|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:1129892..1133631- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10924.7.p1 ID=MSTRG.10924.7.p1|Name=MSTRG.10924.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3740bp|location=Sequence derived from alignment at sc0000077_pilon:1129892..1133631- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAGATGTAAATACAAGATTTAAAATGTTCTAGTCCATATCAAAAGCAA
ACTCCATGACTAGAACTAAAAAAACAAACACAATTCAAGATGACTTAAAC
TCAAAATTTCCAAATAATGGACAGCTACTCAAGTGATAGTAGCTTTAGCA
CTTTCCAAAGTGAAACCAGCAGTCTCAGTGATGCAAATTCGTCACACTTA
TTTTCTCAACGCAGTAGTGGAAGTGCAAGTGGAGGGGGCAAGCAAACAAA
TGTCAAGTGTCGTTATTTTATGAACAATGGGTATTGTTTTTATGGTGACC
AATGTCAATTTTCACATATCAGGCCTGGTGGTGCTAGTCCTTTGACGCAC
CAAAATCATGAAAGCTATGCAAGTACAAGTGAAGGTTGGCTTTCTTACTT
ACAAACAAACTTGATTCTAACTGATTCTACCACTGAGCTGCTACTGCTAC
GAGTACTCTAATTGCACTGTGGGTCAAAACATTCCTAAATAGAAAATTTC
GTTGAATCAACCAACATCAAGTAGTGTTACCATTAAGGTAACACTTTTCT
GATAACTCCGATCAAAATTGGCTAAATCCTCGGTTTATAAAGGTCAGCAC
ATAATCATGGTTTCAGCCCCCCCCCCCCCGCCTTGTTAGGGATTGGGGGC
TAATATTTTGCAATTCTTTGGGGTTACCTATTCATTGGGGGTACCTAGCT
GTTTTGATGGAGGCTCTTGGGGCTGTGTATATTTTCCAAATTAAACATTT
CAAAATTTTCAAATTATTCAGTTTTTTTACACCAGCACCCAGTTTCCCCA
TCCGATTCTCTTGTTTCTTTTGTTTCCCATCACGTCATCTTTTACTATAT
TTTTCAAATGTGATTGTTTTTATTTATAGCCGCCATCTTTATAGCATAAA
AACAAAGCTTTTCTCATGCTTCAATGGGGGCACCTGAAAAGTGGGCTGAA
ACCATGATAGGTCGACACATAGATTGTTGTGTCTGGCATATTATTGTTGA
TAGTTAAACTTTTACACAACTGAAATAAAAGAAAAGAAAACCAGAAAGTT
TATAAGAAGAGAACCTTCCTTCCAATAAATCTTTAACCACAGTGATTTGT
TTTACATTTTGTAGATGATTCTGCTTTCCTACCATCTGCACCAACTTTTG
TTCCCAAACAACCGCAATCACCTCCACAACCACCTCCACAACCACAACCA
CAACCACAACCACAACAACAGCAACAGCATCAGCATCAGCATCAACCACA
ATCGCTGCAATCAAAATTTAATGATCATCATTCAAAAAGACTTTTCAACA
AACAATTTCCTTCGTCAAATAAACCTCCAAGCAATACTGATTTGTTAAAT
CAGCAATTTCGAAGAATGAGGATAATGCAACAAGCCAATGTAACTTGATT
ATGCTTTCTTTTGTACTGCTATTGGGCAGCCATCTTTTTAATCGCATCAG
TACAGTTTTCGTTCATGTTCCCTATATTTTCTTTGCATCAAATGCAATCC
TTTCTAACATGACCATGTCAAGATAACCTTCTAAGACATCATCTTCCTTT
TTTATGGTTTTTTTTTTTAGAGTAAAGATTCTCAAGAGAACTTTCAACAA
AATGATAGAGGGAACAAAACTCTGCCGCATCTACAGATACCTTCCAACAA
ATTTGATCAAACATCTTTCTTTATGTCTCAGCAAATGAGAATGGTCTGTC
TTATCATCTTTTATTTTTTATTTATTTTTTGTGTATCCTTTGAGTTTCTC
CCATAGTCTCAAAGATATCTAAACTTAGTTGTTTGTCCATTGTTATTAGA
CAATCTTCAATTTTCATTTACTCTCAGGAATTACTCAAACAACGCTCAGT
TCTGTTGTCAGAAAACAAAGATCTTGCTGGGCTTGGTAGGTTGAAATCTT
CCTAGCAGTCTGCTCAACCAAATCTTCAAGATTGTTTTTTTGCTTGTTTA
ATCTTGGTACAAACTTTAATTTTCACCATTAATAAAAATGTACTCTTTCA
TCGTAGGACTCCCAGAAAATATTGAAAACTATCACAGCCTTCATCCTTTA
GAAGATATCAAAAGCCAAATTTCAGTAAGTTGGGCACTCTAAAGATTTCT
GTCTGCATAGAAGAAATCTAAATACTAATTTCGAGCAAAAAATAGCAAAA
TTTTCAAATAATGGGAGCTAATTTCCTTGAAATCATACCTCTAAGTCCCC
AATAATGAGGTTAATGTTAAAGTGAGGTTCCAAAGATAAGTAACAGCTGG
TAAATCTTGTATTTTAGGCATCTCAGTCAACTTATTATTTAAGATTATTA
ATTAAAATTAAAATCGTAAAGAAAATACAGAACACAGAAAATCACAATTT
TTTTAAAAGATTCAGTTTTTCTCATTTTTCAGGGACAAAGACTCTTTGGA
TATACTTCAACTTGTTATAGAGTTGTCAATTCTAAAGATGGCCTCCATTA
CTGTATGAGAAGGATACATGGTAAGAAGATATTCTATTTTTTTTGAAAAA
TCTCACAAACTAGGGAAAACTTGATGCAATAAAGATTTTCTTTGCATAGT
TTTTTTATCCTCACGCTTTGATCTATTGTATTGTAATGTCTATATTTCGA
TTCCTTTTCAGGTTTTCGCTTATTGAATCCAAAGGCTGTGAGCAGTGTTG
AGAAATGGAAGAAAGTTAGCAATTCAAATATTGTGCCTTTGAAAGAAGCT
TTCTCATCTAAAGCATTTAATGACACATGTGAGTATTTGTAGTACTTCTT
GAAAGTTGCTCTAAATTCAGTAAAATACATATTTTGATTATGAGCACTCA
TAAGATTCTTGGATATAAATTTTAAAAGTTATCTTTCATCACAAAATAAA
AAAGTACACTACTCCGAGTTTCATGCTTACTGCACTTGTCAAATGTACAA
ATAAAATGAATCTGTTTTGAAATTCTCATTTAAAAAGCTAAAAAATGTTA
AAAAGTTGAAATAATTGGTGCGATAAAAAATTGATGTGCGTATAAAAGGG
TAATAAAAGGTAGATAAAAGGAATGCATAAAAATTCTATCATTAGTCCGG
TGGGACTGCTTTGAAGTTTTTCAGTAGAAATTTATTTAAATGACGGCATT
TTGATACTAATTCCGAACGTTTATTAATCAGGTCAAGTTCTGACGTCATA
ATGTGATATTTCTCTGTCAGGCACAAATTACATCGTTTTGAGCCATTTAC
ATAAGGACGGGCGTGGTCAATTATTTCCCAGTTCAATTTAGGGGAGATAT
CCTTCAATTGGAGGTCCCACACGTAGTTTGAAAGTTCGGTTGATTTCTTC
TTGTCTTCATTCCTGAACGTATGTTTTTGCCTTCCTCGGTATCGATGAAC
GTATGTTTGTGGCCATACCAACGTTGTTTGAAAGAATTGGCAGTTAAACC
AATGTAGTGTTTGCCTTCCTCGGTATCGAAAATTTAAATTGGCTCTGATT
TCATTGAGCACTCTGCAGCATCAATCACAAACAAATCGATTCTTGGATAT
AATTTAAATTAACTTTTTCCAAATTGATACACAGCTCGTTCAATTTTCAG
CTTTGATTTTCATCTATCAATATTACCCTGGTGCAGAGACTGTAATGGCA
AGACATTTCAAAAATATCAATACAACAAGAAGTCCCCACTCTGAATCAGC
CTTCTGGCATGGAGGGAATCAAAATTCCTCTGGATCAAGTTTTGGTGGTA
AAGTGACACAAAAAGTGATGCCTGAGCGTTTGATATGGAG Coding sequence (CDS) from alignment at sc0000077_pilon:1129892..1133631- >MSTRG.10924.7.p1 ID=MSTRG.10924.7.p1|Name=MSTRG.10924.7.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2844bp|location=Sequence derived from alignment at sc0000077_pilon:1129892..1133631- (Clytia hemisphaerica_ch_hm2_pilon)
GACTCCCAGAAAATATTGAAAACTATCACAGCCTTCATCCTTTAGAGTAA
AGATTCTCAAGAGAACTTTCAACAAAATGATAGAGGGAACAAAACTCTGC
CGCATCTACAGATACCTTCCAACAAATTTGATCAAACATCTTTCTTTATG
TCTCAGCAAATGAGAATGATGATTCTGCTTTCCTACCATCTGCACCAACT
TTTGTTCCCAAACAACCGCAATCACCTCCACAACCACCTCCACAACCACA
ACCACAACCACAACCACAACAACAGCAACAGCATCAGCATCAGCATCAAC
CACAATCGCTGCAATCAAAATTTAATGATCATCATTCAAAAAGACTTTTC
AACAAACAATTTCCTTCGTCAAATAAACCTCCAAGCAATACTGATTTGTT
AAATCAGCAATTTCGAAGAATGAGGATAATGCAACAAGCCAATATGGACA
GCTACTCAAGTGATAGTAGCTTTAGCACTTTCCAAAGTGAAACCAGCAGT
CTCAGTGATGCAAATTCGTCACACTTATTTTCTCAACGCAGTAGTGGAAG
TGCAAGTGGAGGGGGCAAGCAAACAAATGTCAAGTGTCGTTATTTTATGA
ACAATGGGTATTGTTTTTATGGTGACCAATGTCAATTTTCACATATCAGG
CCTGGTGGTGCTAGTCCTTTGACGCACCAAAATCATGAAAGCTATGCAAG
TACAAGTGAAGGACTCCCAGAAAATATTGAAAACTATCACAGCCTTCATC
CTTTAGAGTAAAGATTCTCAAGAGAACTTTCAACAAAATGATAGAGGGAA
CAAAACTCTGCCGCATCTACAGATACCTTCCAACAAATTTGATCAAACAT
CTTTCTTTATGTCTCAGCAAATGAGAATGATGATTCTGCTTTCCTACCAT
CTGCACCAACTTTTGTTCCCAAACAACCGCAATCACCTCCACAACCACCT
CCACAACCACAACCACAACCACAACCACAACAACAGCAACAGCATCAGCA
TCAGCATCAACCACAATCGCTGCAATCAAAATTTAATGATCATCATTCAA
AAAGACTTTTCAACAAACAATTTCCTTCGTCAAATAAACCTCCAAGCAAT
ACTGATTTGTTAAATCAGCAATTTCGAAGAATGAGGATAATGCAACAAGC
CAATATGGACAGCTACTCAAGTGATAGTAGCTTTAGCACTTTCCAAAGTG
AAACCAGCAGTCTCAGTGATGCAAATTCGTCACACTTATTTTCTCAACGC
AGTAGTGGAAGTGCAAGTGGAGGGGGCAAGCAAACAAATGTCAAGTGTCG
TTATTTTATGAACAATGGGTATTGTTTTTATGGTGACCAATGTCAATTTT
CACATATCAGGCCTGGTGGTGCTAGTCCTTTGACGCACCAAAATCATGAA
AGCTATGCAAGTACAAGTGAAGGACTCCCAGAAAATATTGAAAACTATCA
CAGCCTTCATCCTTTAGAGTAAAGATTCTCAAGAGAACTTTCAACAAAAT
GATAGAGGGAACAAAACTCTGCCGCATCTACAGATACCTTCCAACAAATT
TGATCAAACATCTTTCTTTATGTCTCAGCAAATGAGAATGATGATTCTGC
TTTCCTACCATCTGCACCAACTTTTGTTCCCAAACAACCGCAATCACCTC
CACAACCACCTCCACAACCACAACCACAACCACAACCACAACAACAGCAA
CAGCATCAGCATCAGCATCAACCACAATCGCTGCAATCAAAATTTAATGA
TCATCATTCAAAAAGACTTTTCAACAAACAATTTCCTTCGTCAAATAAAC
CTCCAAGCAATACTGATTTGTTAAATCAGCAATTTCGAAGAATGAGGATA
ATGCAACAAGCCAATATGGACAGCTACTCAAGTGATAGTAGCTTTAGCAC
TTTCCAAAGTGAAACCAGCAGTCTCAGTGATGCAAATTCGTCACACTTAT
TTTCTCAACGCAGTAGTGGAAGTGCAAGTGGAGGGGGCAAGCAAACAAAT
GTCAAGTGTCGTTATTTTATGAACAATGGGTATTGTTTTTATGGTGACCA
ATGTCAATTTTCACATATCAGGCCTGGTGGTGCTAGTCCTTTGACGCACC
AAAATCATGAAAGCTATGCAAGTACAAGTGAAGGACTCCCAGAAAATATT
GAAAACTATCACAGCCTTCATCCTTTAGAGTAAAGATTCTCAAGAGAACT
TTCAACAAAATGATAGAGGGAACAAAACTCTGCCGCATCTACAGATACCT
TCCAACAAATTTGATCAAACATCTTTCTTTATGTCTCAGCAAATGAGAAT
GATGATTCTGCTTTCCTACCATCTGCACCAACTTTTGTTCCCAAACAACC
GCAATCACCTCCACAACCACCTCCACAACCACAACCACAACCACAACCAC
AACAACAGCAACAGCATCAGCATCAGCATCAACCACAATCGCTGCAATCA
AAATTTAATGATCATCATTCAAAAAGACTTTTCAACAAACAATTTCCTTC
GTCAAATAAACCTCCAAGCAATACTGATTTGTTAAATCAGCAATTTCGAA
GAATGAGGATAATGCAACAAGCCAATATGGACAGCTACTCAAGTGATAGT
AGCTTTAGCACTTTCCAAAGTGAAACCAGCAGTCTCAGTGATGCAAATTC
GTCACACTTATTTTCTCAACGCAGTAGTGGAAGTGCAAGTGGAGGGGGCA
AGCAAACAAATGTCAAGTGTCGTTATTTTATGAACAATGGGTATTGTTTT
TATGGTGACCAATGTCAATTTTCACATATCAGGCCTGGTGGTGCTAGTCC
TTTGACGCACCAAAATCATGAAAGCTATGCAAGTACAAGTGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000077_pilon | genome | sc0000077_pilon:1129892..1133631 - |
|
