAAAGGAAGGATCTCTCTTGAATCACC
TGTTCAACGACATCCCGCTCCTCTTGCCAAAGACCCAAGTCTTGGCACGG
caaaacaaaaacctttaaagaGTTCCTCATTTTTATGACGAACTgatggt
ttttattttgaaaaatctaaattctcTGTTCCTGCAACAGAGTCTggttg
atttttgattgaattgacttcttttaatccaattaaaatatattgcacTA
TAAATCCAACTCAAAAAgctcttttcaaacttttacggCTTGATAGGTTG
GGTTTTCGAACGAAACTGGATTGAATTCATAAAAGTCGCATTCTTtatat
tatttgacgtcaataagtttttgtgacgtcaatttttgatatCTTAAATC
AATTTCATCGAATTTTGGTATTTTCCTATCGCGAAAGTAAGTCTTTATTG
ATCAATACGGCGAAAgtctaaaaaaaatatttcttgaaaatagttttata
aaagatatttcaggatgattttaagataagaattTTAAGCGatttcaata
gattttgattgtAATCAATTTTTACAGAAGTTGGTGAAtaacaaaaaatc
gaaaaatagcTTCATTCCGATCTTGAATTCAAAAgtatttcattttattc
tcTTTATCTCTTGCAGGTGATTTGTTAGCAGCGATCGTTCGTGATTTCGG
ATCATTTGCAAACATGAAAGAACAATTGACGAATGCAACTGTTGCTGTTC
AAGGCTCCGGTTGGGGATGGCTGGTAAGTGCTGGATAACTAGTTTTTGTG
CGAAGAAGTCGCTTCGCTTTTTTCGTTTTGTTATAAATTCACGTAAATTC
AAACCCGTGAAGCACAATGTATCGCGTataatattaatatattttattgg
cccttttacgccggccctaatttaacgcgggccccttttacgccaaaatt
tgtaaaaatggctacttataCTTCAAATTCGtaaataatgtttaaaaaat
tcggTAGTAAATTGTTGAAAATCCCATTCAAAATTACTGATTTTCGTGTA
AGGTCTTAGATATGGATAATTTttgtcttcgaatcatacctaaaatcctt
taaattgaaaaataatgatagAAAATGAACGCcacttttaggtaaaaatt
gcaaaatcttggcaCTTATTACGCCACgtgcccaaaaataacgccaataa
agggccggcgtaaaaagggccgataaggtaagtcTTTGAGAACGAGGTTT
GCAattattttatgcattttcgagaagagtgtattcgcGAAAATTGCTTT
CCTTAAAAatggggggggtggaggatataacaattttcagtgatatACCC
ctcggacaaagtgacttttggctcCCCGtacaattttgatgattttccta
ccacctggacaatatatcctccaccccccatgtacggatattttctggaa
gagcccatttcgtCGGTTTTGTTATTAAAATATTAGTTTGGCCATCTCTT
TGTAACACTTCTTTCCTTGCCAACCGACAGGGTTATGATAAAAAGACTTC
GATGTTAACAATCGATGCCATGGCAAACCAAGACCCTCTACAATCGACCA
CTGGTAAGGAAATTGCATTAGTATCTTTTACAGACATTCATAAATTTTTT
AAGTATGTTTAAAGTTTTAAGCAAAATGAGACTTAATTTTCCAGCTTTAT
TATCCttggctacgtcatatcttccttcgtttccagcgtaaaactcctac
tcgagtaaggcctaaaagcctggagctgtataTTATGTAGACTATATTAT
CCCTGAAAattactgaaataaaaattatgatagAAAATGATgctaaaact
actttaaacaGGTCATTCAAGAAAATCAATGACATTAAATTAACCATTGT
TAACCCTTAGTGTCAAATCGCCACAGCCAGGATACCCATCAAAATAATAT
CATTCATTCCGTTTCTTTATTTCAGGACGTATCCCGTTGCTTGGTATTGA
CGTTTGGGAACACGCTTATTACCTACAGTATAAGAACGTTCGTCCGGATT
ACGTCAAAGCCATCTTCGATATTGTCAACTGGTCAAATGTATCTGAACGA
TACGAGAACGCTATGTGATTGTAGAGAAAGAACTTAAATTACTGTTTTCA
TTTCCTGGCTGGATTGAATGACCAGGTCAAGGGTAatctcttcaaaaaat
tttgaaaatccaggtctggatcaatttttgtaaaaaactaaatatgacga
atttaactttttttttaatttacgaattaaaatttcttcattagaaattt
tagaaagaatatatttttaacaaCTAGATATGTCAAAATATATTTCGGTT
ACTCTCTCCCCACCCATTGTCTGAACAAATACAAATACAAGGAAATGCTG
CATTGAA Coding sequence (CDS) from alignment at sc0000079_pilon:56856..64862+ >MSTRG.11042.14.p1 ID=MSTRG.11042.14.p1|Name=MSTRG.11042.14.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000079_pilon:56856..64862+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACCAGCACTTCGATTCAACGGAGGAGGCCACGTCAATCACACCATCTT
CTGGACCAATCTCTCACCCAACGGTGGAGGCGAACCCAAAGGTGATTTGT
TAGCAGCGATCGTTCGTGATTTCGGATCATTTGCAAACATGAAAGAACAA
TTGACGAATGCAACTGTTGCTGTTCAAGGCTCCGGTTGGGGATGGCTGGG
TTATGATAAAAAGACTTCGATGTTAACAATCGATGCCATGGCAAACCAAG
ACCCTCTACAATCGACCACTGGACGTATCCCGTTGCTTGGTATTGACGTT
TGGGAACACGCTTATTACCTACAGTATAAGAACGTTCGTCCGGATTACGT
CAAAGCCATCTTCGATATTGTCAACTGGTCAAATGTATCTGAACGATACG
AGAACGCTATGTGACAACCAGCACTTCGATTCAACGGAGGAGGCCACGTC
AATCACACCATCTTCTGGACCAATCTCTCACCCAACGGTGGAGGCGAACC
CAAAGGTGATTTGTTAGCAGCGATCGTTCGTGATTTCGGATCATTTGCAA
ACATGAAAGAACAATTGACGAATGCAACTGTTGCTGTTCAAGGCTCCGGT
TGGGGATGGCTGGGTTATGATAAAAAGACTTCGATGTTAACAATCGATGC
CATGGCAAACCAAGACCCTCTACAATCGACCACTGGACGTATCCCGTTGC
TTGGTATTGACGTTTGGGAACACGCTTATTACCTACAGTATAAGAACGTT
CGTCCGGATTACGTCAAAGCCATCTTCGATATTGTCAACTGGTCAAATGT
ATCTGAACGATACGAGAACGCTATGTGACAACCAGCACTTCGATTCAACG
GAGGAGGCCACGTCAATCACACCATCTTCTGGACCAATCTCTCACCCAAC
GGTGGAGGCGAACCCAAAGGTGATTTGTTAGCAGCGATCGTTCGTGATTT
CGGATCATTTGCAAACATGAAAGAACAATTGACGAATGCAACTGTTGCTG
TTCAAGGCTCCGGTTGGGGATGGCTGGGTTATGATAAAAAGACTTCGATG
TTAACAATCGATGCCATGGCAAACCAAGACCCTCTACAATCGACCACTGG
ACGTATCCCGTTGCTTGGTATTGACGTTTGGGAACACGCTTATTACCTAC
AGTATAAGAACGTTCGTCCGGATTACGTCAAAGCCATCTTCGATATTGTC
AACTGGTCAAATGTATCTGAACGATACGAGAACGCTATGTGACAACCAGC
ACTTCGATTCAACGGAGGAGGCCACGTCAATCACACCATCTTCTGGACCA
ATCTCTCACCCAACGGTGGAGGCGAACCCAAAGGTGATTTGTTAGCAGCG
ATCGTTCGTGATTTCGGATCATTTGCAAACATGAAAGAACAATTGACGAA
TGCAACTGTTGCTGTTCAAGGCTCCGGTTGGGGATGGCTGGGTTATGATA
AAAAGACTTCGATGTTAACAATCGATGCCATGGCAAACCAAGACCCTCTA
CAATCGACCACTGGACGTATCCCGTTGCTTGGTATTGACGTTTGGGAACA
CGCTTATTACCTACAGTATAAGAACGTTCGTCCGGATTACGTCAAAGCCA
TCTTCGATATTGTCAACTGGTCAAATGTATCTGAACGATACGAGAACGCT
ATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:56856..64862 + |
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