MSTRG.10926.1.p1 (mRNA) -

Overview
NameMSTRG.10926.1.p1
Unique NameMSTRG.10926.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000077_pilon:1154138..1156225+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10926.1.p1 ID=MSTRG.10926.1.p1|Name=MSTRG.10926.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2088bp|location=Sequence derived from alignment at sc0000077_pilon:1154138..1156225+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcattgATTTACTTTCagtaaataaataagaaaacaaaaataaattaaa
aatgtcAGCAATCAGTGAAAGTCAGATGTTGGACGAAGCAGAATCAAAAG
TTCATTACAGGGAAGAGATTGCTAAATATTACCTGAAAAAGCATCGAATC
ACCGATTTATTTGACAATATCACCGCCGCTCTCGTTTATCAACGGCCAGG
TAAGTCAAACCACGTCTTTCTAATGCTTTTGTTTTCAGATAAGGATTATA
TAATTGATATATAAGTATCCTGTCTCACTGACGAAGCTTTTTACCCAGTG
TGTATCAAAAGAAAGGAGCCGACGAAAAGAGGtgggaaatttcttttttt
ccgtTCTTTCCGACATGTATTTTTACCAGCGGTTATAAAAGTTTACTGTA
TAATAATAGTGTGAAGCGTATTTTTTCCAGATGATTTTTTAGGATATTCT
TTTATTACCGGGAGAAGGCACTTTCATGCCTGTGATTCGAATGCATTAAt
ttttttGCGCTCGGATTTCCAAAAGTCTTattcgtgtattttacagacga
CCCAAAAGAATTCATGATCGATTATATCAAGAAATTAAGAGACTCGAAAG
CAGCCAAGTTAGATTATCCAAGTTTGTTTGACGAAACCAATGTACGGTCC
TTATTTGGTATCATGGACCCAGCTAAGAAAGGTTATATCAATCATTCGCA
ATATAAATCAGGTATGctttaaattttagaataatATCTTTGGGTTACTA
GAGGTAACTCATTTATATCAACTCGATTACGGTATTATGTCCTTAGTTTA
AATCATTATTGTGAGCACGTTTTCATCGAAATGAATATTTTGTAGAATAT
TGTGCTTGTGtattttcgattgttttttaactttttcttcgTTAATCGTG
TATCCAGGCATGGAAAATATTGGAGTGTCGACTTACGAGAGAAATCCACC
AGGTTCAGACGAAGATCAAATTGGACTTGATGTTTTCGTCATAGAAGCGT
AAGTTATCCCCTCCTAAATATTTATGGTCTTAATTATGATAAAAATCTAC
TTTTAGTCCCTGTGTTATTTGAAGTTAACAATTAACCTGATTTTTAGCCT
CCTAATAAAATGCTAAATCTCGGGGAATTAGTCCTGCTAAAGGTCCCAAA
GTTTCCaaagtttttggcttttttcctcAGATTCTgatcaattaaatttt
tagaaattaagTAGCACATACACGTCGGGATGTGCCGCTTATATGATGAA
CAATGTCAAAAAAGTGACCCAGAATAGGATTGTAATCCAAAGTTTCTATT
TTTACTAAAAGGCACCCTAGGAGTGACTGAATTTTACTACCTACTTTGGA
CACGTAGACATGACCTGCGGCACACCCCGTACTTCTTTTGGACTCAGTGC
ACAGCTCGGAACCAGGaaatattatttgaattttttctgttgatgttttt
ctttcagGAAAGAAGGGCTGAAGGTTTCTAATGCAACTTTTTCACCGAGC
TAGGTGACCAGAGCTACATCATCCATCTATTGTACTTGTAAATAGGTTTC
ATTTGTTTTAAATTGTAAaacttttgtaaataaaaagtaatggcaagttt
taattttcatttctcattAACTGGTATAGTAGGCCCTGTTGCAACCGCGT
TGAGATCTGTACAGACGGTCACGGATCGTTCATTTTTATAGCTGATCTAT
GGAGGAAGGGTTGATTAGCGCTTTGATACAAACAACAAACTCTCTACTTA
CATATGAAAGACTAGAggggggggATTCACTCTTTCTTGTGCAAAATATG
CTCGATAGGCTATCAACTATCTAACCAATTCGCATCATATGGCATTTCGC
CCGGGCGGAAGAAAGTAAGTACCAATTAAGTTATGCAAAGAATAACACTA
GAGCACTTTTACCTATAAACAAGATTCGCAAATATGCGACAAAATATTTC
CCAACAAcagcttttaaaattgtaattgaaattatttctaacgatgaaac
aaaaattcttgtccTTACTTCTTCTTATTCCTTAACTCTATCAATCACTG
TAAATAAAGTTATCAAATAAATATACTATAGAAAAGAG

Coding sequence (CDS) from alignment at sc0000077_pilon:1154138..1156225+

>MSTRG.10926.1.p1 ID=MSTRG.10926.1.p1|Name=MSTRG.10926.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000077_pilon:1154138..1156225+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcAGCAATCAGTGAAAGTCAGATGTTGGACGAAGCAGAATCAAAAGT
TCATTACAGGGAAGAGATTGCTAAATATTACCTGAAAAAGCATCGAATCA
CCGATTTATTTGACAATATCACCGCCGCTCTCGTTTATCAACGGCCAGac
gaCCCAAAAGAATTCATGATCGATTATATCAAGAAATTAAGAGACTCGAA
AGCAGCCAAGTTAGATTATCCAAGTTTGTTTGACGAAACCAATGTACGGT
CCTTATTTGGTATCATGGACCCAGCTAAGAAAGGTTATATCAATCATTCG
CAATATAAATCAGGCATGGAAAATATTGGAGTGTCGACTTACGAGAGAAA
TCCACCAGGTTCAGACGAAGATCAAATTGGACTTGATGTTTTCGTCATAG
AAGCGAAAGAAGGGCTGAAGGTTTCTAATGCAACTTTTTCACCGAGCTAG
atgtcAGCAATCAGTGAAAGTCAGATGTTGGACGAAGCAGAATCAAAAGT
TCATTACAGGGAAGAGATTGCTAAATATTACCTGAAAAAGCATCGAATCA
CCGATTTATTTGACAATATCACCGCCGCTCTCGTTTATCAACGGCCAGac
gaCCCAAAAGAATTCATGATCGATTATATCAAGAAATTAAGAGACTCGAA
AGCAGCCAAGTTAGATTATCCAAGTTTGTTTGACGAAACCAATGTACGGT
CCTTATTTGGTATCATGGACCCAGCTAAGAAAGGTTATATCAATCATTCG
CAATATAAATCAGGCATGGAAAATATTGGAGTGTCGACTTACGAGAGAAA
TCCACCAGGTTCAGACGAAGATCAAATTGGACTTGATGTTTTCGTCATAG
AAGCGAAAGAAGGGCTGAAGGTTTCTAATGCAACTTTTTCACCGAGCTAG
atgtcAGCAATCAGTGAAAGTCAGATGTTGGACGAAGCAGAATCAAAAGT
TCATTACAGGGAAGAGATTGCTAAATATTACCTGAAAAAGCATCGAATCA
CCGATTTATTTGACAATATCACCGCCGCTCTCGTTTATCAACGGCCAGac
gaCCCAAAAGAATTCATGATCGATTATATCAAGAAATTAAGAGACTCGAA
AGCAGCCAAGTTAGATTATCCAAGTTTGTTTGACGAAACCAATGTACGGT
CCTTATTTGGTATCATGGACCCAGCTAAGAAAGGTTATATCAATCATTCG
CAATATAAATCAGGCATGGAAAATATTGGAGTGTCGACTTACGAGAGAAA
TCCACCAGGTTCAGACGAAGATCAAATTGGACTTGATGTTTTCGTCATAG
AAGCGAAAGAAGGGCTGAAGGTTTCTAATGCAACTTTTTCACCGAGCTAG
atgtcAGCAATCAGTGAAAGTCAGATGTTGGACGAAGCAGAATCAAAAGT
TCATTACAGGGAAGAGATTGCTAAATATTACCTGAAAAAGCATCGAATCA
CCGATTTATTTGACAATATCACCGCCGCTCTCGTTTATCAACGGCCAGac
gaCCCAAAAGAATTCATGATCGATTATATCAAGAAATTAAGAGACTCGAA
AGCAGCCAAGTTAGATTATCCAAGTTTGTTTGACGAAACCAATGTACGGT
CCTTATTTGGTATCATGGACCCAGCTAAGAAAGGTTATATCAATCATTCG
CAATATAAATCAGGCATGGAAAATATTGGAGTGTCGACTTACGAGAGAAA
TCCACCAGGTTCAGACGAAGATCAAATTGGACTTGATGTTTTCGTCATAG
AAGCGAAAGAAGGGCTGAAGGTTTCTAATGCAACTTTTTCACCGAGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10926MSTRG.10926Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10926.1.p1MSTRG.10926.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10926.1.p1.exon1MSTRG.10926.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10926.1.p1.exon2MSTRG.10926.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10926.1.p1.exon3MSTRG.10926.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10926.1.p1.exon4MSTRG.10926.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000077_pilongenomesc0000077_pilon:1154138..1156225 +